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Tan0016664 (gene) of Snake gourd v1 genome

Gene IDTan0016664
OrganismTrichosanthes anguina (Snake gourd v1)
Descriptiontranscription factor TCP10-like
Genome locationLG05:75983643..75984243
RNA-Seq ExpressionTan0016664
SyntenyTan0016664
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:2000032 - regulation of secondary shoot formation (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
GO:0043565 - sequence-specific DNA binding (molecular function)
InterPro domainsIPR005333 - Transcription factor, TCP
IPR017887 - Transcription factor TCP subgroup


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6583970.1 Transcription factor TCP10, partial [Cucurbita argyrosperma subsp. sororia]7.5e-2272.84Show/hide
Query:  RLRSTSAGGKVFTSKGVRARRLRLSAPTAIQFYDVQDRLGCERPTEAVDWLLRNAKSAIDALSEPLETEGDSSKQNFSFLS
        RLRS++  GKV+TSKG RAR+LRLSAPTAIQFYD+QDRLG  RPTEA+DWLL+NAKSAID LS PLETE D  +Q   F S
Subjt:  RLRSTSAGGKVFTSKGVRARRLRLSAPTAIQFYDVQDRLGCERPTEAVDWLLRNAKSAIDALSEPLETEGDSSKQNFSFLS

XP_008443015.1 PREDICTED: transcription factor TCP10-like [Cucumis melo]9.7e-4665.68Show/hide
Query:  SLNDADENTAELGRRDGRLRST--SAGGKVFTSKGVRARRLRLSAPTAIQFYDVQDRLGCERPTEAVDWLLRNAKSAIDALSEPLETE-GDSSKQNFSFL
        SL+D D+  A++GRR+ RL S+  +  GKV+TSKG+RARRLRLSAPTAI+FYD+QDRLGC RPTEA+DWLL+NAK AIDALS PL+TE  D  KQ FS  
Subjt:  SLNDADENTAELGRRDGRLRST--SAGGKVFTSKGVRARRLRLSAPTAIQFYDVQDRLGCERPTEAVDWLLRNAKSAIDALSEPLETE-GDSSKQNFSFL

Query:  SMATSVP-SSSSSQFQSYPLQNFSQQGYFSVLSPMIFNASPMEFSGQEPPSSVSQTNVGTGFPSFPIWE
             VP SSSSSQFQSYPLQNFSQ+G  SV SPMI N +   FSG +PP   SQ+NVG GFP FP+WE
Subjt:  SMATSVP-SSSSSQFQSYPLQNFSQQGYFSVLSPMIFNASPMEFSGQEPPSSVSQTNVGTGFPSFPIWE

XP_011653401.1 transcription factor PCF8 [Cucumis sativus]3.6e-4866.47Show/hide
Query:  SLNDADENTAELGRRDGRLRSTS---AG-GKVFTSKGVRARRLRLSAPTAIQFYDVQDRLGCERPTEAVDWLLRNAKSAIDALSEPLETE-GDSSKQNFS
        SL+D D+NT ++ RR+ RL ST+   AG GKV+TSKG+RARRLRLSAPTAI+FYD+QDRLGC RPTEA+DWLL NAKSAIDALS PL+TE  D  KQ+FS
Subjt:  SLNDADENTAELGRRDGRLRSTS---AG-GKVFTSKGVRARRLRLSAPTAIQFYDVQDRLGCERPTEAVDWLLRNAKSAIDALSEPLETE-GDSSKQNFS

Query:  F---LSMATSVPSSSSSQFQSYPLQNFSQQGYFSVLSPMIFNASPMEFSGQEPPSSVSQTNVGTGFPSFPIWE
             S ++S  SSSSSQFQSYPLQNFSQ+G  SV  PMI NA+  EFSG +PP   SQ+N+G GFP FP+WE
Subjt:  F---LSMATSVPSSSSSQFQSYPLQNFSQQGYFSVLSPMIFNASPMEFSGQEPPSSVSQTNVGTGFPSFPIWE

XP_023001760.1 transcription factor PCF8-like [Cucurbita maxima]8.2e-4569.8Show/hide
Query:  RLRSTSAGGKVFTSKGVRARRLRLSAPTAIQFYDVQDRLGCERPTEAVDWLLRNAKSAIDALSEPLETEGDSSKQNFSFLSMATSVP-SSSSSQFQSYPL
        RLRS++  GKV+TSKG+RARRLRLSAPTAIQFYD+QDRLG  RPTEA+DWLL+NAKSAIDALS PLETE D  +   SF SMA+SVP SSSSSQF +YPL
Subjt:  RLRSTSAGGKVFTSKGVRARRLRLSAPTAIQFYDVQDRLGCERPTEAVDWLLRNAKSAIDALSEPLETEGDSSKQNFSFLSMATSVP-SSSSSQFQSYPL

