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Tan0016594 (gene) of Snake gourd v1 genome

Gene IDTan0016594
OrganismTrichosanthes anguina (Snake gourd v1)
Descriptiontranscription factor bHLH149-like
Genome locationLG01:17066534..17067184
RNA-Seq ExpressionTan0016594
SyntenyTan0016594
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
InterPro domainsIPR044660 - Transcription factor IBH1-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6588599.1 Transcription factor basic helix-loop-helix 149, partial [Cucurbita argyrosperma subsp. sororia]1.0e-2544.44Show/hide
Query:  MGAIVSNLEESRNFNLMEQRP----------------------------------------IEALHRVSQKSRSPPVKSSINDH----------------
        M  I+S LEE RN + ME+RP                                        ++ALHR+SQKS SP  +SSI+                  
Subjt:  MGAIVSNLEESRNFNLMEQRP----------------------------------------IEALHRVSQKSRSPPVKSSINDH----------------

Query:  KTRWSRAILANQLDLKPKKNKKEVKPTGNCNRPTKLKISKTRKLLAVQ------------WNKVSFSNLLEEATDYIATLYMQVCTMIAVMELLVGAPTN
        KTRWSRAIL+N+LDLK KK KK VKP GNC    KL++SKTRKL AVQ              K+SF NLLEEATDYIA L MQV  M AV E+L GAP +
Subjt:  KTRWSRAILANQLDLKPKKNKKEVKPTGNCNRPTKLKISKTRKLLAVQ------------WNKVSFSNLLEEATDYIATLYMQVCTMIAVMELLVGAPTN

Query:  RQSFITN
        RQSF TN
Subjt:  RQSFITN

XP_022931562.1 transcription factor bHLH149-like [Cucurbita moschata]1.3e-2544.44Show/hide
Query:  MGAIVSNLEESRNFNLMEQRP----------------------------------------IEALHRVSQKSRSPPVKSSINDH----------------
        M  I+S LEE RN + ME+RP                                        ++ALHR+SQKS SP  +SSI+                  
Subjt:  MGAIVSNLEESRNFNLMEQRP----------------------------------------IEALHRVSQKSRSPPVKSSINDH----------------

Query:  KTRWSRAILANQLDLKPKKNKKEVKPTGNCNRPTKLKISKTRKLLAVQ------------WNKVSFSNLLEEATDYIATLYMQVCTMIAVMELLVGAPTN
        KTRWSRAIL+N+LDLK KK KK VKP GNC    KL++SKTRKL AVQ              K+SF NLLEEATDYIA L MQV  M AV E+L GAP +
Subjt:  KTRWSRAILANQLDLKPKKNKKEVKPTGNCNRPTKLKISKTRKLLAVQ------------WNKVSFSNLLEEATDYIATLYMQVCTMIAVMELLVGAPTN

Query:  RQSFITN
        RQSF TN
Subjt:  RQSFITN

XP_022968790.1 transcription factor bHLH149-like [Cucurbita maxima]1.9e-2444.02Show/hide
Query:  MGAIVSNLEESRNFNLMEQRP----------------------------------------IEALHRVSQKSRSPPVKSSIN----------------DH
        M AI SNLEESR+F+  EQRP                                        +EALHRV++++ SPP KSSIN                + 
Subjt:  MGAIVSNLEESRNFNLMEQRP----------------------------------------IEALHRVSQKSRSPPVKSSIN----------------DH

Query:  KTRWSRAILANQLDLKPKKNKKEVKPTGNCNRPTKLKIS-KTRKLLAVQ------------WNKVSFSNLLEEATDYIATLYMQVCTMIAVMELLVGAPT
        KTRWSRAIL N+L+LK  KN K+ KP GNC RP KLKI  +TRKL  VQ              K+SF NLL+EATDYIA L MQV  M AV ELL G P 
Subjt:  KTRWSRAILANQLDLKPKKNKKEVKPTGNCNRPTKLKIS-KTRKLLAVQ------------WNKVSFSNLLEEATDYIATLYMQVCTMIAVMELLVGAPT

Query:  N-RQSFITN
        + +QSF TN
Subjt:  N-RQSFITN

XP_022989472.1 transcription factor bHLH149-like [Cucurbita maxima]1.1e-2443.48Show/hide
Query:  MGAIVSNLEESRNFNLMEQRP----------------------------------------IEALHRVSQKSRSPPVKSSINDH----------------
        M AIVS + E RN + ME+RP                                        ++ALHR+SQKS  P  +SSIN                  
Subjt:  MGAIVSNLEESRNFNLMEQRP----------------------------------------IEALHRVSQKSRSPPVKSSINDH----------------

