CuGenDBv2

Gene ID	Tan0016609
Organism	Trichosanthes anguina (Snake gourd v1)
Description	Protein FAR1-RELATED SEQUENCE 3-like
Genome location	LG03:32731393..32732313
RNA-Seq Expression	Tan0016609
Synteny	Tan0016609
Gene Ontology terms	GO:0008270 - zinc ion binding (molecular function)
InterPro domains	IPR006564 - Zinc finger, PMZ-type IPR007527 - Zinc finger, SWIM-type

Homology

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GenBank top hits

e value

%identity

Alignment

KAA0035755.1 uncharacterized protein E6C27_scaffold403G00270 [Cucumis melo var. makuwa]

2.0e-53

43.59

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Query:  HLLKNLKLVYKSKINDVIFYACAKAYNVIDFEHQMQQLELSARGIRNELLTIGLPKWSRAFAPRSRFTMMTTNISESLNVAIKKARDLPIASMLEVLRMT
        HLLKNLK  +KS   +  F  CA+AY  ++FE+ M+QLE  +  +R+EL  +G  KW+RAF  R R+ ++TTNISES+N  +K+ R+LPI  +LE +R  
Subjt:  HLLKNLKLVYKSKINDVIFYACAKAYNVIDFEHQMQQLELSARGIRNELLTIGLPKWSRAFAPRSRFTMMTTNISESLNVAIKKARDLPIASMLEVLRMT

Query:  MQRWFYERRNDCSFQVTMFTKVTEQQLRDSIQMGRSMQVNPVDNMEYQVIDGTRYYNVNLPRRSCSCRMWDTLQIPCSHACAVLTTKHISTKEYISAFYL
        +Q+WFYE R   SFQ T  +   E  +R+S+   RSM + PVD  E++V      + VN+  R+CSCR WD   IPCSHAC  L+T++++   Y   FY 
Subjt:  MQRWFYERRNDCSFQVTMFTKVTEQQLRDSIQMGRSMQVNPVDNMEYQVIDGTRYYNVNLPRRSCSCRMWDTLQIPCSHACAVLTTKHISTKEYISAFYL

Query:  NNTLASIYNSWVIP-EDVEQII---------VLPPNVKRSVGRPKKNRIPSQMEFKRRVKCGCCGKAGHNRKS
         + L ++Y     P   V QI          +LPP VKR  GRPKK R  S +E K  V+C  CGK GHN +S
Subjt:  NNTLASIYNSWVIP-EDVEQII---------VLPPNVKRSVGRPKKNRIPSQMEFKRRVKCGCCGKAGHNRKS

KAA0040870.1 uncharacterized protein E6C27_scaffold345G00200 [Cucumis melo var. makuwa]

1.3e-52

43.22

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Query:  HLLKNLKLVYKSKINDVIFYACAKAYNVIDFEHQMQQLELSARGIRNELLTIGLPKWSRAFAPRSRFTMMTTNISESLNVAIKKARDLPIASMLEVLRMT
        HLLKNLK  +KS   +  F  CA+AY  ++FE+ M+QLE  +  +R+EL  +G  KW+RAF  R R+ ++TTNISES+N  +KK R+LP+  +LE +R  
Subjt:  HLLKNLKLVYKSKINDVIFYACAKAYNVIDFEHQMQQLELSARGIRNELLTIGLPKWSRAFAPRSRFTMMTTNISESLNVAIKKARDLPIASMLEVLRMT

Query:  MQRWFYERRNDCSFQVTMFTKVTEQQLRDSIQMGRSMQVNPVDNMEYQVIDGTRYYNVNLPRRSCSCRMWDTLQIPCSHACAVLTTKHISTKEYISAFYL
        +Q+WFYERR    FQ T  +   E  +R+S+   RSM + PVD  E++V      + VN+  R+CSCR WD   IPCS+AC  L+T++++   Y   FY 
Subjt:  MQRWFYERRNDCSFQVTMFTKVTEQQLRDSIQMGRSMQVNPVDNMEYQVIDGTRYYNVNLPRRSCSCRMWDTLQIPCSHACAVLTTKHISTKEYISAFYL

Query:  NNTLASIYNSWVIP-EDVEQII---------VLPPNVKRSVGRPKKNRIPSQMEFKRRVKCGCCGKAGHNRKS
         + L ++Y     P   V QI          +LPP+VKR  GRPKK R  S +E K  V+C  CGK GHN +S
Subjt:  NNTLASIYNSWVIP-EDVEQII---------VLPPNVKRSVGRPKKNRIPSQMEFKRRVKCGCCGKAGHNRKS