Query:  QNFSQQGYFSVLSPMIFNASPMEFSGQEPPSSVSQTNVGTGFPSFPIWE
        +NF + G  SVLSPMI N +P EFSG +PP  +SQ+N  +G PSFP+WE
Subjt:  QNFSQQGYFSVLSPMIFNASPMEFSGQEPPSSVSQTNVGTGFPSFPIWE

XP_038893685.1 transcription factor TCP10-like [Benincasa hispida]5.9e-5168.39Show/hide
Query:  MGSQKRSLNDADENTAELGRRDGRLRSTSAG--GKVFTSKGVRARRLRLSAPTAIQFYDVQDRLGCERPTEAVDWLLRNAKSAIDALSEPLET-EGDSSK
        MGSQ+ SLND DE TA+LGRRD RLRS++    GKV+TS+G+RARR RLSAPTAI+FYDVQDRLG +RPTE +DWLL NAKSAIDALS PLET + +  K
Subjt:  MGSQKRSLNDADENTAELGRRDGRLRSTSAG--GKVFTSKGVRARRLRLSAPTAIQFYDVQDRLGCERPTEAVDWLLRNAKSAIDALSEPLET-EGDSSK

Query:  QNFSFLSMATSVPSSSSSQFQSYPLQNFSQQGYFSVLSPMIFNASPMEFSGQEPPSSVSQTNVGTGFPSFPIWE
        Q F      + VPSSSSSQFQSYPL+NFSQ+G  +V SPMI NA+P EFSG +PP   SQ+NV TGF SFPIWE
Subjt:  QNFSFLSMATSVPSSSSSQFQSYPLQNFSQQGYFSVLSPMIFNASPMEFSGQEPPSSVSQTNVGTGFPSFPIWE

TrEMBL top hitse value%identityAlignment
A0A0A0LUP1 TCP domain-containing protein1.7e-4866.47Show/hide
Query:  SLNDADENTAELGRRDGRLRSTS---AG-GKVFTSKGVRARRLRLSAPTAIQFYDVQDRLGCERPTEAVDWLLRNAKSAIDALSEPLETE-GDSSKQNFS
        SL+D D+NT ++ RR+ RL ST+   AG GKV+TSKG+RARRLRLSAPTAI+FYD+QDRLGC RPTEA+DWLL NAKSAIDALS PL+TE  D  KQ+FS
Subjt:  SLNDADENTAELGRRDGRLRSTS---AG-GKVFTSKGVRARRLRLSAPTAIQFYDVQDRLGCERPTEAVDWLLRNAKSAIDALSEPLETE-GDSSKQNFS

Query:  F---LSMATSVPSSSSSQFQSYPLQNFSQQGYFSVLSPMIFNASPMEFSGQEPPSSVSQTNVGTGFPSFPIWE
             S ++S  SSSSSQFQSYPLQNFSQ+G  SV  PMI NA+  EFSG +PP   SQ+N+G GFP FP+WE
Subjt:  F---LSMATSVPSSSSSQFQSYPLQNFSQQGYFSVLSPMIFNASPMEFSGQEPPSSVSQTNVGTGFPSFPIWE

A0A1S3B7T4 transcription factor TCP10-like4.7e-4665.68Show/hide
Query:  SLNDADENTAELGRRDGRLRST--SAGGKVFTSKGVRARRLRLSAPTAIQFYDVQDRLGCERPTEAVDWLLRNAKSAIDALSEPLETE-GDSSKQNFSFL
        SL+D D+  A++GRR+ RL S+  +  GKV+TSKG+RARRLRLSAPTAI+FYD+QDRLGC RPTEA+DWLL+NAK AIDALS PL+TE  D  KQ FS  
Subjt:  SLNDADENTAELGRRDGRLRST--SAGGKVFTSKGVRARRLRLSAPTAIQFYDVQDRLGCERPTEAVDWLLRNAKSAIDALSEPLETE-GDSSKQNFSFL

Query:  SMATSVP-SSSSSQFQSYPLQNFSQQGYFSVLSPMIFNASPMEFSGQEPPSSVSQTNVGTGFPSFPIWE
             VP SSSSSQFQSYPLQNFSQ+G  SV SPMI N +   FSG +PP   SQ+NVG GFP FP+WE
Subjt:  SMATSVP-SSSSSQFQSYPLQNFSQQGYFSVLSPMIFNASPMEFSGQEPPSSVSQTNVGTGFPSFPIWE

