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Tan0016676 (gene) of Snake gourd v1 genome

Gene IDTan0016676
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionRALF
Genome locationLG01:71758378..71758824
RNA-Seq ExpressionTan0016676
SyntenyTan0016676
Gene Ontology termsNA
InterPro domainsIPR008801 - Rapid ALkalinization Factor


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8650705.1 hypothetical protein Csa_010421 [Cucumis sativus]1.4e-1351.81Show/hide
Query:  MAIIKGGTLIFVGILCVCIDTIEITNA-NYIEYGPL-KGDISPGCSAKHPRTLWKTQVNPYQRGCSAIDRCRGGSNVIDGDEK
        M + K  TL+F+GIL V  D I ITNA  +I+YG +  GD+SPGCS  HP        NPYQRGC+ IDRCR G+++ID +E+
Subjt:  MAIIKGGTLIFVGILCVCIDTIEITNA-NYIEYGPL-KGDISPGCSAKHPRTLWKTQVNPYQRGCSAIDRCRGGSNVIDGDEK

XP_022136918.1 uncharacterized protein LOC111008495 [Momordica charantia]4.1e-1642.68Show/hide
Query:  KGGTLIFVGILCVCIDTIEITNA-NYIEYGPLKGDISPGCSAKHPRTLWKTQVNPYQRGCSAIDRCRGGSNVIDGDEKI---------DDKENDIYGKEK
        KG  L+F+GIL V    IEITNA  YI Y  LK D+SPGCS KHP      + N YQRGCSAI+RCR   + ID +EKI         DD+++++ G  +
Subjt:  KGGTLIFVGILCVCIDTIEITNA-NYIEYGPLKGDISPGCSAKHPRTLWKTQVNPYQRGCSAIDRCRGGSNVIDGDEKI---------DDKENDIYGKEK

Query:  R--IKTDDKK---------DIVDGEIETIHNDDARNGVIGSEEKSVETNTLKINITN
           IK DDK+         DI D E +T+    A + +  SEEK    N LK+++ N
Subjt:  R--IKTDDKK---------DIVDGEIETIHNDDARNGVIGSEEKSVETNTLKINITN

XP_022159360.1 uncharacterized protein LOC111025777 [Momordica charantia]6.5e-2250Show/hide
Query:  MAIIKGGTLIFVGILCVCIDTIEITNA-NYIEYGPLKGDISPGCSAKHPRTLWKTQVNPYQRGCSAIDRCRGGSNVIDGDEKI--DDKENDIY-GKEKRI
        MAI KG   IFVGIL  C+  I+ITNA  +I Y PL+GD+SPGCS  HP        NPY+RGC++IDRCRGGS++ID  E I   D EN I   K K +
Subjt:  MAIIKGGTLIFVGILCVCIDTIEITNA-NYIEYGPLKGDISPGCSAKHPRTLWKTQVNPYQRGCSAIDRCRGGSNVIDGDEKI--DDKENDIY-GKEKRI

Query:  KTDDKKDIVDGEIETIHNDDARNGVIGSEEKSVETN
        K+D K D++ G  E I   DA N V  S+EK + ++
Subjt:  KTDDKKDIVDGEIETIHNDDARNGVIGSEEKSVETN

XP_022942029.1 auxin-induced in root cultures protein 12-like [Cucurbita moschata]1.3e-1443.22Show/hide
Query:  MAIIKGGTLIFVGILCVCIDTIEIT--NANYIEYGPLKGDISPGCSAKHPRTLWKTQVNPYQRGCSAIDRCRGG-SNVIDGDEKIDDKENDIYGKEKRIK
        MAI     L+  G L +CID + IT  NAN I+Y  ++ D+SPGC+ KHP      Q NPY+RGC+AI++CRG  S V++  EKID K NDI   E +  
Subjt:  MAIIKGGTLIFVGILCVCIDTIEIT--NANYIEYGPLKGDISPGCSAKHPRTLWKTQVNPYQRGCSAIDRCRGG-SNVIDGDEKIDDKENDIYGKEKRIK

