; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0016580 (gene) of Snake gourd v1 genome

Gene IDTan0016580
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionEpidermal patterning factor-like protein
Genome locationLG06:3066706..3067650
RNA-Seq ExpressionTan0016580
SyntenyTan0016580
Gene Ontology termsGO:0010052 - guard cell differentiation (biological process)
GO:0005576 - extracellular region (cellular component)
InterPro domainsIPR039455 - EPIDERMAL PATTERNING FACTOR-like protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0058756.1 EPIDERMAL PATTERNING FACTOR-like protein 4 [Cucumis melo var. makuwa]7.6e-2456Show/hide
Query:  MAFSMSLPCSFKMALTVAFFFFFFFFTFLPSKS------------------------EKKMVIGSRPPGCENKCKSCRPCMAAAVVPVH----KAF--FG
        MA  +SL  S K+ALT+A      FF+FLP  S                         +KMVIGSRPPGC NKC +CRPCMAAAVVPVH    KAF  F 
Subjt:  MAFSMSLPCSFKMALTVAFFFFFFFFTFLPSKS------------------------EKKMVIGSRPPGCENKCKSCRPCMAAAVVPVH----KAF--FG

Query:  SSRVEEDSYYLLSWKCRCGNKIYQP
        SSR EEDSYYLLSWKC+CGNKIYQP
Subjt:  SSRVEEDSYYLLSWKCRCGNKIYQP

KAE8646441.1 hypothetical protein Csa_015844 [Cucumis sativus]4.0e-2557.6Show/hide
Query:  MAFSMSLPCSFKMALTVAFFFFFFFFTFLPSKS------------------------EKKMVIGSRPPGCENKCKSCRPCMAAAVVPVH----KAF--FG
        MA  +SL  S K+ALT+A      FF+FLP  S                        E+KMVIGSRPPGC+NKC +CRPCMAAAVVPVH    KAF  F 
Subjt:  MAFSMSLPCSFKMALTVAFFFFFFFFTFLPSKS------------------------EKKMVIGSRPPGCENKCKSCRPCMAAAVVPVH----KAF--FG

Query:  SSRVEEDSYYLLSWKCRCGNKIYQP
        SSR EEDSYYLLSWKCRCGNKIYQP
Subjt:  SSRVEEDSYYLLSWKCRCGNKIYQP

KAG6593393.1 Polygalacturonase, partial [Cucurbita argyrosperma subsp. sororia]1.6e-2961.6Show/hide
Query:  MSLPCSFKMALTVAFFFFFFFFTFLPSKS-----------------------------EKKMVIGSRPPGCENKCKSCRPCMAAAVVPVH-----KAFFG
        MSLP SFK+ L +  FFFFFF TFLPSKS                             +KKMVIGSRPPGCENKCKSCRPCMAAAVVP H     KAF  
Subjt:  MSLPCSFKMALTVAFFFFFFFFTFLPSKS-----------------------------EKKMVIGSRPPGCENKCKSCRPCMAAAVVPVH-----KAFFG

Query:  SSRVEEDSYYLLSWKCRCGNKIYQP
        SS VE+DSYYLLSWKCRCGNKIYQP
Subjt:  SSRVEEDSYYLLSWKCRCGNKIYQP

KAG7025740.1 Polygalacturonase, partial [Cucurbita argyrosperma subsp. argyrosperma]2.9e-3162.4Show/hide
Query:  MSLPCSFKMALTVAFFFFFFFFTFLPSKS-----------------------------EKKMVIGSRPPGCENKCKSCRPCMAAAVVPVH-----KAFFG
        MSLP SFK+ L + FFFFFFF TFLPSKS                             +KKMVIGSRPPGCENKCKSCRPCMAAAVVP H     KAF  
Subjt:  MSLPCSFKMALTVAFFFFFFFFTFLPSKS-----------------------------EKKMVIGSRPPGCENKCKSCRPCMAAAVVPVH-----KAFFG

