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Tan0016774 (gene) of Snake gourd v1 genome

Gene IDTan0016774
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionF-box domain-containing protein
Genome locationLG07:74412224..74414572
RNA-Seq ExpressionTan0016774
SyntenyTan0016774
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7011228.1 hypothetical protein SDJN02_26131 [Cucurbita argyrosperma subsp. argyrosperma]5.1e-7181.76Show/hide
Query:  MGAVSLLPLFLATSLRPYNFPSTQTLLSNFVASSRVASFTPKCTKFRRKSVVFGKQSGNANESQFLDENGVVDDMDGYLNYLSLEYDSVWDTKPSWCQPW
        MG VS   LFLATSLR ++FPSTQTLLSNF ASS+  SFTPKCT+FRRKSVVFGKQS N +ESQFLDENG V+DMDGYLNY S EYDSVWDTKPSWCQPW
Subjt:  MGAVSLLPLFLATSLRPYNFPSTQTLLSNFVASSRVASFTPKCTKFRRKSVVFGKQSGNANESQFLDENGVVDDMDGYLNYLSLEYDSVWDTKPSWCQPW

Query:  TIMLTGFLVIASSWFIIKSIAVTAVIFLLICLWWYIFLYSYPKAYSDMIAERRKKVTDGVEDTFGVERTQ
        TI LTG LVIASSW +IKSIAVTAV+  LIC WWYIFLYSYPKAY+DMIAERR+KV+DGVEDTFGV+RTQ
Subjt:  TIMLTGFLVIASSWFIIKSIAVTAVIFLLICLWWYIFLYSYPKAYSDMIAERRKKVTDGVEDTFGVERTQ

XP_022145927.1 uncharacterized protein LOC111015275 [Momordica charantia]8.4e-7483.72Show/hide
Query:  MGAVSLLPLFLATSLRPYNFP--STQTLLSNFVASSRVASFTPKCTKFRRKSVVFGKQSGNANESQFLDENGVVDDMDGYLNYLSLEYDSVWDTKPSWCQ
        MGA+SL+PLFLATSLR ++FP  STQTLL+NFVA+S+V S TP+CTKFRRK+VVFGKQS NANESQFLDENGVVDDMDGYLNYLSLEYDSVWDTKPSWCQ
Subjt:  MGAVSLLPLFLATSLRPYNFP--STQTLLSNFVASSRVASFTPKCTKFRRKSVVFGKQSGNANESQFLDENGVVDDMDGYLNYLSLEYDSVWDTKPSWCQ

Query:  PWTIMLTGFLVIASSWFIIKSIAVTAVIFLLICLWWYIFLYSYPKAYSDMIAERRKKVTDGVEDTFGVERTQ
        PWTI LTG L+ ASSWF+IKSIAVTAVI  +I LWWYIFLYSYPKAYS+MIAERRKKVTDG EDTFGV +TQ
Subjt:  PWTIMLTGFLVIASSWFIIKSIAVTAVIFLLICLWWYIFLYSYPKAYSDMIAERRKKVTDGVEDTFGVERTQ

XP_022963485.1 uncharacterized protein LOC111463803 [Cucurbita moschata]6.6e-7181.18Show/hide
Query:  MGAVSLLPLFLATSLRPYNFPSTQTLLSNFVASSRVASFTPKCTKFRRKSVVFGKQSGNANESQFLDENGVVDDMDGYLNYLSLEYDSVWDTKPSWCQPW
        MG VS   LFLATSLR ++FPSTQTLLSNF ASS+  SFTPKCT+FRRKSVVFGKQS N +ESQFLDENG V+DMDGYLNY S EYDSVWDTKPSWCQPW
Subjt:  MGAVSLLPLFLATSLRPYNFPSTQTLLSNFVASSRVASFTPKCTKFRRKSVVFGKQSGNANESQFLDENGVVDDMDGYLNYLSLEYDSVWDTKPSWCQPW