Query:  KTRWSRAILANQLDLKPKKNKKEVKPTGNCNRPTKLKISKTRKLLAVQ------------WNKVSFSNLLEEATDYIATLYMQVCTMIAVMELLVGAPTN
        KTRWSRAIL+N+LDLK KK KK VKP GNC    KL++ KTRKL AVQ              K+SF NLLEEATDYIA L MQV  M AV E+L GAP +
Subjt:  KTRWSRAILANQLDLKPKKNKKEVKPTGNCNRPTKLKISKTRKLLAVQ------------WNKVSFSNLLEEATDYIATLYMQVCTMIAVMELLVGAPTN

Query:  RQSFITN
        RQ+F TN
Subjt:  RQSFITN

XP_023530134.1 transcription factor bHLH149-like [Cucurbita pepo subsp. pepo]2.9e-2544.93Show/hide
Query:  MGAIVSNLEESRNFNLMEQRP----------------------------------------IEALHRVSQKSRSPPVKSSINDH----------------
        M  IVS LEE RN + MEQRP                                        ++ALHR+SQKS SP  +SSIN                  
Subjt:  MGAIVSNLEESRNFNLMEQRP----------------------------------------IEALHRVSQKSRSPPVKSSINDH----------------

Query:  KTRWSRAILANQLDLKPKKNKKEVKPTGNCNRPTKLKISKTRKLLAVQ------------WNKVSFSNLLEEATDYIATLYMQVCTMIAVMELLVGAPTN
        KTRWSRAIL+N+LDLK KK KK VKP GN     KL++SKTRKL AVQ               +SF NLLEEATDYIA L MQV  M AV E+L GAP +
Subjt:  KTRWSRAILANQLDLKPKKNKKEVKPTGNCNRPTKLKISKTRKLLAVQ------------WNKVSFSNLLEEATDYIATLYMQVCTMIAVMELLVGAPTN

Query:  RQSFITN
        RQSF TN
Subjt:  RQSFITN

TrEMBL top hitse value%identityAlignment
A0A0A0LVP8 BHLH domain-containing protein5.9e-1649.66Show/hide
Query:  IEALHRV-SQKSRSPPVKSSINDH----------------KTRWSRAILAN-QLDLKPKKNKKEVKPTGNCNRPTKLKIS-KTRKLLAVQ----------
        ++ALHRV +QKS S P  SSI+                  KTRWSRAIL N +L  K KK KK VK  GNC+R  KLKI  + RKL  VQ          
Subjt:  IEALHRV-SQKSRSPPVKSSINDH----------------KTRWSRAILAN-QLDLKPKKNKKEVKPTGNCNRPTKLKIS-KTRKLLAVQ----------

Query:  --WNKVSFSNLLEEATDYIATLYMQVCTMIAVMELLVGAPTNRQSFITN
            K+SF NLLEEA+DYI+ L MQV  M AV ELL GAP +RQS  TN
Subjt:  --WNKVSFSNLLEEATDYIATLYMQVCTMIAVMELLVGAPTNRQSFITN

A0A6J1EU06 transcription factor bHLH149-like6.3e-2644.44Show/hide
Query:  MGAIVSNLEESRNFNLMEQRP----------------------------------------IEALHRVSQKSRSPPVKSSINDH----------------
        M  I+S LEE RN + ME+RP                                        ++ALHR+SQKS SP  +SSI+                  
Subjt:  MGAIVSNLEESRNFNLMEQRP----------------------------------------IEALHRVSQKSRSPPVKSSINDH----------------

Query:  KTRWSRAILANQLDLKPKKNKKEVKPTGNCNRPTKLKISKTRKLLAVQ------------WNKVSFSNLLEEATDYIATLYMQVCTMIAVMELLVGAPTN
        KTRWSRAIL+N+LDLK KK KK VKP GNC    KL++SKTRKL AVQ              K+SF NLLEEATDYIA L MQV  M AV E+L GAP +
Subjt:  KTRWSRAILANQLDLKPKKNKKEVKPTGNCNRPTKLKISKTRKLLAVQ------------WNKVSFSNLLEEATDYIATLYMQVCTMIAVMELLVGAPTN