TYK09853.1 uncharacterized protein E5676_scaffold39G00210 [Cucumis melo var. makuwa]

6.9e-54

43.22

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Query:  HLLKNLKLVYKSKINDVIFYACAKAYNVIDFEHQMQQLELSARGIRNELLTIGLPKWSRAFAPRSRFTMMTTNISESLNVAIKKARDLPIASMLEVLRMT
        HLLKNLK  +KS   +  F  CA+AY  ++FE+ M+QLE  +  +R+EL  +G  KW+RAF  R R+ ++TTNISES+   +K+ R+LP+  +LE +R  
Subjt:  HLLKNLKLVYKSKINDVIFYACAKAYNVIDFEHQMQQLELSARGIRNELLTIGLPKWSRAFAPRSRFTMMTTNISESLNVAIKKARDLPIASMLEVLRMT

Query:  MQRWFYERRNDCSFQVTMFTKVTEQQLRDSIQMGRSMQVNPVDNMEYQVIDGTRYYNVNLPRRSCSCRMWDTLQIPCSHACAVLTTKHISTKEYISAFYL
        +Q+WFYERR   SFQ T  +   E  +R+S+   RSM + PVD  E++V      + VN+  R+CSCR WD   IPCSHAC  L+T++++   Y   FY 
Subjt:  MQRWFYERRNDCSFQVTMFTKVTEQQLRDSIQMGRSMQVNPVDNMEYQVIDGTRYYNVNLPRRSCSCRMWDTLQIPCSHACAVLTTKHISTKEYISAFYL

Query:  NNTLASIYNSWVIP-EDVEQII---------VLPPNVKRSVGRPKKNRIPSQMEFKRRVKCGCCGKAGHNRKS
         + L ++Y     P   V QI          +LPP VKR  GRPKK R  S +E K  V+C  CGK GHN +S
Subjt:  NNTLASIYNSWVIP-EDVEQII---------VLPPNVKRSVGRPKKNRIPSQMEFKRRVKCGCCGKAGHNRKS

XP_008442298.1 PREDICTED: uncharacterized protein LOC103486212 [Cucumis melo]

2.0e-53

43.59

Show/hide

Query:  HLLKNLKLVYKSKINDVIFYACAKAYNVIDFEHQMQQLELSARGIRNELLTIGLPKWSRAFAPRSRFTMMTTNISESLNVAIKKARDLPIASMLEVLRMT
        HLLKNLK  +KS   +  F  CA+AY  ++FE+ M+QLE  +  +R+EL  +G  KW+RAF  R R+ ++TTNISES+N  +K+ R+LPI  +LE +R  
Subjt:  HLLKNLKLVYKSKINDVIFYACAKAYNVIDFEHQMQQLELSARGIRNELLTIGLPKWSRAFAPRSRFTMMTTNISESLNVAIKKARDLPIASMLEVLRMT

Query:  MQRWFYERRNDCSFQVTMFTKVTEQQLRDSIQMGRSMQVNPVDNMEYQVIDGTRYYNVNLPRRSCSCRMWDTLQIPCSHACAVLTTKHISTKEYISAFYL
        +Q+WFYE R   SFQ T  +   E  +R+S+   RSM + PVD  E++V      + VN+  R+CSCR WD   IPCSHAC  L+T++++   Y   FY 
Subjt:  MQRWFYERRNDCSFQVTMFTKVTEQQLRDSIQMGRSMQVNPVDNMEYQVIDGTRYYNVNLPRRSCSCRMWDTLQIPCSHACAVLTTKHISTKEYISAFYL

Query:  NNTLASIYNSWVIP-EDVEQII---------VLPPNVKRSVGRPKKNRIPSQMEFKRRVKCGCCGKAGHNRKS
         + L ++Y     P   V QI          +LPP VKR  GRPKK R  S +E K  V+C  CGK GHN +S
Subjt:  NNTLASIYNSWVIP-EDVEQII---------VLPPNVKRSVGRPKKNRIPSQMEFKRRVKCGCCGKAGHNRKS

XP_022134813.1 uncharacterized protein LOC111006994 [Momordica charantia]

4.8e-55

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Query:  HLLKNLKLVYKSKINDVIFYACAKAYNVIDFEHQMQQLELSARGIRNELLTIGLPKWSRAFAPRSRFTMMTTNISESLNVAIKKARDLPIASMLEVLRMT
        HL KNLKL YK K++D +F+ CAKAYNV DFE  M+ L+ + RGIR EL  IG  KWS AF+  SR+  MTTNISESLN A+K AR+LPI SMLEV+RM 
Subjt:  HLLKNLKLVYKSKINDVIFYACAKAYNVIDFEHQMQQLELSARGIRNELLTIGLPKWSRAFAPRSRFTMMTTNISESLNVAIKKARDLPIASMLEVLRMT