Query:  TIMLTGFLVIASSWFIIKSIAVTAVIFLLICLWWYIFLYSYPKAYSDMIAERRKKVTDGVEDTFGVERTQ
        T+ LTG LVIASSW +IKSIAVTAV+  LIC WWYIFLYSYPKAY+DMIAERR+KV+DGVEDTFGV+RTQ
Subjt:  TIMLTGFLVIASSWFIIKSIAVTAVIFLLICLWWYIFLYSYPKAYSDMIAERRKKVTDGVEDTFGVERTQ

XP_022967429.1 uncharacterized protein LOC111466970 [Cucurbita maxima]6.0e-7282.94Show/hide
Query:  MGAVSLLPLFLATSLRPYNFPSTQTLLSNFVASSRVASFTPKCTKFRRKSVVFGKQSGNANESQFLDENGVVDDMDGYLNYLSLEYDSVWDTKPSWCQPW
        MG VS   LFLATSLR ++FPSTQTLLSNF ASS+V SFTPKCT+FRRKSVVFGKQS N +ESQFLDENG V+DMDGYLNY S EYDSVWDTKPSWCQPW
Subjt:  MGAVSLLPLFLATSLRPYNFPSTQTLLSNFVASSRVASFTPKCTKFRRKSVVFGKQSGNANESQFLDENGVVDDMDGYLNYLSLEYDSVWDTKPSWCQPW

Query:  TIMLTGFLVIASSWFIIKSIAVTAVIFLLICLWWYIFLYSYPKAYSDMIAERRKKVTDGVEDTFGVERTQ
        TI LTG LVIASSW +IKSIAVTAV+  LIC WWYIFLYSYPKAYSDMIAERR+KV+DGVEDTFGV+RTQ
Subjt:  TIMLTGFLVIASSWFIIKSIAVTAVIFLLICLWWYIFLYSYPKAYSDMIAERRKKVTDGVEDTFGVERTQ

XP_023553740.1 uncharacterized protein LOC111811218 [Cucurbita pepo subsp. pepo]1.0e-7182.35Show/hide
Query:  MGAVSLLPLFLATSLRPYNFPSTQTLLSNFVASSRVASFTPKCTKFRRKSVVFGKQSGNANESQFLDENGVVDDMDGYLNYLSLEYDSVWDTKPSWCQPW
        MG VS   LFLATSLR ++FPSTQTLLSNF ASS+V SFTPKCT+FRRKSVVFGKQS N +ESQFLDENG V+DMDGYLNY S EYDSVWDTKPSWCQPW
Subjt:  MGAVSLLPLFLATSLRPYNFPSTQTLLSNFVASSRVASFTPKCTKFRRKSVVFGKQSGNANESQFLDENGVVDDMDGYLNYLSLEYDSVWDTKPSWCQPW

Query:  TIMLTGFLVIASSWFIIKSIAVTAVIFLLICLWWYIFLYSYPKAYSDMIAERRKKVTDGVEDTFGVERTQ
        TI LTG LVIASSW +IKSIAVTAV+  LIC WWYIFLYSYPKAY+DMIAERR+KV+DGVEDTFGV+RTQ
Subjt:  TIMLTGFLVIASSWFIIKSIAVTAVIFLLICLWWYIFLYSYPKAYSDMIAERRKKVTDGVEDTFGVERTQ

TrEMBL top hitse value%identityAlignment
A0A0A0KED9 Uncharacterized protein6.1e-7081.29Show/hide
Query:  MGAVSLLPLFLATSLRPYNFP-STQTLLSNFVASSRVASFTPKCTKFRRKSVVFGKQSGNANESQFLDENGVVDDMDGYLNYLSLEYDSVWDTKPSWCQP
        MGAVS    FLA+SLRPY FP STQTLLSNF ASS++ SFTP CTKFR K++VFGKQSGN N+SQFLDENGVV+DMDGYLNY S EYDSVWDTKP+WCQP
Subjt:  MGAVSLLPLFLATSLRPYNFP-STQTLLSNFVASSRVASFTPKCTKFRRKSVVFGKQSGNANESQFLDENGVVDDMDGYLNYLSLEYDSVWDTKPSWCQP

