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Tan0016667 (gene) of Snake gourd v1 genome

Gene IDTan0016667
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionDNA helicase
Genome locationLG01:116676047..116678296
RNA-Seq ExpressionTan0016667
SyntenyTan0016667
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
GO:0004386 - helicase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAB4267529.1 unnamed protein product [Prunus armeniaca]6.1e-1080.43Show/hide
Query:  MALMKGEPLVRKLAVFAKYVVLPGAMAAALVYSPPDYAYYKNDDKS
        MALM+GEPLV KLAV AKYVVLPGAM AAL+YSPPDY   KND KS
Subjt:  MALMKGEPLVRKLAVFAKYVVLPGAMAAALVYSPPDYAYYKNDDKS

KAF4352412.1 hypothetical protein G4B88_018844 [Cannabis sativa]6.7e-0965.31Show/hide
Query:  MALMKGEPLVRKLAVFAKYVVLPGAMAAALVYSPPDYAYYKNDDKSRNK
        MA +KGEPL+RKLA+ +KY VLPGAM AALVYSPPD+ YY N++   +K
Subjt:  MALMKGEPLVRKLAVFAKYVVLPGAMAAALVYSPPDYAYYKNDDKSRNK

KAG7024085.1 hypothetical protein SDJN02_12898, partial [Cucurbita argyrosperma subsp. argyrosperma]1.2e-1864.63Show/hide
Query:  MALMKGEPLVRKLAVFAKYVVLPGAMAAALVYSPPDYAYYKNDDKSRNKLGPYDHVALLLQSCIPLMLIMNPNFDFDGPMPY
        MALM+GEPLVRKLAVFAKY VLP AMAAAL+YSPPDY ++ +D      + P DHV L LQSCIPLMLIMN     DG + +
Subjt:  MALMKGEPLVRKLAVFAKYVVLPGAMAAALVYSPPDYAYYKNDDKSRNKLGPYDHVALLLQSCIPLMLIMNPNFDFDGPMPY

KAG7037970.1 hypothetical protein SDJN02_01603, partial [Cucurbita argyrosperma subsp. argyrosperma]5.3e-1497.73Show/hide
Query:  MALMKGEPLVRKLAVFAKYVVLPGAMAAALVYSPPDYAYYKNDD
        MALMKGEPLVRKLAVFAKYVVLPGAMAAALVYSPPDYAY+KNDD
Subjt:  MALMKGEPLVRKLAVFAKYVVLPGAMAAALVYSPPDYAYYKNDD

KGN55532.1 hypothetical protein Csa_011995 [Cucumis sativus]2.7e-1080Show/hide
Query:  MALMKGEPLVRKLAVFAKYVVLPGAMAAALVYSPPDYAYYKNDDK
        MALMKGEPL+RKLAVFA Y+VLPGAMAAAL+YSPPDY Y K ++K
Subjt:  MALMKGEPLVRKLAVFAKYVVLPGAMAAALVYSPPDYAYYKNDDK

TrEMBL top hitse value%identityAlignment
A0A0A0L4N8 Uncharacterized protein1.3e-1080Show/hide
Query:  MALMKGEPLVRKLAVFAKYVVLPGAMAAALVYSPPDYAYYKNDDK
        MALMKGEPL+RKLAVFA Y+VLPGAMAAAL+YSPPDY Y K ++K
Subjt:  MALMKGEPLVRKLAVFAKYVVLPGAMAAALVYSPPDYAYYKNDDK

A0A2R6PZ99 DNA helicase1.2e-0873.33Show/hide
Query:  MALMKGEPLVRKLAVFAKYVVLPGAMAAALVYSPPDYAYYKNDDK
        M  M+GEPLV KLAV AKY VLPGAM AAL+YSPPDYAY K  D+
Subjt:  MALMKGEPLVRKLAVFAKYVVLPGAMAAALVYSPPDYAYYKNDDK

A0A314KKJ1 Uncharacterized protein2.1e-0871.74Show/hide
Query:  MALMKGEPLVRKLAVFAKYVVLPGAMAAALVYSPPDYAYYKNDDKS
        MALMKGEPLVRK+A+ AKYVV PGAMAAA++YSPP YA Y +  +S
Subjt:  MALMKGEPLVRKLAVFAKYVVLPGAMAAALVYSPPDYAYYKNDDKS

A0A6J5TUT5 Uncharacterized protein2.9e-1080.43Show/hide
Query:  MALMKGEPLVRKLAVFAKYVVLPGAMAAALVYSPPDYAYYKNDDKS
        MALM+GEPLV KLAV AKYVVLPGAM AAL+YSPPDY   KND KS
Subjt:  MALMKGEPLVRKLAVFAKYVVLPGAMAAALVYSPPDYAYYKNDDKS

A0A7J6E203 Uncharacterized protein3.3e-0965.31Show/hide
Query:  MALMKGEPLVRKLAVFAKYVVLPGAMAAALVYSPPDYAYYKNDDKSRNK
        MA +KGEPL+RKLA+ +KY VLPGAM AALVYSPPD+ YY N++   +K
Subjt:  MALMKGEPLVRKLAVFAKYVVLPGAMAAALVYSPPDYAYYKNDDKSRNK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGTTGATGAAGGGAGAGCCGCTGGTGAGGAAGCTCGCCGTGTTCGCCAAATACGTTGTTCTTCCGGGAGCCATGGCCGCCGCTCTCGTTTACTCTCCTCCCGATTA
CGCTTACTACAAGAATGACGATAAATCACGGAATAAACTAGGACCGTATGATCATGTCGCCTTGCTTTTGCAGAGTTGTATTCCTCTTATGTTGATAATGAATCCAAACT
TTGATTTTGATGGCCCCATGCCGTACTCGTTTTATTTTGTCATTACTCCGGCTGTGGTGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCGTTGATGAAGGGAGAGCCGCTGGTGAGGAAGCTCGCCGTGTTCGCCAAATACGTTGTTCTTCCGGGAGCCATGGCCGCCGCTCTCGTTTACTCTCCTCCCGATTA
CGCTTACTACAAGAATGACGATAAATCACGGAATAAACTAGGACCGTATGATCATGTCGCCTTGCTTTTGCAGAGTTGTATTCCTCTTATGTTGATAATGAATCCAAACT
TTGATTTTGATGGCCCCATGCCGTACTCGTTTTATTTTGTCATTACTCCGGCTGTGGTGTAG
Protein sequenceShow/hide protein sequence
MALMKGEPLVRKLAVFAKYVVLPGAMAAALVYSPPDYAYYKNDDKSRNKLGPYDHVALLLQSCIPLMLIMNPNFDFDGPMPYSFYFVITPAVV