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Tan0016760 (gene) of Snake gourd v1 genome

Gene IDTan0016760
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionB3 domain-containing protein
Genome locationLG03:61640360..61641397
RNA-Seq ExpressionTan0016760
SyntenyTan0016760
Gene Ontology termsGO:0003677 - DNA binding (molecular function)
InterPro domainsIPR005508 - B3 domain-containing protein At2g31720-like
IPR015300 - DNA-binding pseudobarrel domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0060117.1 B3 domain-containing protein [Cucumis melo var. makuwa]3.2e-1034.84Show/hide
Query:  ETEPEIFQNLPPEFPSRFAKLIEDPASIRPRILMEKRLNSANIDESRNRLPISPKTMKEVFLLPEEEAELESGKEIEVTVIEPDGVTVSRLTL-RLRTRR
        E+E E  +N+P E+  +    +     + P ++MEKRL   +++E RNRL I  +  +  FL  EEE +L +     V +IEPD  TVS +TL +  TR+
Subjt:  ETEPEIFQNLPPEFPSRFAKLIEDPASIRPRILMEKRLNSANIDESRNRLPISPKTMKEVFLLPEEEAELESGKEIEVTVIEPDGVTVSRLTL-RLRTRR

Query:  -PTYVLTKTWKDVVARNSDALKKGEFVRVWYFRVNGGE---LWFAIDVEDGKHDR
           YVL   W  +V RN   LK+G+ +++W FR  GG     +  ++VE+ +  R
Subjt:  -PTYVLTKTWKDVVARNSDALKKGEFVRVWYFRVNGGE---LWFAIDVEDGKHDR

OMP12626.1 hypothetical protein COLO4_02946 [Corchorus olitorius]7.9e-0933.33Show/hide
Query:  PPEFPSRFAKLIEDPASIRPRILMEKRLNSANIDESRNRLPISPKTMKEVFLLPEEEAELE--SGKEIEVTVIEPDGVTVSRL---TLRLRTRRPTYVLT
        PP+ P  F   IE+       ++++K +   ++ + +NRL ++ K ++  FL  EEEA L       I+VT IEP  + VS L   T  L T +P+++  
Subjt:  PPEFPSRFAKLIEDPASIRPRILMEKRLNSANIDESRNRLPISPKTMKEVFLLPEEEAELE--SGKEIEVTVIEPDGVTVSRL---TLRLRTRRPTYVLT

Query:  KTWKDVVARNSDALKKGEFVRVWYFR-VNGGELWFA-IDVEDGKHDREIVKHVCEEPCG
        K W  +   NSD+LK    V+VW FR     +L FA I V+DG+       H+ +E  G
Subjt:  KTWKDVVARNSDALKKGEFVRVWYFR-VNGGELWFA-IDVEDGKHDREIVKHVCEEPCG

XP_022156187.1 VID27-like protein [Momordica charantia]1.5e-3944.8Show/hide
Query:  TEKEIEEQKDNIQSSSHNETEKSEEISLGEGEIDESLQQEPEEEEEVDIITVSDEETALAEGGRAERSLEIEKQESSSSE-------------DQESSES
        T    E     ++   ++E +  EE   G+G+ D     E +E+EEVDI+TV  E T  A     E+ + +E+   S S              DQ+SSES
Subjt:  TEKEIEEQKDNIQSSSHNETEKSEEISLGEGEIDESLQQEPEEEEEVDIITVSDEETALAEGGRAERSLEIEKQESSSSE-------------DQESSES

Query:  DGSDEETEPEIFQNLPPEFPSRFAKLIEDPASIRPRILMEKRLNSANIDESRNRLPISPKTMKEVFLLPEEEAELESGKEIEVTVIEPDGVTVSRLTLRL
        DG + ETE +I  N PP FP  F K + DP SIRPRILMEK+L  +++DE+RNRL I  K +KE FLL +EE  + +G+++EV VIEPD  TVS +TLR 
Subjt:  DGSDEETEPEIFQNLPPEFPSRFAKLIEDPASIRPRILMEKRLNSANIDESRNRLPISPKTMKEVFLLPEEEAELESGKEIEVTVIEPDGVTVSRLTLRL

Query:  R----TRRPTYVLTKTWKDVVARNSDALKKGEFVRVWYFRVNGGE----LWFAIDV-EDGK-HDREIVKHVCEEPCGQN
        R     + P+YVLT  W  VVARNSDALK+G  VRVWYF    G+    L FAI+V E GK  D E VK + ++  GQN
Subjt:  R----TRRPTYVLTKTWKDVVARNSDALKKGEFVRVWYFRVNGGE----LWFAIDV-EDGK-HDREIVKHVCEEPCGQN