Query:  SSRVEEDSYYLLSWKCRCGNKIYQP
        SS VE+DSYYLLSWKCRCGNKIYQP
Subjt:  SSRVEEDSYYLLSWKCRCGNKIYQP

XP_008461115.1 PREDICTED: EPIDERMAL PATTERNING FACTOR-like protein 4 [Cucumis melo]2.6e-2456Show/hide
Query:  MAFSMSLPCSFKMALTVAFFFFFFFFTFLPSKS------------------------EKKMVIGSRPPGCENKCKSCRPCMAAAVVPVH----KAF--FG
        MA  +SL  S K+ALT+A      FF+FLP  S                        ++KMVIGSRPPGC+NKC +CRPCMAAAVVPVH    KAF  F 
Subjt:  MAFSMSLPCSFKMALTVAFFFFFFFFTFLPSKS------------------------EKKMVIGSRPPGCENKCKSCRPCMAAAVVPVH----KAF--FG

Query:  SSRVEEDSYYLLSWKCRCGNKIYQP
        SSR EEDSYYLLSWKC+CGNKIYQP
Subjt:  SSRVEEDSYYLLSWKCRCGNKIYQP

TrEMBL top hitse value%identityAlignment
A0A0A0K6C2 Epidermal patterning factor-like protein1.9e-2557.6Show/hide
Query:  MAFSMSLPCSFKMALTVAFFFFFFFFTFLPSKS------------------------EKKMVIGSRPPGCENKCKSCRPCMAAAVVPVH----KAF--FG
        MA  +SL  S K+ALT+A      FF+FLP  S                        E+KMVIGSRPPGC+NKC +CRPCMAAAVVPVH    KAF  F 
Subjt:  MAFSMSLPCSFKMALTVAFFFFFFFFTFLPSKS------------------------EKKMVIGSRPPGCENKCKSCRPCMAAAVVPVH----KAF--FG

Query:  SSRVEEDSYYLLSWKCRCGNKIYQP
        SSR EEDSYYLLSWKCRCGNKIYQP
Subjt:  SSRVEEDSYYLLSWKCRCGNKIYQP

A0A1S3CDZ4 Epidermal patterning factor-like protein1.3e-2456Show/hide
Query:  MAFSMSLPCSFKMALTVAFFFFFFFFTFLPSKS------------------------EKKMVIGSRPPGCENKCKSCRPCMAAAVVPVH----KAF--FG
        MA  +SL  S K+ALT+A      FF+FLP  S                        ++KMVIGSRPPGC+NKC +CRPCMAAAVVPVH    KAF  F 
Subjt:  MAFSMSLPCSFKMALTVAFFFFFFFFTFLPSKS------------------------EKKMVIGSRPPGCENKCKSCRPCMAAAVVPVH----KAF--FG

Query:  SSRVEEDSYYLLSWKCRCGNKIYQP
        SSR EEDSYYLLSWKC+CGNKIYQP
Subjt:  SSRVEEDSYYLLSWKCRCGNKIYQP

A0A5D3CGR2 Epidermal patterning factor-like protein3.7e-2456Show/hide
Query:  MAFSMSLPCSFKMALTVAFFFFFFFFTFLPSKS------------------------EKKMVIGSRPPGCENKCKSCRPCMAAAVVPVH----KAF--FG
        MA  +SL  S K+ALT+A      FF+FLP  S                         +KMVIGSRPPGC NKC +CRPCMAAAVVPVH    KAF  F 
Subjt:  MAFSMSLPCSFKMALTVAFFFFFFFFTFLPSKS------------------------EKKMVIGSRPPGCENKCKSCRPCMAAAVVPVH----KAF--FG

Query:  SSRVEEDSYYLLSWKCRCGNKIYQP
        SSR EEDSYYLLSWKC+CGNKIYQP
Subjt:  SSRVEEDSYYLLSWKCRCGNKIYQP

A0A6J1GR07 Epidermal patterning factor-like protein5.0e-2164.21Show/hide
Query:  MALTVAFFFFFFFFTFLPSKS-----EKKMVIGSRPPGCENKCKSCRPCM-AAAVVPVH----KAF--FGSSRVEEDSYYLLSWKCRCGNKIYQP
        + L +    FFFFF+ +P KS     E  M IGSRPPGC NKC SCRPCM AAAVVPVH    KAF    SSR EE SYYLLSWKC+CGNKIYQP
Subjt:  MALTVAFFFFFFFFTFLPSKS-----EKKMVIGSRPPGCENKCKSCRPCM-AAAVVPVH----KAF--FGSSRVEEDSYYLLSWKCRCGNKIYQP

