CuGenDBv2

Gene ID	Tan0016756
Organism	Trichosanthes anguina (Snake gourd v1)
Description	Chloroplast envelope membrane protein
Genome location	LG05:28590661..28591283
RNA-Seq Expression	Tan0016756
Synteny	Tan0016756
Gene Ontology terms	GO:0009536 - plastid (cellular component) GO:0016021 - integral component of membrane (cellular component)
InterPro domains	IPR004282 - Chloroplast envelope membrane protein, CemA

Homology

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GenBank top hits

e value

%identity

Alignment

YP_009456158.1 envelope membrane protein [Lagenaria siceraria]

6.5e-49

58.11

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Query:  MAEKKALIPLLYFASIVFLP--------------------------------EKSMVKKSYRIKGTLSLGQNA----------------KETIQLIKMHN
        MA+KKA IPLLY ASIVFLP                                EKS++KK   ++    L +                  KETIQLIKMHN
Subjt:  MAEKKALIPLLYFASIVFLP--------------------------------EKSMVKKSYRIKGTLSLGQNA----------------KETIQLIKMHN

Query:  EDCIHTILQFSTNIICFVILSGYSILDNEELVILNSWVQEFLYNLSDTIKAFSILLLTDLY-------------------FRFSCNDQIISGLVSTFPII
        ED IHTIL FSTNIICFVILSGYSIL NEELVILNSWVQEFLYNLSDTIKAFSILLLTDL                    F FS NDQIISGLVSTFP+I
Subjt:  EDCIHTILQFSTNIICFVILSGYSILDNEELVILNSWVQEFLYNLSDTIKAFSILLLTDLY-------------------FRFSCNDQIISGLVSTFPII

Query:  LDTIFKYWIFRYLNRVSSSLVV
        LDTIFKYWIFRYLNRVS SLVV
Subjt:  LDTIFKYWIFRYLNRVSSSLVV

YP_009752339.1 envelope membrane carbon uptake protein [Bryonia marmorata]

6.5e-49

58.11

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Query:  MAEKKALIPLLYFASIVFLP--------------------------------EKSMVKKSYRIKGTLSLGQNA----------------KETIQLIKMHN
        MA+KKA IPLLY ASIVFLP                                EKS++KK   ++    L +                  KETIQLIKMHN
Subjt:  MAEKKALIPLLYFASIVFLP--------------------------------EKSMVKKSYRIKGTLSLGQNA----------------KETIQLIKMHN

Query:  EDCIHTILQFSTNIICFVILSGYSILDNEELVILNSWVQEFLYNLSDTIKAFSILLLTDLY-------------------FRFSCNDQIISGLVSTFPII
        ED IHTIL FSTNIICFVILSGYSIL NEELVILNSWVQEFLYNLSDTIKAFSILLLTDL                    F FS NDQIISGLVSTFP+I
Subjt:  EDCIHTILQFSTNIICFVILSGYSILDNEELVILNSWVQEFLYNLSDTIKAFSILLLTDLY-------------------FRFSCNDQIISGLVSTFPII

Query:  LDTIFKYWIFRYLNRVSSSLVV
        LDTIFKYWIFRYLNRVS SLVV
Subjt:  LDTIFKYWIFRYLNRVSSSLVV

YP_009752593.1 envelope membrane carbon uptake protein [Trichosanthes homophylla]

6.5e-49

58.11

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Query:  MAEKKALIPLLYFASIVFLP--------------------------------EKSMVKKSYRIKGTLSLGQNA----------------KETIQLIKMHN
        MA+KKA IPLLY ASIVFLP                                EKS++KK   ++    L +                  KETIQLIKMHN
Subjt:  MAEKKALIPLLYFASIVFLP--------------------------------EKSMVKKSYRIKGTLSLGQNA----------------KETIQLIKMHN