Query:  TDDKKDIVDGEIETIHND
        TD+    + G++ T+ ++
Subjt:  TDDKKDIVDGEIETIHND

XP_022961577.1 protein RALF-like 9 [Cucurbita moschata]3.9e-1145.71Show/hide
Query:  KGGTLIFVGILCVCIDTIEITNA-NYIEYGPLKGDISPGCSAKHPRTLWKTQVNPYQRGCSAIDRCRGGSNVIDGDEKIDDKENDIYGKEKRIKTDDKKD
        KG  +IF+ +L V I+ IEITNA +YI Y PLK +    CS  HP     T  NPYQRGC+ IDRCRG     + D+ ID+ E DI         D++ D
Subjt:  KGGTLIFVGILCVCIDTIEITNA-NYIEYGPLKGDISPGCSAKHPRTLWKTQVNPYQRGCSAIDRCRGGSNVIDGDEKIDDKENDIYGKEKRIKTDDKKD

Query:  IVDGE
        IVD +
Subjt:  IVDGE

TrEMBL top hitse value%identityAlignment
A0A0A0L8B1 Uncharacterized protein7.0e-1451.81Show/hide
Query:  MAIIKGGTLIFVGILCVCIDTIEITNA-NYIEYGPL-KGDISPGCSAKHPRTLWKTQVNPYQRGCSAIDRCRGGSNVIDGDEK
        M + K  TL+F+GIL V  D I ITNA  +I+YG +  GD+SPGCS  HP        NPYQRGC+ IDRCR G+++ID +E+
Subjt:  MAIIKGGTLIFVGILCVCIDTIEITNA-NYIEYGPL-KGDISPGCSAKHPRTLWKTQVNPYQRGCSAIDRCRGGSNVIDGDEK

A0A6J1C8U5 uncharacterized protein LOC1110084952.0e-1642.68Show/hide
Query:  KGGTLIFVGILCVCIDTIEITNA-NYIEYGPLKGDISPGCSAKHPRTLWKTQVNPYQRGCSAIDRCRGGSNVIDGDEKI---------DDKENDIYGKEK
        KG  L+F+GIL V    IEITNA  YI Y  LK D+SPGCS KHP      + N YQRGCSAI+RCR   + ID +EKI         DD+++++ G  +
Subjt:  KGGTLIFVGILCVCIDTIEITNA-NYIEYGPLKGDISPGCSAKHPRTLWKTQVNPYQRGCSAIDRCRGGSNVIDGDEKI---------DDKENDIYGKEK

Query:  R--IKTDDKK---------DIVDGEIETIHNDDARNGVIGSEEKSVETNTLKINITN
           IK DDK+         DI D E +T+    A + +  SEEK    N LK+++ N
Subjt:  R--IKTDDKK---------DIVDGEIETIHNDDARNGVIGSEEKSVETNTLKINITN

A0A6J1DYH7 uncharacterized protein LOC1110257773.1e-2250Show/hide
Query:  MAIIKGGTLIFVGILCVCIDTIEITNA-NYIEYGPLKGDISPGCSAKHPRTLWKTQVNPYQRGCSAIDRCRGGSNVIDGDEKI--DDKENDIY-GKEKRI
        MAI KG   IFVGIL  C+  I+ITNA  +I Y PL+GD+SPGCS  HP        NPY+RGC++IDRCRGGS++ID  E I   D EN I   K K +
Subjt:  MAIIKGGTLIFVGILCVCIDTIEITNA-NYIEYGPLKGDISPGCSAKHPRTLWKTQVNPYQRGCSAIDRCRGGSNVIDGDEKI--DDKENDIY-GKEKRI

Query:  KTDDKKDIVDGEIETIHNDDARNGVIGSEEKSVETN
        K+D K D++ G  E I   DA N V  S+EK + ++
Subjt:  KTDDKKDIVDGEIETIHNDDARNGVIGSEEKSVETN

A0A6J1FQ53 auxin-induced in root cultures protein 12-like6.3e-1543.22Show/hide
Query:  MAIIKGGTLIFVGILCVCIDTIEIT--NANYIEYGPLKGDISPGCSAKHPRTLWKTQVNPYQRGCSAIDRCRGG-SNVIDGDEKIDDKENDIYGKEKRIK
        MAI     L+  G L +CID + IT  NAN I+Y  ++ D+SPGC+ KHP      Q NPY+RGC+AI++CRG  S V++  EKID K NDI   E +  
Subjt:  MAIIKGGTLIFVGILCVCIDTIEIT--NANYIEYGPLKGDISPGCSAKHPRTLWKTQVNPYQRGCSAIDRCRGG-SNVIDGDEKIDDKENDIYGKEKRIK