A0A5A7UTZ9 Transcription factor TCP10-like4.7e-4665.68Show/hide
Query:  SLNDADENTAELGRRDGRLRST--SAGGKVFTSKGVRARRLRLSAPTAIQFYDVQDRLGCERPTEAVDWLLRNAKSAIDALSEPLETE-GDSSKQNFSFL
        SL+D D+  A++GRR+ RL S+  +  GKV+TSKG+RARRLRLSAPTAI+FYD+QDRLGC RPTEA+DWLL+NAK AIDALS PL+TE  D  KQ FS  
Subjt:  SLNDADENTAELGRRDGRLRST--SAGGKVFTSKGVRARRLRLSAPTAIQFYDVQDRLGCERPTEAVDWLLRNAKSAIDALSEPLETE-GDSSKQNFSFL

Query:  SMATSVP-SSSSSQFQSYPLQNFSQQGYFSVLSPMIFNASPMEFSGQEPPSSVSQTNVGTGFPSFPIWE
             VP SSSSSQFQSYPLQNFSQ+G  SV SPMI N +   FSG +PP   SQ+NVG GFP FP+WE
Subjt:  SMATSVP-SSSSSQFQSYPLQNFSQQGYFSVLSPMIFNASPMEFSGQEPPSSVSQTNVGTGFPSFPIWE

A0A6J1KM30 transcription factor PCF8-like4.0e-4569.8Show/hide
Query:  RLRSTSAGGKVFTSKGVRARRLRLSAPTAIQFYDVQDRLGCERPTEAVDWLLRNAKSAIDALSEPLETEGDSSKQNFSFLSMATSVP-SSSSSQFQSYPL
        RLRS++  GKV+TSKG+RARRLRLSAPTAIQFYD+QDRLG  RPTEA+DWLL+NAKSAIDALS PLETE D  +   SF SMA+SVP SSSSSQF +YPL
Subjt:  RLRSTSAGGKVFTSKGVRARRLRLSAPTAIQFYDVQDRLGCERPTEAVDWLLRNAKSAIDALSEPLETEGDSSKQNFSFLSMATSVP-SSSSSQFQSYPL

Query:  QNFSQQGYFSVLSPMIFNASPMEFSGQEPPSSVSQTNVGTGFPSFPIWE
        +NF + G  SVLSPMI N +P EFSG +PP  +SQ+N  +G PSFP+WE
Subjt:  QNFSQQGYFSVLSPMIFNASPMEFSGQEPPSSVSQTNVGTGFPSFPIWE

D6MK40 Transcription factor (Fragment)7.3e-1554.26Show/hide
Query:  KVFTSKGVRARRLRLSAPTAIQFYDVQDRLGCERPTEAVDWLLRNAKSAIDALSEPLETEGDSSKQNFSFLSMATSVPSSSSSQFQSYPLQNFS
        KV T+KG+R RR+RLSA TAIQFYDVQDRLGC+RP++AVDWL++NAK+AID L E    E +SS     F    TSV    S+   ++P+ + S
Subjt:  KVFTSKGVRARRLRLSAPTAIQFYDVQDRLGCERPTEAVDWLLRNAKSAIDALSEPLETEGDSSKQNFSFLSMATSVPSSSSSQFQSYPLQNFS

SwissProt top hitse value%identityAlignment
A2WM14 Transcription factor PCF52.7e-1471.7Show/hide
Query:  KVFTSKGVRARRLRLSAPTAIQFYDVQDRLGCERPTEAVDWLLRNAKSAIDAL
        KV T++G R RR+RLSA TAIQFYDVQDRLG +RP++AVDWL++NAK AID L
Subjt:  KVFTSKGVRARRLRLSAPTAIQFYDVQDRLGCERPTEAVDWLLRNAKSAIDAL

A2WV68 Transcription factor PCF77.0e-1557.53Show/hide
Query:  GRLRSTSAG-----GKVFTSKGVRARRLRLSAPTAIQFYDVQDRLGCERPTEAVDWLLRNAKSAIDALSEPLE
        GR+  ++AG      KV T++G+R RR+RL+A TAI+FYDVQDRLG +RP++AVDWL+RNAK+AID L +  E
Subjt:  GRLRSTSAG-----GKVFTSKGVRARRLRLSAPTAIQFYDVQDRLGCERPTEAVDWLLRNAKSAIDALSEPLE