Query:  EDCIHTILQFSTNIICFVILSGYSILDNEELVILNSWVQEFLYNLSDTIKAFSILLLTDLY-------------------FRFSCNDQIISGLVSTFPII
        ED IHTIL FSTNIICFVILSGYSIL NEELVILNSWVQEFLYNLSDTIKAFSILLLTDL                    F FS NDQIISGLVSTFP+I
Subjt:  EDCIHTILQFSTNIICFVILSGYSILDNEELVILNSWVQEFLYNLSDTIKAFSILLLTDLY-------------------FRFSCNDQIISGLVSTFPII

Query:  LDTIFKYWIFRYLNRVSSSLVV
        LDTIFKYWIFRYLNRVS SLVV
Subjt:  LDTIFKYWIFRYLNRVSSSLVV

YP_009753270.1 envelope membrane carbon uptake protein [Nothoalsomitra suberosa]

6.5e-49

58.11

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Query:  MAEKKALIPLLYFASIVFLP--------------------------------EKSMVKKSYRIKGTLSLGQNA----------------KETIQLIKMHN
        MA+KKA IPLLY ASIVFLP                                EKS++KK   ++    L +                  KETIQLIKMHN
Subjt:  MAEKKALIPLLYFASIVFLP--------------------------------EKSMVKKSYRIKGTLSLGQNA----------------KETIQLIKMHN

Query:  EDCIHTILQFSTNIICFVILSGYSILDNEELVILNSWVQEFLYNLSDTIKAFSILLLTDLY-------------------FRFSCNDQIISGLVSTFPII
        ED IHTIL FSTNIICFVILSGYSIL NEELVILNSWVQEFLYNLSDTIKAFSILLLTDL                    F FS NDQIISGLVSTFP+I
Subjt:  EDCIHTILQFSTNIICFVILSGYSILDNEELVILNSWVQEFLYNLSDTIKAFSILLLTDLY-------------------FRFSCNDQIISGLVSTFPII

Query:  LDTIFKYWIFRYLNRVSSSLVV
        LDTIFKYWIFRYLNRVS SLVV
Subjt:  LDTIFKYWIFRYLNRVSSSLVV

YP_009753632.1 envelope membrane carbon uptake protein [Trichosanthes wallichiana]

6.5e-49

58.11

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Query:  MAEKKALIPLLYFASIVFLP--------------------------------EKSMVKKSYRIKGTLSLGQN----------------AKETIQLIKMHN
        MA+KKA IPLLY ASIVFLP                                EKS++KK   ++    L +                  KETIQLIKMHN
Subjt:  MAEKKALIPLLYFASIVFLP--------------------------------EKSMVKKSYRIKGTLSLGQN----------------AKETIQLIKMHN

Query:  EDCIHTILQFSTNIICFVILSGYSILDNEELVILNSWVQEFLYNLSDTIKAFSILLLTDLY-------------------FRFSCNDQIISGLVSTFPII
        ED IHTIL FSTNIICFVILSGYSIL NEELVILNSWVQEFLYNLSDTIKAFSILLLTDL                    F FS NDQIISGLVSTFP+I
Subjt:  EDCIHTILQFSTNIICFVILSGYSILDNEELVILNSWVQEFLYNLSDTIKAFSILLLTDLY-------------------FRFSCNDQIISGLVSTFPII

Query:  LDTIFKYWIFRYLNRVSSSLVV
        LDTIFKYWIFRYLNRVS SLVV
Subjt:  LDTIFKYWIFRYLNRVSSSLVV

TrEMBL top hits

e value

%identity

Alignment

A0A1P8LFN5 Chloroplast envelope membrane protein

3.2e-49

58.11

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Query:  MAEKKALIPLLYFASIVFLP--------------------------------EKSMVKKSYRIKGTLSLGQNA----------------KETIQLIKMHN
        MA+KKA IPLLY ASIVFLP                                EKS++KK   ++    L +                  KETIQLIKMHN
Subjt:  MAEKKALIPLLYFASIVFLP--------------------------------EKSMVKKSYRIKGTLSLGQNA----------------KETIQLIKMHN