Query:  TDDKKDIVDGEIETIHND
        TD+    + G++ T+ ++
Subjt:  TDDKKDIVDGEIETIHND

A0A6J1HAJ8 protein RALF-like 91.9e-1145.71Show/hide
Query:  KGGTLIFVGILCVCIDTIEITNA-NYIEYGPLKGDISPGCSAKHPRTLWKTQVNPYQRGCSAIDRCRGGSNVIDGDEKIDDKENDIYGKEKRIKTDDKKD
        KG  +IF+ +L V I+ IEITNA +YI Y PLK +    CS  HP     T  NPYQRGC+ IDRCRG     + D+ ID+ E DI         D++ D
Subjt:  KGGTLIFVGILCVCIDTIEITNA-NYIEYGPLKGDISPGCSAKHPRTLWKTQVNPYQRGCSAIDRCRGGSNVIDGDEKIDDKENDIYGKEKRIKTDDKKD

Query:  IVDGE
        IVD +
Subjt:  IVDGE

SwissProt top hitse value%identityAlignment
A8MQM2 Protein RALF-like 62.6e-0547.62Show/hide
Query:  YIEYGPLKGDISPGCSAKHPRTLWKTQVNPYQRGCSAIDRCR
        YI Y  +KGDI PGCS+K+P+   K     Y RGC    RC+
Subjt:  YIEYGPLKGDISPGCSAKHPRTLWKTQVNPYQRGCSAIDRCR

A8MQM7 Protein RALF-like 159.8e-0539.66Show/hide
Query:  ILCVCIDTIEITNANYIEY-GPLKGDISPGCSAKHPRTLWKTQVNPYQRGCSAIDRCR
        IL + +   ++    YI Y G   GD +  C   HP T  K   NPY+RGC  I+RCR
Subjt:  ILCVCIDTIEITNANYIEY-GPLKGDISPGCSAKHPRTLWKTQVNPYQRGCSAIDRCR

F4ISE1 Protein RALF-like 123.7e-0438.46Show/hide
Query:  VGILCVCIDTI--EITNANYIEYGPLK----GDISPGCSAKHPRTLWKTQVNPYQRGCSAIDRCR
        +G+L +C   I   + + NYIEYG +      +  PGC+         T VN Y RGCS I RCR
Subjt:  VGILCVCIDTI--EITNANYIEYGPLK----GDISPGCSAKHPRTLWKTQVNPYQRGCSAIDRCR

O64466 Protein RALF-like 114.8e-0436.36Show/hide
Query:  LIFVGILCVCIDTIEITNANYIEYGPLK----GDISPGCSAKHPRTLWKTQVNPYQRGCSAIDRCR
        LI + ++C  +    + + NYIEYG +      +  PGC+         T VN Y RGCS I RCR
Subjt:  LIFVGILCVCIDTIEITNANYIEYGPLK----GDISPGCSAKHPRTLWKTQVNPYQRGCSAIDRCR

Q3ECL0 Protein RALF-like 92.3e-0642.42Show/hide
Query:  TLIFVGILCVCIDTIEITNANYIEYGPL-KGDISPGCSAKHPRTLWKTQVNPYQRGCSAIDRCRGG
        +L  V  L +    +E T   YI Y  + +GD +  C   HP T  K + NPYQRGC  I+RCRGG
Subjt:  TLIFVGILCVCIDTIEITNANYIEYGPL-KGDISPGCSAKHPRTLWKTQVNPYQRGCSAIDRCRGG

Arabidopsis top hitse value%identityAlignment
AT1G60625.1 RALF-like 61.8e-0647.62Show/hide
Query:  YIEYGPLKGDISPGCSAKHPRTLWKTQVNPYQRGCSAIDRCR
        YI Y  +KGDI PGCS+K+P+   K     Y RGC    RC+
Subjt:  YIEYGPLKGDISPGCSAKHPRTLWKTQVNPYQRGCSAIDRCR