A0A6J1JXA0 Epidermal patterning factor-like protein2.2e-2164.21Show/hide
Query:  MALTVAFFFFFFFFTFLPSKS-----EKKMVIGSRPPGCENKCKSCRPCM-AAAVVPVH----KAF--FGSSRVEEDSYYLLSWKCRCGNKIYQP
        + L +    FFFFF+ +P KS     E  M IGSRPPGC +KC SCRPCM AAAVVPVH    KAF    SSR EEDSYYLLSWKC+CGNKIYQP
Subjt:  MALTVAFFFFFFFFTFLPSKS-----EKKMVIGSRPPGCENKCKSCRPCM-AAAVVPVH----KAF--FGSSRVEEDSYYLLSWKCRCGNKIYQP

SwissProt top hitse value%identityAlignment
P43212 Polygalacturonase1.1e-0641.67Show/hide
Query:  KMVIGSRPPGCENKCKSCRPCMAAAVVPVHKAFFGSSRVEEDSYYLLSWKCRCGNKIYQP
        ++++GSRPP C NKC  C PC A  V+ VH       R+    YY   W C    KIY P
Subjt:  KMVIGSRPPGCENKCKSCRPCMAAAVVPVHKAFFGSSRVEEDSYYLLSWKCRCGNKIYQP

Q1G3V9 EPIDERMAL PATTERNING FACTOR-like protein 81.9e-0633.68Show/hide
Query:  CSFKMALTVAFFFFFFFFTFLPSKSE------KKMVIGSRPPGCENKCKSCRPCMAAAVVPVHKAFFGSSRVEEDS--YYLLSWKCRCGNKIYQP
        C F  AL VA  FF        S +       K+ V+GS PP C  KC++C+PC+     P      G+   ++DS  YY + W CRC +++++P
Subjt:  CSFKMALTVAFFFFFFFFTFLPSKSE------KKMVIGSRPPGCENKCKSCRPCMAAAVVPVHKAFFGSSRVEEDS--YYLLSWKCRCGNKIYQP

Q1PEY6 EPIDERMAL PATTERNING FACTOR-like protein 68.7e-0742.11Show/hide
Query:  IGSRPPGCENKCKSCRPCMAAAVVPVHKAFFGSSRVEEDSYYLLSWKCRCGNKIYQP
        +GS PP C +KC  C PC      PVH      + V  + YY  +W+C+CGNK+Y P
Subjt:  IGSRPPGCENKCKSCRPCMAAAVVPVHKAFFGSSRVEEDSYYLLSWKCRCGNKIYQP

Q2V3I3 EPIDERMAL PATTERNING FACTOR-like protein 49.7e-0639.29Show/hide
Query:  GSRPPGCENKCKSCRPCMAAAVVPVHKAFFGSSRVEEDSYYLLSWKCRCGNKIYQP
        GS PP C +KC  C+PC      PVH        +  + YY  +W+C+CGNK++ P
Subjt:  GSRPPGCENKCKSCRPCMAAAVVPVHKAFFGSSRVEEDSYYLLSWKCRCGNKIYQP

Q9T068 EPIDERMAL PATTERNING FACTOR-like protein 29.7e-0636.36Show/hide
Query:  VIGSRPPGCEN-KCKSCRPCMAAAV-----VPVHKAFFGSSRVEEDSYYL-------------LSWKCRCGNKIYQP
        +IGSRPP CE  +C+SC  C A  V       +H     SS    ++ +L             +SWKC+CGN IY P
Subjt:  VIGSRPPGCEN-KCKSCRPCMAAAV-----VPVHKAFFGSSRVEEDSYYL-------------LSWKCRCGNKIYQP