Query:  EDCIHTILQFSTNIICFVILSGYSILDNEELVILNSWVQEFLYNLSDTIKAFSILLLTDLY-------------------FRFSCNDQIISGLVSTFPII
        ED IHTIL FSTNIICFVILSGYSIL NEELVILNSWVQEFLYNLSDTIKAFSILLLTDL                    F FS NDQIISGLVSTFP+I
Subjt:  EDCIHTILQFSTNIICFVILSGYSILDNEELVILNSWVQEFLYNLSDTIKAFSILLLTDLY-------------------FRFSCNDQIISGLVSTFPII

Query:  LDTIFKYWIFRYLNRVSSSLVV
        LDTIFKYWIFRYLNRVS SLVV
Subjt:  LDTIFKYWIFRYLNRVSSSLVV

A0A410HFF9 envelope membrane protein, chloroplastic

3.2e-49

58.11

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Query:  MAEKKALIPLLYFASIVFLP--------------------------------EKSMVKKSYRIKGTLSLGQNA----------------KETIQLIKMHN
        MA+KKA IPLLY ASIVFLP                                EKS++KK   ++    L +                  KETIQLIKMHN
Subjt:  MAEKKALIPLLYFASIVFLP--------------------------------EKSMVKKSYRIKGTLSLGQNA----------------KETIQLIKMHN

Query:  EDCIHTILQFSTNIICFVILSGYSILDNEELVILNSWVQEFLYNLSDTIKAFSILLLTDLY-------------------FRFSCNDQIISGLVSTFPII
        ED IHTIL FSTNIICFVILSGYSIL NEELVILNSWVQEFLYNLSDTIKAFSILLLTDL                    F FS NDQIISGLVSTFP+I
Subjt:  EDCIHTILQFSTNIICFVILSGYSILDNEELVILNSWVQEFLYNLSDTIKAFSILLLTDLY-------------------FRFSCNDQIISGLVSTFPII

Query:  LDTIFKYWIFRYLNRVSSSLVV
        LDTIFKYWIFRYLNRVS SLVV
Subjt:  LDTIFKYWIFRYLNRVSSSLVV

A0A6H0ES26 envelope membrane protein, chloroplastic

3.2e-49

58.11

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Query:  MAEKKALIPLLYFASIVFLP--------------------------------EKSMVKKSYRIKGTLSLGQNA----------------KETIQLIKMHN
        MA+KKA IPLLY ASIVFLP                                EKS++KK   ++    L +                  KETIQLIKMHN
Subjt:  MAEKKALIPLLYFASIVFLP--------------------------------EKSMVKKSYRIKGTLSLGQNA----------------KETIQLIKMHN

Query:  EDCIHTILQFSTNIICFVILSGYSILDNEELVILNSWVQEFLYNLSDTIKAFSILLLTDLY-------------------FRFSCNDQIISGLVSTFPII
        ED IHTIL FSTNIICFVILSGYSIL NEELVILNSWVQEFLYNLSDTIKAFSILLLTDL                    F FS NDQIISGLVSTFP+I
Subjt:  EDCIHTILQFSTNIICFVILSGYSILDNEELVILNSWVQEFLYNLSDTIKAFSILLLTDLY-------------------FRFSCNDQIISGLVSTFPII

Query:  LDTIFKYWIFRYLNRVSSSLVV
        LDTIFKYWIFRYLNRVS SLVV
Subjt:  LDTIFKYWIFRYLNRVSSSLVV

A0A6M3RTR6 envelope membrane protein, chloroplastic

3.2e-49

58.11

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Query:  MAEKKALIPLLYFASIVFLP--------------------------------EKSMVKKSYRIKGTLSLGQNA----------------KETIQLIKMHN
        MA+KKA IPLLY ASIVFLP                                EKS++KK   ++    L +                  KETIQLIKMHN
Subjt:  MAEKKALIPLLYFASIVFLP--------------------------------EKSMVKKSYRIKGTLSLGQNA----------------KETIQLIKMHN