Query:  WTIMLTGFLVIASSWFIIKSIAVTAVIFLLICLWWYIFLYSYPKAYSDMIAERRKKVTDGVEDTFGVERTQ
        WTI LTG LVIASSW  IKSIAVTAVI  LICLWWYIFLYSYPKAYS+MIAERR+KV+DG+EDTFGV+RTQ
Subjt:  WTIMLTGFLVIASSWFIIKSIAVTAVIFLLICLWWYIFLYSYPKAYSDMIAERRKKVTDGVEDTFGVERTQ

A0A1S3BLE6 uncharacterized protein LOC103491324 isoform X12.5e-6880.7Show/hide
Query:  MGAVSLLPLFLATSLRPYNFP-STQTLLSNFVASSRVASFTPKCTKFRRKSVVFGKQSGNANESQFLDENGVVDDMDGYLNYLSLEYDSVWDTKPSWCQP
        MGA+SLL   LATSL  Y+FP STQTLLSNF ASS++ SFTPKCTKFR K++VFGKQS   N+SQFLDENGVVDDMDGYLNY S EYDSVWDTKPSWCQP
Subjt:  MGAVSLLPLFLATSLRPYNFP-STQTLLSNFVASSRVASFTPKCTKFRRKSVVFGKQSGNANESQFLDENGVVDDMDGYLNYLSLEYDSVWDTKPSWCQP

Query:  WTIMLTGFLVIASSWFIIKSIAVTAVIFLLICLWWYIFLYSYPKAYSDMIAERRKKVTDGVEDTFGVERTQ
        WTI LTG LVIASSW  IKS+AVTAVI  LICLWWYIFLYSYPKAYS+MIAERR+KV+DG+EDTFGV+RTQ
Subjt:  WTIMLTGFLVIASSWFIIKSIAVTAVIFLLICLWWYIFLYSYPKAYSDMIAERRKKVTDGVEDTFGVERTQ

A0A6J1CY32 uncharacterized protein LOC1110152754.1e-7483.72Show/hide
Query:  MGAVSLLPLFLATSLRPYNFP--STQTLLSNFVASSRVASFTPKCTKFRRKSVVFGKQSGNANESQFLDENGVVDDMDGYLNYLSLEYDSVWDTKPSWCQ
        MGA+SL+PLFLATSLR ++FP  STQTLL+NFVA+S+V S TP+CTKFRRK+VVFGKQS NANESQFLDENGVVDDMDGYLNYLSLEYDSVWDTKPSWCQ
Subjt:  MGAVSLLPLFLATSLRPYNFP--STQTLLSNFVASSRVASFTPKCTKFRRKSVVFGKQSGNANESQFLDENGVVDDMDGYLNYLSLEYDSVWDTKPSWCQ

Query:  PWTIMLTGFLVIASSWFIIKSIAVTAVIFLLICLWWYIFLYSYPKAYSDMIAERRKKVTDGVEDTFGVERTQ
        PWTI LTG L+ ASSWF+IKSIAVTAVI  +I LWWYIFLYSYPKAYS+MIAERRKKVTDG EDTFGV +TQ
Subjt:  PWTIMLTGFLVIASSWFIIKSIAVTAVIFLLICLWWYIFLYSYPKAYSDMIAERRKKVTDGVEDTFGVERTQ

A0A6J1HI50 uncharacterized protein LOC1114638033.2e-7181.18Show/hide
Query:  MGAVSLLPLFLATSLRPYNFPSTQTLLSNFVASSRVASFTPKCTKFRRKSVVFGKQSGNANESQFLDENGVVDDMDGYLNYLSLEYDSVWDTKPSWCQPW
        MG VS   LFLATSLR ++FPSTQTLLSNF ASS+  SFTPKCT+FRRKSVVFGKQS N +ESQFLDENG V+DMDGYLNY S EYDSVWDTKPSWCQPW
Subjt:  MGAVSLLPLFLATSLRPYNFPSTQTLLSNFVASSRVASFTPKCTKFRRKSVVFGKQSGNANESQFLDENGVVDDMDGYLNYLSLEYDSVWDTKPSWCQPW