Arabidopsis top hitse value%identityAlignment
AT1G80133.1 unknown protein1.4e-0733.68Show/hide
Query:  CSFKMALTVAFFFFFFFFTFLPSKSE------KKMVIGSRPPGCENKCKSCRPCMAAAVVPVHKAFFGSSRVEEDS--YYLLSWKCRCGNKIYQP
        C F  AL VA  FF        S +       K+ V+GS PP C  KC++C+PC+     P      G+   ++DS  YY + W CRC +++++P
Subjt:  CSFKMALTVAFFFFFFFFTFLPSKSE------KKMVIGSRPPGCENKCKSCRPCMAAAVVPVHKAFFGSSRVEEDS--YYLLSWKCRCGNKIYQP

AT2G30370.1 allergen-related6.2e-0842.11Show/hide
Query:  IGSRPPGCENKCKSCRPCMAAAVVPVHKAFFGSSRVEEDSYYLLSWKCRCGNKIYQP
        +GS PP C +KC  C PC      PVH      + V  + YY  +W+C+CGNK+Y P
Subjt:  IGSRPPGCENKCKSCRPCMAAAVVPVHKAFFGSSRVEEDSYYLLSWKCRCGNKIYQP

AT2G30370.2 allergen-related6.2e-0842.11Show/hide
Query:  IGSRPPGCENKCKSCRPCMAAAVVPVHKAFFGSSRVEEDSYYLLSWKCRCGNKIYQP
        +GS PP C +KC  C PC      PVH      + V  + YY  +W+C+CGNK+Y P
Subjt:  IGSRPPGCENKCKSCRPCMAAAVVPVHKAFFGSSRVEEDSYYLLSWKCRCGNKIYQP

AT4G14723.1 BEST Arabidopsis thaliana protein match is: allergen-related (TAIR:AT3G22820.1)6.9e-0739.29Show/hide
Query:  GSRPPGCENKCKSCRPCMAAAVVPVHKAFFGSSRVEEDSYYLLSWKCRCGNKIYQP
        GS PP C +KC  C+PC      PVH        +  + YY  +W+C+CGNK++ P
Subjt:  GSRPPGCENKCKSCRPCMAAAVVPVHKAFFGSSRVEEDSYYLLSWKCRCGNKIYQP

AT4G37810.1 unknown protein6.9e-0736.36Show/hide
Query:  VIGSRPPGCEN-KCKSCRPCMAAAV-----VPVHKAFFGSSRVEEDSYYL-------------LSWKCRCGNKIYQP
        +IGSRPP CE  +C+SC  C A  V       +H     SS    ++ +L             +SWKC+CGN IY P
Subjt:  VIGSRPPGCEN-KCKSCRPCMAAAV-----VPVHKAFFGSSRVEEDSYYL-------------LSWKCRCGNKIYQP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTTCTCAATGTCTCTTCCTTGTTCCTTCAAAATGGCTCTCACTGTTGCTTTCTTCTTCTTCTTCTTCTTCTTCACATTTCTTCCTTCTAAATCAGAGAAAAAAAT
GGTGATTGGTTCAAGGCCGCCGGGGTGTGAGAACAAGTGCAAGAGTTGCAGGCCGTGCATGGCGGCGGCGGTGGTGCCGGTGCACAAAGCCTTTTTTGGTTCCTCTCGAG
TGGAAGAAGATAGCTATTATCTTCTCTCTTGGAAATGCCGATGTGGGAATAAGATCTATCAACCTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCTTTCTCAATGTCTCTTCCTTGTTCCTTCAAAATGGCTCTCACTGTTGCTTTCTTCTTCTTCTTCTTCTTCTTCACATTTCTTCCTTCTAAATCAGAGAAAAAAAT
GGTGATTGGTTCAAGGCCGCCGGGGTGTGAGAACAAGTGCAAGAGTTGCAGGCCGTGCATGGCGGCGGCGGTGGTGCCGGTGCACAAAGCCTTTTTTGGTTCCTCTCGAG
TGGAAGAAGATAGCTATTATCTTCTCTCTTGGAAATGCCGATGTGGGAATAAGATCTATCAACCTTAG
Protein sequenceShow/hide protein sequence
MAFSMSLPCSFKMALTVAFFFFFFFFTFLPSKSEKKMVIGSRPPGCENKCKSCRPCMAAAVVPVHKAFFGSSRVEEDSYYLLSWKCRCGNKIYQP