Query:  EDCIHTILQFSTNIICFVILSGYSILDNEELVILNSWVQEFLYNLSDTIKAFSILLLTDLY-------------------FRFSCNDQIISGLVSTFPII
        ED IHTIL FSTNIICFVILSGYSIL NEELVILNSWVQEFLYNLSDTIKAFSILLLTDL                    F FS NDQIISGLVSTFP+I
Subjt:  EDCIHTILQFSTNIICFVILSGYSILDNEELVILNSWVQEFLYNLSDTIKAFSILLLTDLY-------------------FRFSCNDQIISGLVSTFPII

Query:  LDTIFKYWIFRYLNRVSSSLVV
        LDTIFKYWIFRYLNRVS SLVV
Subjt:  LDTIFKYWIFRYLNRVSSSLVV

X2F1U1 envelope membrane protein, chloroplastic

3.2e-49

58.11

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Query:  MAEKKALIPLLYFASIVFLP--------------------------------EKSMVKKSYRIKGTLSLGQNA----------------KETIQLIKMHN
        MA+KKA IPLLY ASIVFLP                                EKS++KK   ++    L +                  KETIQLIKMHN
Subjt:  MAEKKALIPLLYFASIVFLP--------------------------------EKSMVKKSYRIKGTLSLGQNA----------------KETIQLIKMHN

Query:  EDCIHTILQFSTNIICFVILSGYSILDNEELVILNSWVQEFLYNLSDTIKAFSILLLTDLY-------------------FRFSCNDQIISGLVSTFPII
        ED IHTIL FSTNIICFVILSGYSIL NEELVILNSWVQEFLYNLSDTIKAFSILLLTDL                    F FS NDQIISGLVSTFP+I
Subjt:  EDCIHTILQFSTNIICFVILSGYSILDNEELVILNSWVQEFLYNLSDTIKAFSILLLTDLY-------------------FRFSCNDQIISGLVSTFPII

Query:  LDTIFKYWIFRYLNRVSSSLVV
        LDTIFKYWIFRYLNRVS SLVV
Subjt:  LDTIFKYWIFRYLNRVSSSLVV

SwissProt top hits

e value

%identity

Alignment

A0ZZ47 Chloroplast envelope membrane protein

2.0e-48

54.5

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Query:  MAEKKALIPLLYFASIVFLP--------------------------------EKSMVKKSYRIKGTLSLGQN----------------AKETIQLIKMHN
        MA+KKA  PLLY ASIVFLP                                EKS++++   ++    L +                  KETIQLIK+HN
Subjt:  MAEKKALIPLLYFASIVFLP--------------------------------EKSMVKKSYRIKGTLSLGQN----------------AKETIQLIKMHN

Query:  EDCIHTILQFSTNIICFVILSGYSILDNEELVILNSWVQEFLYNLSDTIKAFSILLLTDLY-------------------FRFSCNDQIISGLVSTFPII
        ED IHTIL FSTN+ICFVILSGYSIL NEEL+ILNSW QEFLYNLSDTIKAFSILLLTDL                    F F+ NDQIISGLVSTFP+I
Subjt:  EDCIHTILQFSTNIICFVILSGYSILDNEELVILNSWVQEFLYNLSDTIKAFSILLLTDLY-------------------FRFSCNDQIISGLVSTFPII

Query:  LDTIFKYWIFRYLNRVSSSLVV
        LDTIFKYWIFRYLNRVS SLVV
Subjt:  LDTIFKYWIFRYLNRVSSSLVV

B1NWG2 Chloroplast envelope membrane protein

5.2e-49

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Query:  EKKALIPLLYFASIVFLP--------------------------------EKSMVKKSYRIKGTLSLGQNA----------------KETIQLIKMHNED
        +KK  IPLLY  SIVFLP                                EKS+++K   ++  + L +                  KETIQLIKMHNED
Subjt:  EKKALIPLLYFASIVFLP--------------------------------EKSMVKKSYRIKGTLSLGQNA----------------KETIQLIKMHNED

