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Tan0016707 (gene) of Snake gourd v1 genome

Gene IDTan0016707
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionUnknown protein
Genome locationLG10:40639626..40640107
RNA-Seq ExpressionTan0016707
SyntenyTan0016707
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8651190.1 hypothetical protein Csa_001669 [Cucumis sativus]1.3e-0851.28Show/hide
Query:  MASLVLLLSELVRHHNTNPDYWLTLPLPPP-----------------PPSDC----HNNSRISVDETQMDEFLKESRV
        MASL+LLLS+L+RHH+TNPDY LTLP PP                  P SDC    +  +RI  DE  MDEFLKESR+
Subjt:  MASLVLLLSELVRHHNTNPDYWLTLPLPPP-----------------PPSDC----HNNSRISVDETQMDEFLKESRV

KAG6580906.1 hypothetical protein SDJN03_20908, partial [Cucurbita argyrosperma subsp. sororia]3.0e-0891.67Show/hide
Query:  MASLVLLLSELVRHHNTNPDYWLTLPLP---PPPPS
        MASLVLLLSELVRHHNTNPDYWLTLPLP   PPPPS
Subjt:  MASLVLLLSELVRHHNTNPDYWLTLPLP---PPPPS

PON39745.1 hypothetical protein PanWU01x14_302520 [Parasponia andersonii]2.4e-0540.24Show/hide
Query:  MASLVLLLSELVRHHNTNPDYWLTLPLPPPPPSDCHNNSRISV------------------DETQMDEFLKESRVWVDLIWP
        MASL+LLLSELV HHN +PD+W+ L  P    S   ++S  +                   D    +  LKESRV VDL+WP
Subjt:  MASLVLLLSELVRHHNTNPDYWLTLPLPPPPPSDCHNNSRISV------------------DETQMDEFLKESRVWVDLIWP

PON93800.1 hypothetical protein TorRG33x02_105030 [Trema orientale]1.1e-0540.23Show/hide
Query:  MASLVLLLSELVRHHNTNPDYWLTLPLPPPPPSDCHNNSRIS-----------------------VDETQMDEFLKESRVWVDLIWP
        MASL+LLLSELV HHN +PD+W+ L  PP   S   ++S  S                        D    +  LKESRV VDL+WP
Subjt:  MASLVLLLSELVRHHNTNPDYWLTLPLPPPPPSDCHNNSRIS-----------------------VDETQMDEFLKESRVWVDLIWP

XP_038904495.1 uncharacterized WD repeat-containing protein C2A9.03-like [Benincasa hispida]8.2e-1464.38Show/hide
Query:  MASLVLLLSELVRHHNTNPDYWLTLPLPPPP---------------PSD-CHNN-SRISVDETQMDEFLKESR
        MASLVLLLSEL+RHHNTNPDYWLT+PLPPPP               PS+ C++N SRI  DET +DEFLKESR
Subjt:  MASLVLLLSELVRHHNTNPDYWLTLPLPPPP---------------PSD-CHNN-SRISVDETQMDEFLKESR

TrEMBL top hitse value%identityAlignment
A0A0A0LHI4 Uncharacterized protein5.7e-1355.29Show/hide
Query:  MASLVLLLSELVRHHNTNPDYWLTLPLPPP-----------------PPSDC----HNNSRISVDETQMDEFLKESRVWVDLIWP
        MASL+LLLS+L+RHH+TNPDY LTLP PP                  P SDC    +  +RI  DE  MDEFLKESRV VDLIWP
Subjt:  MASLVLLLSELVRHHNTNPDYWLTLPLPPP-----------------PPSDC----HNNSRISVDETQMDEFLKESRVWVDLIWP

A0A2P5AT80 Uncharacterized protein1.2e-0540.24Show/hide
Query:  MASLVLLLSELVRHHNTNPDYWLTLPLPPPPPSDCHNNSRISV------------------DETQMDEFLKESRVWVDLIWP
        MASL+LLLSELV HHN +PD+W+ L  P    S   ++S  +                   D    +  LKESRV VDL+WP
Subjt:  MASLVLLLSELVRHHNTNPDYWLTLPLPPPPPSDCHNNSRISV------------------DETQMDEFLKESRVWVDLIWP

A0A2P5F7L7 Uncharacterized protein5.2e-0640.23Show/hide
Query:  MASLVLLLSELVRHHNTNPDYWLTLPLPPPPPSDCHNNSRIS-----------------------VDETQMDEFLKESRVWVDLIWP
        MASL+LLLSELV HHN +PD+W+ L  PP   S   ++S  S                        D    +  LKESRV VDL+WP
Subjt:  MASLVLLLSELVRHHNTNPDYWLTLPLPPPPPSDCHNNSRIS-----------------------VDETQMDEFLKESRVWVDLIWP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCTCTCTCGTCCTTCTCCTCTCCGAACTCGTCCGCCACCACAACACCAATCCCGATTACTGGCTCACTCTTCCTCTTCCGCCGCCACCGCCGAGTGACTGTCACAA
CAACAGCCGGATCTCCGTCGATGAAACTCAAATGGATGAATTTCTCAAGGAATCTAGGGTTTGGGTTGATTTGATTTGGCCCTAG
mRNA sequenceShow/hide mRNA sequence
TCTAAGTCTAAGCATTCAATTCCCCGTTTCATCTCTTTCCTTATTAATAATCCCCTCTTCTCATTAAATTCCCACCGCTTTCCTTTTCCCTTAAGATCTTCAAATCCAAA
TCCTCCTTCCTTTTCCAATGGCCTCTCTCGTCCTTCTCCTCTCCGAACTCGTCCGCCACCACAACACCAATCCCGATTACTGGCTCACTCTTCCTCTTCCGCCGCCACCG
CCGAGTGACTGTCACAACAACAGCCGGATCTCCGTCGATGAAACTCAAATGGATGAATTTCTCAAGGAATCTAGGGTTTGGGTTGATTTGATTTGGCCCTAGCTAATTTC
AATTTCAACTTACTTCCACTCCTGGATTTTGCTTCCTTCTCCTTCTGTTCTTGCTTTGTAATGTCGATTTATTTGTTTTATCCTCAATTTCGAGGGGGAAATTTTCATCG
ATCTGTAAAGATAATGGTGGAAGTGAGTTCTATTTGCTGAAA
Protein sequenceShow/hide protein sequence
MASLVLLLSELVRHHNTNPDYWLTLPLPPPPPSDCHNNSRISVDETQMDEFLKESRVWVDLIWP