Query:  TIMLTGFLVIASSWFIIKSIAVTAVIFLLICLWWYIFLYSYPKAYSDMIAERRKKVTDGVEDTFGVERTQ
        T+ LTG LVIASSW +IKSIAVTAV+  LIC WWYIFLYSYPKAY+DMIAERR+KV+DGVEDTFGV+RTQ
Subjt:  TIMLTGFLVIASSWFIIKSIAVTAVIFLLICLWWYIFLYSYPKAYSDMIAERRKKVTDGVEDTFGVERTQ

A0A6J1HWP2 uncharacterized protein LOC1114669702.9e-7282.94Show/hide
Query:  MGAVSLLPLFLATSLRPYNFPSTQTLLSNFVASSRVASFTPKCTKFRRKSVVFGKQSGNANESQFLDENGVVDDMDGYLNYLSLEYDSVWDTKPSWCQPW
        MG VS   LFLATSLR ++FPSTQTLLSNF ASS+V SFTPKCT+FRRKSVVFGKQS N +ESQFLDENG V+DMDGYLNY S EYDSVWDTKPSWCQPW
Subjt:  MGAVSLLPLFLATSLRPYNFPSTQTLLSNFVASSRVASFTPKCTKFRRKSVVFGKQSGNANESQFLDENGVVDDMDGYLNYLSLEYDSVWDTKPSWCQPW

Query:  TIMLTGFLVIASSWFIIKSIAVTAVIFLLICLWWYIFLYSYPKAYSDMIAERRKKVTDGVEDTFGVERTQ
        TI LTG LVIASSW +IKSIAVTAV+  LIC WWYIFLYSYPKAYSDMIAERR+KV+DGVEDTFGV+RTQ
Subjt:  TIMLTGFLVIASSWFIIKSIAVTAVIFLLICLWWYIFLYSYPKAYSDMIAERRKKVTDGVEDTFGVERTQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G02725.1 unknown protein2.4e-4255.19Show/hide
Query:  ATSLRPYNFPSTQTLLSNFVASSRVASFTPKCTKFRRKSVVFGKQSGNANESQFLDENGVVDDMDGYLNYLSLEYDSVWDTKPSWCQPWTIMLTGFLVIA
        A SL P+  P T+ LLS     + + SF  K  +   K   FG       +S+F+DE GVVDDM+G+L+ LSLEYDSVWDTKPSWCQPWTIMLTG  ++A
Subjt:  ATSLRPYNFPSTQTLLSNFVASSRVASFTPKCTKFRRKSVVFGKQSGNANESQFLDENGVVDDMDGYLNYLSLEYDSVWDTKPSWCQPWTIMLTGFLVIA

Query:  SSWFIIKSIAVTAVIFLLICLWWYIFLYSYPKAYSDMIAERRKKVTDGVEDTFG
         SW I+ S+ V+++   +I  WWYIFLYSYPK+YS+MIAERRK+V DG ED +G
Subjt:  SSWFIIKSIAVTAVIFLLICLWWYIFLYSYPKAYSDMIAERRKKVTDGVEDTFG

AT4G02725.2 unknown protein1.7e-3253.03Show/hide
Query:  ATSLRPYNFPSTQTLLSNFVASSRVASFTPKCTKFRRKSVVFGKQSGNANESQFLDENGVVDDMDGYLNYLSLEYDSVWDTKPSWCQPWTIMLTGFLVIA
        A SL P+  P T+ LLS     + + SF  K  +   K   FG       +S+F+DE GVVDDM+G+L+ LSLEYDSVWDTKPSWCQPWTIMLTG  ++A
Subjt:  ATSLRPYNFPSTQTLLSNFVASSRVASFTPKCTKFRRKSVVFGKQSGNANESQFLDENGVVDDMDGYLNYLSLEYDSVWDTKPSWCQPWTIMLTGFLVIA