Query:  MQRWFYERRNDCSFQVTMFTKVTEQQLRDSIQMGRSMQVNPVDNMEYQVIDGTRYYNVNLPRRSCSCRMWDTLQIPCSHACAVLTTKHISTKEYISAFYL
        +QRWFYER+N   FQ+T FTK  E++LR+ I  GR+M V  V+N  YQVID  R                                KH+ TK Y+S +Y 
Subjt:  MQRWFYERRNDCSFQVTMFTKVTEQQLRDSIQMGRSMQVNPVDNMEYQVIDGTRYYNVNLPRRSCSCRMWDTLQIPCSHACAVLTTKHISTKEYISAFYL

Query:  NNTLASIY----------NSWVIPEDVEQIIVLPPNVKRSVGRPKKNRI
        NN L S Y          +SW IPEDV+ I +LPPNVKR  GRPKK RI
Subjt:  NNTLASIY----------NSWVIPEDVEQIIVLPPNVKRSVGRPKKNRI

TrEMBL top hits

e value

%identity

Alignment

A0A1S3B5C9 uncharacterized protein LOC103486212

9.7e-54

43.59

Show/hide

Query:  HLLKNLKLVYKSKINDVIFYACAKAYNVIDFEHQMQQLELSARGIRNELLTIGLPKWSRAFAPRSRFTMMTTNISESLNVAIKKARDLPIASMLEVLRMT
        HLLKNLK  +KS   +  F  CA+AY  ++FE+ M+QLE  +  +R+EL  +G  KW+RAF  R R+ ++TTNISES+N  +K+ R+LPI  +LE +R  
Subjt:  HLLKNLKLVYKSKINDVIFYACAKAYNVIDFEHQMQQLELSARGIRNELLTIGLPKWSRAFAPRSRFTMMTTNISESLNVAIKKARDLPIASMLEVLRMT

Query:  MQRWFYERRNDCSFQVTMFTKVTEQQLRDSIQMGRSMQVNPVDNMEYQVIDGTRYYNVNLPRRSCSCRMWDTLQIPCSHACAVLTTKHISTKEYISAFYL
        +Q+WFYE R   SFQ T  +   E  +R+S+   RSM + PVD  E++V      + VN+  R+CSCR WD   IPCSHAC  L+T++++   Y   FY 
Subjt:  MQRWFYERRNDCSFQVTMFTKVTEQQLRDSIQMGRSMQVNPVDNMEYQVIDGTRYYNVNLPRRSCSCRMWDTLQIPCSHACAVLTTKHISTKEYISAFYL

Query:  NNTLASIYNSWVIP-EDVEQII---------VLPPNVKRSVGRPKKNRIPSQMEFKRRVKCGCCGKAGHNRKS
         + L ++Y     P   V QI          +LPP VKR  GRPKK R  S +E K  V+C  CGK GHN +S
Subjt:  NNTLASIYNSWVIP-EDVEQII---------VLPPNVKRSVGRPKKNRIPSQMEFKRRVKCGCCGKAGHNRKS

A0A5A7SJA0 Uncharacterized protein

6.3e-53

42.86

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Query:  HLLKNLKLVYKSKINDVIFYACAKAYNVIDFEHQMQQLELSARGIRNELLTIGLPKWSRAFAPRSRFTMMTTNISESLNVAIKKARDLPIASMLEVLRMT
        HLLKNLK  +KS   +  F  CA+ Y +++FE+ M+QLE  +  +R+EL  +G  KW+RAF  R R+ ++TTNISES+N  +K+ R+LP+  +LE +R  
Subjt:  HLLKNLKLVYKSKINDVIFYACAKAYNVIDFEHQMQQLELSARGIRNELLTIGLPKWSRAFAPRSRFTMMTTNISESLNVAIKKARDLPIASMLEVLRMT

Query:  MQRWFYERRNDCSFQVTMFTKVTEQQLRDSIQMGRSMQVNPVDNMEYQVIDGTRYYNVNLPRRSCSCRMWDTLQIPCSHACAVLTTKHISTKEYISAFYL
        +Q+WFYERR   SFQ T  +   E  +R+S+    SM + PVD  E++V      + VN+  R+CSCR WD   IPCSHAC  L+T++++   Y   FY 
Subjt:  MQRWFYERRNDCSFQVTMFTKVTEQQLRDSIQMGRSMQVNPVDNMEYQVIDGTRYYNVNLPRRSCSCRMWDTLQIPCSHACAVLTTKHISTKEYISAFYL