XP_022950597.1 B3 domain-containing protein At2g31420-like [Cucurbita moschata]6.7e-0838.52Show/hide
Query:  PRILMEKRLNSANIDESRNRLPISPKTMKEVFLLPEEEAELESGKEIEVTVIEPDGVTVSRLTLRLRTRRPT---YVLTKTWKDVVARNSDALKKGEFVR
        P  L++KRL   ++DE RNRL I  + M+  FL  EEE +L   +   V VIEPD  +VS +TL  +   P+   YV    W  +V RN   LK+G+ V+
Subjt:  PRILMEKRLNSANIDESRNRLPISPKTMKEVFLLPEEEAELESGKEIEVTVIEPDGVTVSRLTLRLRTRRPT---YVLTKTWKDVVARNSDALKKGEFVR

Query:  VWYFRVNGGELWFAIDVEDGKHDR--EIVKHVCEE
        +W FRV+GG         D  H R   ++  +CEE
Subjt:  VWYFRVNGGELWFAIDVEDGKHDR--EIVKHVCEE

XP_022978264.1 uncharacterized protein LOC111478299 [Cucurbita maxima]1.1e-0740.91Show/hide
Query:  PRILMEKRLNSANIDESRNRLPISPKTMKEVFLLPEEEAELESGKEIEVTVIEPDGVTVSRLTLRLRTRRPT---YVLTKTWKDVVARNSDALKKGEFVR
        P  L++KRL   ++DE RNRL I  + M+  FL  EEE +L   +   V VIEPD  +VS +TL  +   P+   YV    W  +V RN   LK+G+ ++
Subjt:  PRILMEKRLNSANIDESRNRLPISPKTMKEVFLLPEEEAELESGKEIEVTVIEPDGVTVSRLTLRLRTRRPT---YVLTKTWKDVVARNSDALKKGEFVR

Query:  VWYFRVNGGE
        +W FRV+GG+
Subjt:  VWYFRVNGGE

TrEMBL top hitse value%identityAlignment
A0A5A7UZP8 B3 domain-containing protein1.6e-1034.84Show/hide
Query:  ETEPEIFQNLPPEFPSRFAKLIEDPASIRPRILMEKRLNSANIDESRNRLPISPKTMKEVFLLPEEEAELESGKEIEVTVIEPDGVTVSRLTL-RLRTRR
        E+E E  +N+P E+  +    +     + P ++MEKRL   +++E RNRL I  +  +  FL  EEE +L +     V +IEPD  TVS +TL +  TR+
Subjt:  ETEPEIFQNLPPEFPSRFAKLIEDPASIRPRILMEKRLNSANIDESRNRLPISPKTMKEVFLLPEEEAELESGKEIEVTVIEPDGVTVSRLTL-RLRTRR

Query:  -PTYVLTKTWKDVVARNSDALKKGEFVRVWYFRVNGGE---LWFAIDVEDGKHDR
           YVL   W  +V RN   LK+G+ +++W FR  GG     +  ++VE+ +  R
Subjt:  -PTYVLTKTWKDVVARNSDALKKGEFVRVWYFRVNGGE---LWFAIDVEDGKHDR

A0A6J1DRC9 VID27-like protein7.1e-4044.8Show/hide
Query:  TEKEIEEQKDNIQSSSHNETEKSEEISLGEGEIDESLQQEPEEEEEVDIITVSDEETALAEGGRAERSLEIEKQESSSSE-------------DQESSES
        T    E     ++   ++E +  EE   G+G+ D     E +E+EEVDI+TV  E T  A     E+ + +E+   S S              DQ+SSES
Subjt:  TEKEIEEQKDNIQSSSHNETEKSEEISLGEGEIDESLQQEPEEEEEVDIITVSDEETALAEGGRAERSLEIEKQESSSSE-------------DQESSES

Query:  DGSDEETEPEIFQNLPPEFPSRFAKLIEDPASIRPRILMEKRLNSANIDESRNRLPISPKTMKEVFLLPEEEAELESGKEIEVTVIEPDGVTVSRLTLRL
        DG + ETE +I  N PP FP  F K + DP SIRPRILMEK+L  +++DE+RNRL I  K +KE FLL +EE  + +G+++EV VIEPD  TVS +TLR 
Subjt:  DGSDEETEPEIFQNLPPEFPSRFAKLIEDPASIRPRILMEKRLNSANIDESRNRLPISPKTMKEVFLLPEEEAELESGKEIEVTVIEPDGVTVSRLTLRL