O82277 Transcription factor TCP103.2e-1566.67Show/hide
Query:  KVFTSKGVRARRLRLSAPTAIQFYDVQDRLGCERPTEAVDWLLRNAKSAIDALSEPLETEGDSSKQ
        KVFTSKG R RR+RLSA TAIQFYDVQDRLG +RP++AVDWL++ AK+AID L E  ET   +++Q
Subjt:  KVFTSKGVRARRLRLSAPTAIQFYDVQDRLGCERPTEAVDWLLRNAKSAIDALSEPLETEGDSSKQ

Q8LT05 Transcription factor PCF77.0e-1557.53Show/hide
Query:  GRLRSTSAG-----GKVFTSKGVRARRLRLSAPTAIQFYDVQDRLGCERPTEAVDWLLRNAKSAIDALSEPLE
        GR+  ++AG      KV T++G+R RR+RL+A TAI+FYDVQDRLG +RP++AVDWL+RNAK+AID L +  E
Subjt:  GRLRSTSAG-----GKVFTSKGVRARRLRLSAPTAIQFYDVQDRLGCERPTEAVDWLLRNAKSAIDALSEPLE

Q9MAH8 Transcription factor TCP34.1e-1563.24Show/hide
Query:  KVFTSKGVRARRLRLSAPTAIQFYDVQDRLGCERPTEAVDWLLRNAKSAIDALSE-PLETEGDSSKQN
        KV T+KG R RR+RLSAPTAIQFYDVQDRLG +RP++AVDWL+  AKSAID L++ P     D+ +Q+
Subjt:  KVFTSKGVRARRLRLSAPTAIQFYDVQDRLGCERPTEAVDWLLRNAKSAIDALSE-PLETEGDSSKQN

Arabidopsis top hitse value%identityAlignment
AT1G53230.1 TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 32.9e-1663.24Show/hide
Query:  KVFTSKGVRARRLRLSAPTAIQFYDVQDRLGCERPTEAVDWLLRNAKSAIDALSE-PLETEGDSSKQN
        KV T+KG R RR+RLSAPTAIQFYDVQDRLG +RP++AVDWL+  AKSAID L++ P     D+ +Q+
Subjt:  KVFTSKGVRARRLRLSAPTAIQFYDVQDRLGCERPTEAVDWLLRNAKSAIDALSE-PLETEGDSSKQN

AT2G31070.1 TCP domain protein 102.2e-1666.67Show/hide
Query:  KVFTSKGVRARRLRLSAPTAIQFYDVQDRLGCERPTEAVDWLLRNAKSAIDALSEPLETEGDSSKQ
        KVFTSKG R RR+RLSA TAIQFYDVQDRLG +RP++AVDWL++ AK+AID L E  ET   +++Q
Subjt:  KVFTSKGVRARRLRLSAPTAIQFYDVQDRLGCERPTEAVDWLLRNAKSAIDALSEPLETEGDSSKQ

AT3G15030.1 TCP family transcription factor 43.6e-1439.31Show/hide
Query:  KVFTSKGVRARRLRLSAPTAIQFYDVQDRLGCERPTEAVDWLLRNAKSAIDALSE-PLETEGDSSKQNFSFLSMATSVP--SSSSSQFQSYPLQNFSQQG
        KV T+KG R RR+RLSA TAIQFYDVQDRLG +RP++AVDWL++ AK++ID L+E P     D+ +     L+ A + P  +++ +Q    P     QQ 
Subjt:  KVFTSKGVRARRLRLSAPTAIQFYDVQDRLGCERPTEAVDWLLRNAKSAIDALSE-PLETEGDSSKQNFSFLSMATSVP--SSSSSQFQSYPLQNFSQQG

Query:  YFSVLSPMIFNASPMEFSGQE-----PPSSVSQTNVGTGFPSFPI
           +   + FN    E          PPS  S +   T    FP+
Subjt:  YFSVLSPMIFNASPMEFSGQE-----PPSSVSQTNVGTGFPSFPI

AT3G15030.2 TCP family transcription factor 43.6e-1439.31Show/hide
Query:  KVFTSKGVRARRLRLSAPTAIQFYDVQDRLGCERPTEAVDWLLRNAKSAIDALSE-PLETEGDSSKQNFSFLSMATSVP--SSSSSQFQSYPLQNFSQQG
        KV T+KG R RR+RLSA TAIQFYDVQDRLG +RP++AVDWL++ AK++ID L+E P     D+ +     L+ A + P  +++ +Q    P     QQ 
Subjt:  KVFTSKGVRARRLRLSAPTAIQFYDVQDRLGCERPTEAVDWLLRNAKSAIDALSE-PLETEGDSSKQNFSFLSMATSVP--SSSSSQFQSYPLQNFSQQG