Query:  RQSFITN
        RQSF TN
Subjt:  RQSFITN

A0A6J1HC54 transcription factor bHLH149-like7.7e-2443.54Show/hide
Query:  MGAIVSNLEESRNFNLMEQRP----------------------------------------IEALHRVSQKSRSPPVKSSINDH----------------
        M AI SNLEESR+ +  EQRP                                        +EALHRV++++ SPP KSSIN                  
Subjt:  MGAIVSNLEESRNFNLMEQRP----------------------------------------IEALHRVSQKSRSPPVKSSINDH----------------

Query:  KTRWSRAILANQLDLKPKKNKKEVKPTGNCNRPTKLKIS-KTRKLLAVQ------------WNKVSFSNLLEEATDYIATLYMQVCTMIAVMELLVGAPT
        KTRWSRAIL N+L+LK KK+KK  KP GNC RP K+KI  +TRKL  VQ              K+SF NLL+EATDYIA L MQV  M AV ELL G P 
Subjt:  KTRWSRAILANQLDLKPKKNKKEVKPTGNCNRPTKLKIS-KTRKLLAVQ------------WNKVSFSNLLEEATDYIATLYMQVCTMIAVMELLVGAPT

Query:  N-RQSFITN
        + +QSF TN
Subjt:  N-RQSFITN

A0A6J1HY72 transcription factor bHLH149-like9.1e-2544.02Show/hide
Query:  MGAIVSNLEESRNFNLMEQRP----------------------------------------IEALHRVSQKSRSPPVKSSIN----------------DH
        M AI SNLEESR+F+  EQRP                                        +EALHRV++++ SPP KSSIN                + 
Subjt:  MGAIVSNLEESRNFNLMEQRP----------------------------------------IEALHRVSQKSRSPPVKSSIN----------------DH

Query:  KTRWSRAILANQLDLKPKKNKKEVKPTGNCNRPTKLKIS-KTRKLLAVQ------------WNKVSFSNLLEEATDYIATLYMQVCTMIAVMELLVGAPT
        KTRWSRAIL N+L+LK  KN K+ KP GNC RP KLKI  +TRKL  VQ              K+SF NLL+EATDYIA L MQV  M AV ELL G P 
Subjt:  KTRWSRAILANQLDLKPKKNKKEVKPTGNCNRPTKLKIS-KTRKLLAVQ------------WNKVSFSNLLEEATDYIATLYMQVCTMIAVMELLVGAPT

Query:  N-RQSFITN
        + +QSF TN
Subjt:  N-RQSFITN

A0A6J1JFX6 transcription factor bHLH149-like5.3e-2543.48Show/hide
Query:  MGAIVSNLEESRNFNLMEQRP----------------------------------------IEALHRVSQKSRSPPVKSSINDH----------------
        M AIVS + E RN + ME+RP                                        ++ALHR+SQKS  P  +SSIN                  
Subjt:  MGAIVSNLEESRNFNLMEQRP----------------------------------------IEALHRVSQKSRSPPVKSSINDH----------------

Query:  KTRWSRAILANQLDLKPKKNKKEVKPTGNCNRPTKLKISKTRKLLAVQ------------WNKVSFSNLLEEATDYIATLYMQVCTMIAVMELLVGAPTN
        KTRWSRAIL+N+LDLK KK KK VKP GNC    KL++ KTRKL AVQ              K+SF NLLEEATDYIA L MQV  M AV E+L GAP +
Subjt:  KTRWSRAILANQLDLKPKKNKKEVKPTGNCNRPTKLKISKTRKLLAVQ------------WNKVSFSNLLEEATDYIATLYMQVCTMIAVMELLVGAPTN

Query:  RQSFITN
        RQ+F TN
Subjt:  RQSFITN

SwissProt top hitse value%identityAlignment
O80482 Transcription factor bHLH1493.6e-1047.92Show/hide
Query:  TRWSRAILANQLDLKPKKNKKEVKPTGNCNRPTKLKISKTRKLLAVQ------------WNKVSFSNLLEEATDYIATLYMQVCTMIAVMELLVGA
        TRWSRAILA+++  K KK++K  K TGNC     L  +   KL AV+              KVS  NLL+EATDYIA L MQV  M A+ ELL  A
Subjt:  TRWSRAILANQLDLKPKKNKKEVKPTGNCNRPTKLKISKTRKLLAVQ------------WNKVSFSNLLEEATDYIATLYMQVCTMIAVMELLVGA