AT1G61566.1 ralf-like 91.6e-0742.42Show/hide
Query:  TLIFVGILCVCIDTIEITNANYIEYGPL-KGDISPGCSAKHPRTLWKTQVNPYQRGCSAIDRCRGG
        +L  V  L +    +E T   YI Y  + +GD +  C   HP T  K + NPYQRGC  I+RCRGG
Subjt:  TLIFVGILCVCIDTIEITNANYIEYGPL-KGDISPGCSAKHPRTLWKTQVNPYQRGCSAIDRCRGG

AT2G19030.1 ralf-like 113.4e-0536.36Show/hide
Query:  LIFVGILCVCIDTIEITNANYIEYGPLK----GDISPGCSAKHPRTLWKTQVNPYQRGCSAIDRCR
        LI + ++C  +    + + NYIEYG +      +  PGC+         T VN Y RGCS I RCR
Subjt:  LIFVGILCVCIDTIEITNANYIEYGPLK----GDISPGCSAKHPRTLWKTQVNPYQRGCSAIDRCR

AT2G19040.1 RALF-like 122.6e-0538.46Show/hide
Query:  VGILCVCIDTI--EITNANYIEYGPLK----GDISPGCSAKHPRTLWKTQVNPYQRGCSAIDRCR
        +G+L +C   I   + + NYIEYG +      +  PGC+         T VN Y RGCS I RCR
Subjt:  VGILCVCIDTI--EITNANYIEYGPLK----GDISPGCSAKHPRTLWKTQVNPYQRGCSAIDRCR

AT2G22055.1 RALF-like 156.9e-0639.66Show/hide
Query:  ILCVCIDTIEITNANYIEY-GPLKGDISPGCSAKHPRTLWKTQVNPYQRGCSAIDRCR
        IL + +   ++    YI Y G   GD +  C   HP T  K   NPY+RGC  I+RCR
Subjt:  ILCVCIDTIEITNANYIEY-GPLKGDISPGCSAKHPRTLWKTQVNPYQRGCSAIDRCR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCATCATCAAAGGAGGCACGCTTATTTTTGTTGGCATTCTCTGTGTTTGTATTGACACGATTGAGATTACAAATGCAAATTACATCGAGTATGGTCCTCTAAAAGG
TGATATTAGTCCTGGATGTAGCGCTAAACATCCACGAACTTTGTGGAAGACACAAGTAAACCCATATCAAAGAGGTTGTAGTGCAATCGACCGTTGCAGAGGAGGATCTA
ATGTCATAGATGGTGATGAAAAAATAGACGATAAAGAGAATGATATATATGGTAAAGAAAAGAGGATCAAGACCGATGACAAAAAAGATATTGTGGATGGTGAAATAGAA
ACGATTCATAACGACGATGCAAGAAATGGTGTTATAGGCAGTGAAGAAAAGAGTGTTGAAACTAATACACTCAAGATTAACATCACAAATGTTAACATCCCAAAAAAAAA
AGATTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCCATCATCAAAGGAGGCACGCTTATTTTTGTTGGCATTCTCTGTGTTTGTATTGACACGATTGAGATTACAAATGCAAATTACATCGAGTATGGTCCTCTAAAAGG
TGATATTAGTCCTGGATGTAGCGCTAAACATCCACGAACTTTGTGGAAGACACAAGTAAACCCATATCAAAGAGGTTGTAGTGCAATCGACCGTTGCAGAGGAGGATCTA
ATGTCATAGATGGTGATGAAAAAATAGACGATAAAGAGAATGATATATATGGTAAAGAAAAGAGGATCAAGACCGATGACAAAAAAGATATTGTGGATGGTGAAATAGAA
ACGATTCATAACGACGATGCAAGAAATGGTGTTATAGGCAGTGAAGAAAAGAGTGTTGAAACTAATACACTCAAGATTAACATCACAAATGTTAACATCCCAAAAAAAAA
AGATTAA
Protein sequenceShow/hide protein sequence
MAIIKGGTLIFVGILCVCIDTIEITNANYIEYGPLKGDISPGCSAKHPRTLWKTQVNPYQRGCSAIDRCRGGSNVIDGDEKIDDKENDIYGKEKRIKTDDKKDIVDGEIE
TIHNDDARNGVIGSEEKSVETNTLKINITNVNIPKKKD