Query:  R----TRRPTYVLTKTWKDVVARNSDALKKGEFVRVWYFRVNGGE----LWFAIDV-EDGK-HDREIVKHVCEEPCGQN
        R     + P+YVLT  W  VVARNSDALK+G  VRVWYF    G+    L FAI+V E GK  D E VK + ++  GQN
Subjt:  R----TRRPTYVLTKTWKDVVARNSDALKKGEFVRVWYFRVNGGE----LWFAIDV-EDGK-HDREIVKHVCEEPCGQN

A0A6J1DSR8 B3 domain-containing protein At1g05920-like6.7e-0629.15Show/hide
Query:  KEIEEQKDNIQSSSHNETEKSEEISLGEGEIDESLQQEPEEEEE----VDIITVSDEETALAEGGRAER------------------------SLEIEKQ
        +E+ E+    QS  +   +  +EI L  GE+DE+ +++   EEE    +D+    +E   L +  + +R                        S E++  
Subjt:  KEIEEQKDNIQSSSHNETEKSEEISLGEGEIDESLQQEPEEEEE----VDIITVSDEETALAEGGRAER------------------------SLEIEKQ

Query:  ESSSSEDQESSESDGSDEE-TEPE---IFQNLPPEFPSRFAKLIEDPASIR------------PRILMEKRLNSANIDESRNRLPISPKTMKEVFLLPEE
        E++    +  SES+G  E  T+ E   I + +P     R A   + P  I+            P  +M K+L  A++DE  NRL I  + ++E F+  EE
Subjt:  ESSSSEDQESSESDGSDEE-TEPE---IFQNLPPEFPSRFAKLIEDPASIR------------PRILMEKRLNSANIDESRNRLPISPKTMKEVFLLPEE

Query:  EAELESGKEIEVTVIEPDGVTVSRLTL-RLRTRR-PTYVLTKTWKDVVARNSDALKKGEFVRVWYFRVNGG
        E +L   K + V +IEPD  +VS +TL +  TR+ P YV+   W  +V RN   LK+G+ V +W FR  GG
Subjt:  EAELESGKEIEVTVIEPDGVTVSRLTL-RLRTRR-PTYVLTKTWKDVVARNSDALKKGEFVRVWYFRVNGG

A0A6J1GF95 B3 domain-containing protein At2g31420-like3.2e-0838.52Show/hide
Query:  PRILMEKRLNSANIDESRNRLPISPKTMKEVFLLPEEEAELESGKEIEVTVIEPDGVTVSRLTLRLRTRRPT---YVLTKTWKDVVARNSDALKKGEFVR
        P  L++KRL   ++DE RNRL I  + M+  FL  EEE +L   +   V VIEPD  +VS +TL  +   P+   YV    W  +V RN   LK+G+ V+
Subjt:  PRILMEKRLNSANIDESRNRLPISPKTMKEVFLLPEEEAELESGKEIEVTVIEPDGVTVSRLTLRLRTRRPT---YVLTKTWKDVVARNSDALKKGEFVR

Query:  VWYFRVNGGELWFAIDVEDGKHDR--EIVKHVCEE
        +W FRV+GG         D  H R   ++  +CEE
Subjt:  VWYFRVNGGELWFAIDVEDGKHDR--EIVKHVCEE

A0A6J1ITM1 uncharacterized protein LOC1114782995.5e-0840.91Show/hide
Query:  PRILMEKRLNSANIDESRNRLPISPKTMKEVFLLPEEEAELESGKEIEVTVIEPDGVTVSRLTLRLRTRRPT---YVLTKTWKDVVARNSDALKKGEFVR
        P  L++KRL   ++DE RNRL I  + M+  FL  EEE +L   +   V VIEPD  +VS +TL  +   P+   YV    W  +V RN   LK+G+ ++
Subjt:  PRILMEKRLNSANIDESRNRLPISPKTMKEVFLLPEEEAELESGKEIEVTVIEPDGVTVSRLTLRLRTRRPT---YVLTKTWKDVVARNSDALKKGEFVR