Arabidopsis top hitse value%identityAlignment
AT1G09250.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein2.5e-1147.92Show/hide
Query:  TRWSRAILANQLDLKPKKNKKEVKPTGNCNRPTKLKISKTRKLLAVQ------------WNKVSFSNLLEEATDYIATLYMQVCTMIAVMELLVGA
        TRWSRAILA+++  K KK++K  K TGNC     L  +   KL AV+              KVS  NLL+EATDYIA L MQV  M A+ ELL  A
Subjt:  TRWSRAILANQLDLKPKKNKKEVKPTGNCNRPTKLKISKTRKLLAVQ------------WNKVSFSNLLEEATDYIATLYMQVCTMIAVMELLVGA

AT3G17100.1 sequence-specific DNA binding transcription factors5.1e-0434.55Show/hide
Query:  KTRWSRAILANQLDLKPKKNKKE--------VKPTGNC----NRPTKLKISKTRKLLAVQ------------WNKVSFSNLLEEATDYIATLYMQVCTMI
        KT WSRAIL+  + LK +K+K++           TG+      R T L++ K + L AVQ              K S   +LEE TDYIA + MQ+ TM 
Subjt:  KTRWSRAILANQLDLKPKKNKKE--------VKPTGNC----NRPTKLKISKTRKLLAVQ------------WNKVSFSNLLEEATDYIATLYMQVCTMI

Query:  AVMELLVGAP
        A++  +  +P
Subjt:  AVMELLVGAP

AT3G17100.2 sequence-specific DNA binding transcription factors5.1e-0434.55Show/hide
Query:  KTRWSRAILANQLDLKPKKNKKE--------VKPTGNC----NRPTKLKISKTRKLLAVQ------------WNKVSFSNLLEEATDYIATLYMQVCTMI
        KT WSRAIL+  + LK +K+K++           TG+      R T L++ K + L AVQ              K S   +LEE TDYIA + MQ+ TM 
Subjt:  KTRWSRAILANQLDLKPKKNKKE--------VKPTGNC----NRPTKLKISKTRKLLAVQ------------WNKVSFSNLLEEATDYIATLYMQVCTMI

Query:  AVMELLVGAP
        A++  +  +P
Subjt:  AVMELLVGAP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTGCGATTGTTTCTAACCTAGAAGAGTCGAGGAATTTCAATTTGATGGAGCAGCGACCAATTGAGGCTCTCCATCGAGTAAGTCAGAAATCTAGATCGCCGCCAGT
GAAATCTTCGATCAACGACCACAAAACGCGGTGGAGCAGAGCGATCTTAGCAAATCAACTCGATCTCAAACCCAAGAAGAACAAGAAAGAGGTGAAACCGACTGGGAACT
GTAATCGGCCGACAAAATTGAAAATATCTAAGACAAGGAAATTACTAGCGGTGCAGTGGAATAAAGTGTCATTCTCGAACCTCCTTGAAGAAGCTACAGACTACATCGCG
ACTCTGTATATGCAGGTTTGTACCATGATAGCCGTCATGGAGCTTCTCGTCGGTGCTCCGACCAATCGTCAAAGCTTCATAACGAATTTGAGAAGCCAATTCCAATCCAA
AGGCCTATTATTTTTTTTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGGTGCGATTGTTTCTAACCTAGAAGAGTCGAGGAATTTCAATTTGATGGAGCAGCGACCAATTGAGGCTCTCCATCGAGTAAGTCAGAAATCTAGATCGCCGCCAGT
GAAATCTTCGATCAACGACCACAAAACGCGGTGGAGCAGAGCGATCTTAGCAAATCAACTCGATCTCAAACCCAAGAAGAACAAGAAAGAGGTGAAACCGACTGGGAACT
GTAATCGGCCGACAAAATTGAAAATATCTAAGACAAGGAAATTACTAGCGGTGCAGTGGAATAAAGTGTCATTCTCGAACCTCCTTGAAGAAGCTACAGACTACATCGCG
ACTCTGTATATGCAGGTTTGTACCATGATAGCCGTCATGGAGCTTCTCGTCGGTGCTCCGACCAATCGTCAAAGCTTCATAACGAATTTGAGAAGCCAATTCCAATCCAA
AGGCCTATTATTTTTTTTTTAA
Protein sequenceShow/hide protein sequence
MGAIVSNLEESRNFNLMEQRPIEALHRVSQKSRSPPVKSSINDHKTRWSRAILANQLDLKPKKNKKEVKPTGNCNRPTKLKISKTRKLLAVQWNKVSFSNLLEEATDYIA
TLYMQVCTMIAVMELLVGAPTNRQSFITNLRSQFQSKGLLFFF