Query:  NNTLASIYNSWVIP-EDVEQII---------VLPPNVKRSVGRPKKNRIPSQMEFKRRVKCGCCGKAGHNRKS
         + L ++Y         V QI          +LPP VKR  GRPKK R  S +E K  V+C  CGK GHN KS
Subjt:  NNTLASIYNSWVIP-EDVEQII---------VLPPNVKRSVGRPKKNRIPSQMEFKRRVKCGCCGKAGHNRKS

A0A5A7T2S1 Uncharacterized protein

9.7e-54

43.59

Show/hide

Query:  HLLKNLKLVYKSKINDVIFYACAKAYNVIDFEHQMQQLELSARGIRNELLTIGLPKWSRAFAPRSRFTMMTTNISESLNVAIKKARDLPIASMLEVLRMT
        HLLKNLK  +KS   +  F  CA+AY  ++FE+ M+QLE  +  +R+EL  +G  KW+RAF  R R+ ++TTNISES+N  +K+ R+LPI  +LE +R  
Subjt:  HLLKNLKLVYKSKINDVIFYACAKAYNVIDFEHQMQQLELSARGIRNELLTIGLPKWSRAFAPRSRFTMMTTNISESLNVAIKKARDLPIASMLEVLRMT

Query:  MQRWFYERRNDCSFQVTMFTKVTEQQLRDSIQMGRSMQVNPVDNMEYQVIDGTRYYNVNLPRRSCSCRMWDTLQIPCSHACAVLTTKHISTKEYISAFYL
        +Q+WFYE R   SFQ T  +   E  +R+S+   RSM + PVD  E++V      + VN+  R+CSCR WD   IPCSHAC  L+T++++   Y   FY 
Subjt:  MQRWFYERRNDCSFQVTMFTKVTEQQLRDSIQMGRSMQVNPVDNMEYQVIDGTRYYNVNLPRRSCSCRMWDTLQIPCSHACAVLTTKHISTKEYISAFYL

Query:  NNTLASIYNSWVIP-EDVEQII---------VLPPNVKRSVGRPKKNRIPSQMEFKRRVKCGCCGKAGHNRKS
         + L ++Y     P   V QI          +LPP VKR  GRPKK R  S +E K  V+C  CGK GHN +S
Subjt:  NNTLASIYNSWVIP-EDVEQII---------VLPPNVKRSVGRPKKNRIPSQMEFKRRVKCGCCGKAGHNRKS

A0A5D3CDB8 Uncharacterized protein

3.3e-54

43.22

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Query:  HLLKNLKLVYKSKINDVIFYACAKAYNVIDFEHQMQQLELSARGIRNELLTIGLPKWSRAFAPRSRFTMMTTNISESLNVAIKKARDLPIASMLEVLRMT
        HLLKNLK  +KS   +  F  CA+AY  ++FE+ M+QLE  +  +R+EL  +G  KW+RAF  R R+ ++TTNISES+   +K+ R+LP+  +LE +R  
Subjt:  HLLKNLKLVYKSKINDVIFYACAKAYNVIDFEHQMQQLELSARGIRNELLTIGLPKWSRAFAPRSRFTMMTTNISESLNVAIKKARDLPIASMLEVLRMT

Query:  MQRWFYERRNDCSFQVTMFTKVTEQQLRDSIQMGRSMQVNPVDNMEYQVIDGTRYYNVNLPRRSCSCRMWDTLQIPCSHACAVLTTKHISTKEYISAFYL
        +Q+WFYERR   SFQ T  +   E  +R+S+   RSM + PVD  E++V      + VN+  R+CSCR WD   IPCSHAC  L+T++++   Y   FY 
Subjt:  MQRWFYERRNDCSFQVTMFTKVTEQQLRDSIQMGRSMQVNPVDNMEYQVIDGTRYYNVNLPRRSCSCRMWDTLQIPCSHACAVLTTKHISTKEYISAFYL

Query:  NNTLASIYNSWVIP-EDVEQII---------VLPPNVKRSVGRPKKNRIPSQMEFKRRVKCGCCGKAGHNRKS
         + L ++Y     P   V QI          +LPP VKR  GRPKK R  S +E K  V+C  CGK GHN +S
Subjt:  NNTLASIYNSWVIP-EDVEQII---------VLPPNVKRSVGRPKKNRIPSQMEFKRRVKCGCCGKAGHNRKS