Query:  SSWFIIKSIAVTAVIFLLICLWWYIFLYSYPK
         SW I+ S+ V+++   +I  WWYIFLYSYPK
Subjt:  SSWFIIKSIAVTAVIFLLICLWWYIFLYSYPK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAGCTGTTTCTCTACTCCCTCTCTTCCTTGCCACTTCTCTACGTCCATACAATTTTCCTTCAACACAAACCCTTCTTTCTAATTTCGTAGCTTCGTCAAGAGTCGC
TTCCTTTACTCCCAAATGCACAAAATTCCGCAGGAAAAGTGTCGTGTTTGGGAAGCAATCTGGCAACGCAAATGAATCTCAGTTTTTAGATGAAAATGGGGTCGTCGATG
ATATGGATGGGTACTTGAATTACCTCTCTCTCGAATATGACTCCGTTTGGGATACAAAGCCTTCATGGTGCCAACCGTGGACTATAATGCTGACAGGATTCCTAGTGATT
GCCTCTAGCTGGTTTATTATAAAGTCGATAGCAGTGACCGCAGTAATATTCTTATTAATATGCTTATGGTGGTACATCTTTCTTTACTCATATCCAAAGGCTTATTCTGA
CATGATTGCGGAGCGAAGAAAAAAGGTTACTGATGGAGTAGAAGACACATTTGGTGTGGAGAGGACACAGTGA
mRNA sequenceShow/hide mRNA sequence
CAATAATTGAAATATAGACATTTTAATATCCCTCCCATCACCTTACTTACTGTAATATATATTTATAAAAAAAAAAAAAAAAACTTTCAGTAATTCGTAAAGTGACTAAA
GGATGCTAGTTTTGTAAGAAATTTGTTAGCTATGGCTCAGTGGCTGCATCGTATTTCGTGGGCCATGATTTTCTATCCTTTGTGTTAGCTAACTGGAATTCCCCAACTTC
GGCAGCTCAGCTCCATGGCTCCACTCCATATTAGCAGACTACTTGAAACTTGGAAGGGAAGTTGAAAAAGAAACCACAAATCCATGGGAGCTGTTTCTCTACTCCCTCTC
TTCCTTGCCACTTCTCTACGTCCATACAATTTTCCTTCAACACAAACCCTTCTTTCTAATTTCGTAGCTTCGTCAAGAGTCGCTTCCTTTACTCCCAAATGCACAAAATT
CCGCAGGAAAAGTGTCGTGTTTGGGAAGCAATCTGGCAACGCAAATGAATCTCAGTTTTTAGATGAAAATGGGGTCGTCGATGATATGGATGGGTACTTGAATTACCTCT
CTCTCGAATATGACTCCGTTTGGGATACAAAGCCTTCATGGTGCCAACCGTGGACTATAATGCTGACAGGATTCCTAGTGATTGCCTCTAGCTGGTTTATTATAAAGTCG
ATAGCAGTGACCGCAGTAATATTCTTATTAATATGCTTATGGTGGTACATCTTTCTTTACTCATATCCAAAGGCTTATTCTGACATGATTGCGGAGCGAAGAAAAAAGGT
TACTGATGGAGTAGAAGACACATTTGGTGTGGAGAGGACACAGTGATTAATGTAGAGAGTAGATGTACTTACCACCTGCTCTTCTTTTACTTTTTTGTGCATGTATTTTT
TTGTAACTTCTCAAAGTTTAGTAACTCTGTTCCATTTAAAGGAAAATAATAAAGAAAGATGATTACTTCTCA
Protein sequenceShow/hide protein sequence
MGAVSLLPLFLATSLRPYNFPSTQTLLSNFVASSRVASFTPKCTKFRRKSVVFGKQSGNANESQFLDENGVVDDMDGYLNYLSLEYDSVWDTKPSWCQPWTIMLTGFLVI
ASSWFIIKSIAVTAVIFLLICLWWYIFLYSYPKAYSDMIAERRKKVTDGVEDTFGVERTQ