Query:  CIHTILQFSTNIICFVILSGYSILDNEELVILNSWVQEFLYNLSDTIKAFSILLLTDLY-------------------FRFSCNDQIISGLVSTFPIILD
         IHTIL FSTNIICF+ILSGYSIL NEEL+ILNSWVQEFLYNLSDTIKAFSILLLTDL                    F F+ NDQIISGLVSTFP+ILD
Subjt:  CIHTILQFSTNIICFVILSGYSILDNEELVILNSWVQEFLYNLSDTIKAFSILLLTDLY-------------------FRFSCNDQIISGLVSTFPIILD

Query:  TIFKYWIFRYLNRVSSSLVV
        TIFKYWIFRYLNRVS SLVV
Subjt:  TIFKYWIFRYLNRVSSSLVV

Q2L922 Chloroplast envelope membrane protein

6.8e-49

54.95

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Query:  MAEKKALIPLLYFASIVFLP--------------------------------EKSMVKKSYRIKGTLSLGQN----------------AKETIQLIKMHN
        MA+KKA  PLLY ASIVFLP                                EKS++++   ++    L +                  KETIQLIK+HN
Subjt:  MAEKKALIPLLYFASIVFLP--------------------------------EKSMVKKSYRIKGTLSLGQN----------------AKETIQLIKMHN

Query:  EDCIHTILQFSTNIICFVILSGYSILDNEELVILNSWVQEFLYNLSDTIKAFSILLLTDLY-------------------FRFSCNDQIISGLVSTFPII
        ED IHTIL FSTN+ICFVILSGYSIL NEEL+ILNSWVQEFLYNLSDTIKAFSILLLTDL                    F F+ NDQIISGLVSTFP+I
Subjt:  EDCIHTILQFSTNIICFVILSGYSILDNEELVILNSWVQEFLYNLSDTIKAFSILLLTDLY-------------------FRFSCNDQIISGLVSTFPII

Query:  LDTIFKYWIFRYLNRVSSSLVV
        LDTIFKYWIFRYLNRVS SLVV
Subjt:  LDTIFKYWIFRYLNRVSSSLVV

Q2QD77 Chloroplast envelope membrane protein

9.5e-51

57.21

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Query:  MAEKKALIPLLYFASIVFLP--------------------------------EKSMVKKSYRIKGTLSLGQN----------------AKETIQLIKMHN
        M +KKA IPLLY ASIVFLP                                EKS++KK   ++    L +                 +KETIQLIKMHN
Subjt:  MAEKKALIPLLYFASIVFLP--------------------------------EKSMVKKSYRIKGTLSLGQN----------------AKETIQLIKMHN

Query:  EDCIHTILQFSTNIICFVILSGYSILDNEELVILNSWVQEFLYNLSDTIKAFSILLLTDLY-------------------FRFSCNDQIISGLVSTFPII
        ED IHTIL FSTNIICFVILSGYSIL NEELVILNSWVQEFLYNLSDTIKAFSILLLTDL                    F FS NDQIIS LVSTFP+I
Subjt:  EDCIHTILQFSTNIICFVILSGYSILDNEELVILNSWVQEFLYNLSDTIKAFSILLLTDLY-------------------FRFSCNDQIISGLVSTFPII

Query:  LDTIFKYWIFRYLNRVSSSLVV
        LDTIFKYWIFRYLNRVS SLVV
Subjt:  LDTIFKYWIFRYLNRVSSSLVV

Q71E53 Chloroplast envelope membrane protein

1.4e-49

56.31

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Query:  MAEKKALIPLLYFASIVFLP--------------------------------EKSMVKKSYRIKGTLSLGQNAK----------------ETIQLIKMHN
        MA+KKALIPLLY ASIVFLP                                EKS++KK   ++    L +  K                ETIQLIKMHN
Subjt:  MAEKKALIPLLYFASIVFLP--------------------------------EKSMVKKSYRIKGTLSLGQNAK----------------ETIQLIKMHN