A0A6J1C328 uncharacterized protein LOC111006994

2.3e-55

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Query:  HLLKNLKLVYKSKINDVIFYACAKAYNVIDFEHQMQQLELSARGIRNELLTIGLPKWSRAFAPRSRFTMMTTNISESLNVAIKKARDLPIASMLEVLRMT
        HL KNLKL YK K++D +F+ CAKAYNV DFE  M+ L+ + RGIR EL  IG  KWS AF+  SR+  MTTNISESLN A+K AR+LPI SMLEV+RM 
Subjt:  HLLKNLKLVYKSKINDVIFYACAKAYNVIDFEHQMQQLELSARGIRNELLTIGLPKWSRAFAPRSRFTMMTTNISESLNVAIKKARDLPIASMLEVLRMT

Query:  MQRWFYERRNDCSFQVTMFTKVTEQQLRDSIQMGRSMQVNPVDNMEYQVIDGTRYYNVNLPRRSCSCRMWDTLQIPCSHACAVLTTKHISTKEYISAFYL
        +QRWFYER+N   FQ+T FTK  E++LR+ I  GR+M V  V+N  YQVID  R                                KH+ TK Y+S +Y 
Subjt:  MQRWFYERRNDCSFQVTMFTKVTEQQLRDSIQMGRSMQVNPVDNMEYQVIDGTRYYNVNLPRRSCSCRMWDTLQIPCSHACAVLTTKHISTKEYISAFYL

Query:  NNTLASIY----------NSWVIPEDVEQIIVLPPNVKRSVGRPKKNRI
        NN L S Y          +SW IPEDV+ I +LPPNVKR  GRPKK RI
Subjt:  NNTLASIY----------NSWVIPEDVEQIIVLPPNVKRSVGRPKKNRI

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits	e value	%identity	Alignment
No hits found

Sequences

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CDS sequence

Show/hide CDS sequence

ATGGTCCATCTATTGAAGAACCTTAAGCTTGTATACAAGTCGAAGATTAATGATGTCATTTTCTATGCATGTGCCAAAGCTTATAATGTTATTGATTTTGAACATCAGAT
GCAACAACTAGAGTTAAGTGCTCGAGGTATTCGTAATGAATTGCTAACCATAGGTTTACCAAAGTGGTCCCGTGCCTTTGCACCTCGTAGTCGTTTTACGATGATGACAA
CTAACATTTCTGAAAGTTTGAATGTTGCCATTAAGAAAGCACGAGATTTGCCTATTGCATCCATGTTGGAGGTGCTAAGAATGACCATGCAAAGATGGTTTTATGAAAGG
AGGAATGATTGTTCTTTCCAAGTTACTATGTTTACTAAGGTCACTGAACAACAATTGCGAGACTCAATACAGATGGGTCGTTCTATGCAGGTTAATCCTGTAGACAATAT
GGAATATCAAGTCATAGATGGAACAAGATACTACAATGTGAATTTACCCAGAAGGAGTTGCAGTTGTAGAATGTGGGACACATTGCAGATTCCTTGCTCTCATGCATGTG
CTGTTTTGACTACTAAACACATTTCAACCAAAGAATATATTTCAGCATTTTACTTGAACAACACTCTTGCATCAATATATAACAGTTGGGTTATTCCAGAAGATGTCGAA
CAGATAATTGTTCTTCCACCCAATGTGAAGCGATCGGTTGGCAGGCCGAAGAAGAATAGAATTCCTTCACAAATGGAGTTCAAGAGACGTGTTAAATGCGGTTGTTGTGG
CAAAGCTGGTCATAATCGAAAGTCTTACAGATTCGCTCTTACACAATAA

mRNA sequence

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Protein sequence

Show/hide protein sequence

MVHLLKNLKLVYKSKINDVIFYACAKAYNVIDFEHQMQQLELSARGIRNELLTIGLPKWSRAFAPRSRFTMMTTNISESLNVAIKKARDLPIASMLEVLRMTMQRWFYER
RNDCSFQVTMFTKVTEQQLRDSIQMGRSMQVNPVDNMEYQVIDGTRYYNVNLPRRSCSCRMWDTLQIPCSHACAVLTTKHISTKEYISAFYLNNTLASIYNSWVIPEDVE
QIIVLPPNVKRSVGRPKKNRIPSQMEFKRRVKCGCCGKAGHNRKSYRFALTQ

Tan0016609 (gene) of Snake gourd v1 genome