Query:  VWYFRVNGGE
        +W FRV+GG+
Subjt:  VWYFRVNGGE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGATTGACGTTAGCGCTTCCGGCTCTGCATCTGCCGCCGGGGAATCAACCGGAGACGGCGGCGGCGGCGGCGACGCCAACTTCGTTCTATCTCTGCACAAGAAACT
GAAAGTCGTCTCGATGAATGAATCAACAACTGCACTTACAGAAAAGGAGATCGAAGAACAAAAAGACAACATCCAATCTTCTTCGCACAATGAGACCGAAAAAAGCGAAG
AAATTAGTCTCGGAGAGGGCGAAATCGATGAATCGTTACAACAAGAACCCGAGGAGGAGGAGGAGGTGGACATCATCACCGTAAGCGATGAAGAAACGGCGTTGGCGGAA
GGAGGAAGAGCGGAGAGATCGCTGGAGATCGAAAAACAAGAATCCTCTTCCTCCGAAGATCAAGAATCTTCCGAATCGGACGGCAGCGACGAAGAAACAGAGCCTGAAAT
CTTCCAAAACCTTCCGCCGGAGTTCCCCTCACGATTCGCGAAACTAATCGAAGATCCGGCGTCGATTCGTCCTCGGATTTTGATGGAGAAGAGATTGAACAGCGCGAACA
TCGACGAGAGTCGGAATCGATTGCCGATTTCGCCGAAGACGATGAAGGAGGTGTTCTTGCTGCCAGAGGAAGAGGCAGAGTTGGAATCCGGCAAGGAAATAGAGGTGACG
GTGATCGAGCCGGACGGCGTAACGGTGAGTAGGTTGACGTTGCGACTGCGAACGCGGCGGCCAACGTACGTGCTGACAAAGACGTGGAAGGATGTGGTGGCGCGTAACAG
TGACGCGCTGAAGAAGGGAGAATTTGTTAGGGTTTGGTATTTTCGTGTCAATGGCGGCGAGCTCTGGTTTGCGATTGACGTTGAAGACGGAAAGCATGATCGTGAAATTG
TGAAGCACGTCTGTGAAGAACCGTGTGGCCAAAATGCTTTGCCTCGTAATAATTTCTTTCACTTCTTCAATTGA
mRNA sequenceShow/hide mRNA sequence
CTGATCTCTCTATATAAATGCAGAGCTCCACTGTAAGTCTCACAATTATTCAATAAACAAATTTGAAATTTCCACTCAAACTTCATGGCGATTGACGTTAGCGCTTCCGG
CTCTGCATCTGCCGCCGGGGAATCAACCGGAGACGGCGGCGGCGGCGGCGACGCCAACTTCGTTCTATCTCTGCACAAGAAACTGAAAGTCGTCTCGATGAATGAATCAA
CAACTGCACTTACAGAAAAGGAGATCGAAGAACAAAAAGACAACATCCAATCTTCTTCGCACAATGAGACCGAAAAAAGCGAAGAAATTAGTCTCGGAGAGGGCGAAATC
GATGAATCGTTACAACAAGAACCCGAGGAGGAGGAGGAGGTGGACATCATCACCGTAAGCGATGAAGAAACGGCGTTGGCGGAAGGAGGAAGAGCGGAGAGATCGCTGGA
GATCGAAAAACAAGAATCCTCTTCCTCCGAAGATCAAGAATCTTCCGAATCGGACGGCAGCGACGAAGAAACAGAGCCTGAAATCTTCCAAAACCTTCCGCCGGAGTTCC
CCTCACGATTCGCGAAACTAATCGAAGATCCGGCGTCGATTCGTCCTCGGATTTTGATGGAGAAGAGATTGAACAGCGCGAACATCGACGAGAGTCGGAATCGATTGCCG
ATTTCGCCGAAGACGATGAAGGAGGTGTTCTTGCTGCCAGAGGAAGAGGCAGAGTTGGAATCCGGCAAGGAAATAGAGGTGACGGTGATCGAGCCGGACGGCGTAACGGT
GAGTAGGTTGACGTTGCGACTGCGAACGCGGCGGCCAACGTACGTGCTGACAAAGACGTGGAAGGATGTGGTGGCGCGTAACAGTGACGCGCTGAAGAAGGGAGAATTTG
TTAGGGTTTGGTATTTTCGTGTCAATGGCGGCGAGCTCTGGTTTGCGATTGACGTTGAAGACGGAAAGCATGATCGTGAAATTGTGAAGCACGTCTGTGAAGAACCGTGT
GGCCAAAATGCTTTGCCTCGTAATAATTTCTTTCACTTCTTCAATTGA
Protein sequenceShow/hide protein sequence
MAIDVSASGSASAAGESTGDGGGGGDANFVLSLHKKLKVVSMNESTTALTEKEIEEQKDNIQSSSHNETEKSEEISLGEGEIDESLQQEPEEEEEVDIITVSDEETALAE
GGRAERSLEIEKQESSSSEDQESSESDGSDEETEPEIFQNLPPEFPSRFAKLIEDPASIRPRILMEKRLNSANIDESRNRLPISPKTMKEVFLLPEEEAELESGKEIEVT
VIEPDGVTVSRLTLRLRTRRPTYVLTKTWKDVVARNSDALKKGEFVRVWYFRVNGGELWFAIDVEDGKHDREIVKHVCEEPCGQNALPRNNFFHFFN