Query:  EDCIHTILQFSTNIICFVILSGYSILDNEELVILNSWVQEFLYNLSDTIKAFSILLLTDLY-------------------FRFSCNDQIISGLVSTFPII
        EDCI+TIL FSTNIICFVILS YSIL NEELVILNSWVQEFLYNLSDTIKAFSILLLTDL                    F F+  +QIISGLVSTFP+I
Subjt:  EDCIHTILQFSTNIICFVILSGYSILDNEELVILNSWVQEFLYNLSDTIKAFSILLLTDLY-------------------FRFSCNDQIISGLVSTFPII

Query:  LDTIFKYWIFRYLNRVSSSLVV
        LDTI KYWIFRYLNRVS SLVV
Subjt:  LDTIFKYWIFRYLNRVSSSLVV

Arabidopsis top hits

e value

%identity

Alignment

ATCG00530.1 CemA-like proton extrusion protein-related

2.0e-43

50.45

Show/hide

Query:  MAEKKALIPLLYFASIVFLP--------------------------------EKSMVKKSYRIKGTLSLGQNA----------------KETIQLIKMHN
        MA+KKA IP  YF SIVFLP                                EKS ++K  +++    L +                  KETIQ IK+HN
Subjt:  MAEKKALIPLLYFASIVFLP--------------------------------EKSMVKKSYRIKGTLSLGQNA----------------KETIQLIKMHN

Query:  EDCIHTILQFSTNIICFVILSGYSILDNEELVILNSWVQEFLYNLSDTIKAFSILLLTDLY-------------------FRFSCNDQIISGLVSTFPII
        E  IHTIL FSTN+I FVILSGYS    E+L ILNSWVQEFLYNLSDTIKAFSILLLTDL                    F F+  +QI+SGLVSTFP+I
Subjt:  EDCIHTILQFSTNIICFVILSGYSILDNEELVILNSWVQEFLYNLSDTIKAFSILLLTDLY-------------------FRFSCNDQIISGLVSTFPII

Query:  LDTIFKYWIFRYLNRVSSSLVV
        LDTIFKYWIFRYLNRVS SLVV
Subjt:  LDTIFKYWIFRYLNRVSSSLVV

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGCAGAAAAGAAAGCATTGATTCCCCTTCTATATTTTGCATCTATAGTATTTTTACCTGAAAAAAGTATGGTAAAAAAAAGTTATAGAATTAAAGGAACTCTTTCTCT
TGGACAAAATGCTAAAGAAACGATCCAATTGATCAAGATGCATAATGAGGATTGTATCCATACGATTTTGCAATTCTCAACAAATATAATCTGTTTCGTTATTCTAAGTG
GTTATTCTATTCTTGATAATGAAGAACTTGTTATTCTTAACTCTTGGGTTCAAGAGTTCCTATATAACTTAAGCGACACAATAAAAGCTTTTTCTATTCTTTTATTAACT
GATTTATATTTTAGATTTTCTTGTAACGATCAAATTATATCTGGTCTTGTTTCCACTTTTCCAATTATTCTTGACACAATTTTTAAATATTGGATCTTCCGTTATTTAAA
TCGTGTATCTTCGTCACTTGTTGTTGCGTAA

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MAEKKALIPLLYFASIVFLPEKSMVKKSYRIKGTLSLGQNAKETIQLIKMHNEDCIHTILQFSTNIICFVILSGYSILDNEELVILNSWVQEFLYNLSDTIKAFSILLLT
DLYFRFSCNDQIISGLVSTFPIILDTIFKYWIFRYLNRVSSSLVVA

Tan0016756 (gene) of Snake gourd v1 genome