Query:  YFSVLSPMIFNASPMEFSGQE-----PPSSVSQTNVGTGFPSFPI
           +   + FN    E          PPS  S +   T    FP+
Subjt:  YFSVLSPMIFNASPMEFSGQE-----PPSSVSQTNVGTGFPSFPI

AT3G15030.3 TCP family transcription factor 43.6e-1439.31Show/hide
Query:  KVFTSKGVRARRLRLSAPTAIQFYDVQDRLGCERPTEAVDWLLRNAKSAIDALSE-PLETEGDSSKQNFSFLSMATSVP--SSSSSQFQSYPLQNFSQQG
        KV T+KG R RR+RLSA TAIQFYDVQDRLG +RP++AVDWL++ AK++ID L+E P     D+ +     L+ A + P  +++ +Q    P     QQ 
Subjt:  KVFTSKGVRARRLRLSAPTAIQFYDVQDRLGCERPTEAVDWLLRNAKSAIDALSE-PLETEGDSSKQNFSFLSMATSVP--SSSSSQFQSYPLQNFSQQG

Query:  YFSVLSPMIFNASPMEFSGQE-----PPSSVSQTNVGTGFPSFPI
           +   + FN    E          PPS  S +   T    FP+
Subjt:  YFSVLSPMIFNASPMEFSGQE-----PPSSVSQTNVGTGFPSFPI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTTCTCAAAAGCGTTCCCTTAATGATGCAGATGAGAATACGGCGGAGCTTGGCCGGAGAGACGGTCGTCTCCGCTCGACCTCCGCCGGCGGCAAAGTTTTCACTTC
AAAAGGGGTCCGAGCAAGGAGGCTCCGGCTGTCGGCTCCTACCGCCATCCAATTCTACGACGTTCAGGATCGCCTGGGCTGTGAACGACCCACTGAAGCCGTCGATTGGC
TTCTTCGGAATGCCAAATCCGCCATTGATGCCCTCTCTGAACCGTTAGAAACAGAGGGCGACTCCAGTAAGCAGAATTTCAGCTTCCTCTCTATGGCTACTTCTGTTCCT
TCGTCTTCTTCCTCCCAGTTCCAGAGTTACCCACTTCAAAATTTCTCCCAACAAGGTTACTTCTCTGTTTTGAGTCCAATGATTTTTAATGCCTCGCCGATGGAATTTTC
CGGCCAGGAGCCGCCGTCGTCTGTAAGTCAGACCAATGTAGGAACTGGTTTTCCTTCCTTTCCGATATGGGAGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGGTTCTCAAAAGCGTTCCCTTAATGATGCAGATGAGAATACGGCGGAGCTTGGCCGGAGAGACGGTCGTCTCCGCTCGACCTCCGCCGGCGGCAAAGTTTTCACTTC
AAAAGGGGTCCGAGCAAGGAGGCTCCGGCTGTCGGCTCCTACCGCCATCCAATTCTACGACGTTCAGGATCGCCTGGGCTGTGAACGACCCACTGAAGCCGTCGATTGGC
TTCTTCGGAATGCCAAATCCGCCATTGATGCCCTCTCTGAACCGTTAGAAACAGAGGGCGACTCCAGTAAGCAGAATTTCAGCTTCCTCTCTATGGCTACTTCTGTTCCT
TCGTCTTCTTCCTCCCAGTTCCAGAGTTACCCACTTCAAAATTTCTCCCAACAAGGTTACTTCTCTGTTTTGAGTCCAATGATTTTTAATGCCTCGCCGATGGAATTTTC
CGGCCAGGAGCCGCCGTCGTCTGTAAGTCAGACCAATGTAGGAACTGGTTTTCCTTCCTTTCCGATATGGGAGTAG
Protein sequenceShow/hide protein sequence
MGSQKRSLNDADENTAELGRRDGRLRSTSAGGKVFTSKGVRARRLRLSAPTAIQFYDVQDRLGCERPTEAVDWLLRNAKSAIDALSEPLETEGDSSKQNFSFLSMATSVP
SSSSSQFQSYPLQNFSQQGYFSVLSPMIFNASPMEFSGQEPPSSVSQTNVGTGFPSFPIWE