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Tan0016787 (gene) of Snake gourd v1 genome

Gene IDTan0016787
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionTranscription factor MYB34
Genome locationLG01:41383911..41385554
RNA-Seq ExpressionTan0016787
SyntenyTan0016787
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022926214.1 uncharacterized protein LOC111433394 [Cucurbita moschata]4.1e-2570.21Show/hide
Query:  RAIRTYANPLVEELNPGIIRPEIQAPTFELKPVMFQMLQTIGQFHGLSSEDPHLHLKSFLGVSDSFKLPGEQVQAIELR----SGKPLAKNWRN
        RAIR YA+P VEELNP IIRPE+QA TFELKPVMFQMLQTIGQFHGL SEDPHLHLKSFLGVSDSF+        I L     S +  AK+W N
Subjt:  RAIRTYANPLVEELNPGIIRPEIQAPTFELKPVMFQMLQTIGQFHGLSSEDPHLHLKSFLGVSDSFKLPGEQVQAIELR----SGKPLAKNWRN

XP_022929949.1 uncharacterized protein LOC111436411 [Cucurbita moschata]2.3e-2858.27Show/hide
Query:  MNDFPGLEFFLDPEPERTFHRRRRIQKERMADFRGGPVD----PNNPQNNPGNQA----------------MRAIRTYANPLVEELNPGIIRPEIQAPTF
        MN   GLEF LDPE ERTF RRR  +K++M +     ++     N    NP   A                 RAIR YA+P VEELNP IIRPEIQ  TF
Subjt:  MNDFPGLEFFLDPEPERTFHRRRRIQKERMADFRGGPVD----PNNPQNNPGNQA----------------MRAIRTYANPLVEELNPGIIRPEIQAPTF

Query:  ELKPVMFQMLQTIGQFHGLSSEDPHLHLKSFLGVSDSFK
        ELKPVMFQMLQTIGQFHGL  EDPHLHLKSFLGVSDSF+
Subjt:  ELKPVMFQMLQTIGQFHGLSSEDPHLHLKSFLGVSDSFK

XP_022947838.1 uncharacterized protein LOC111451598 [Cucurbita moschata]3.7e-2671.28Show/hide
Query:  RAIRTYANPLVEELNPGIIRPEIQAPTFELKPVMFQMLQTIGQFHGLSSEDPHLHLKSFLGVSDSFKLPGEQVQAIELR----SGKPLAKNWRN
        RAIR YA+P VEELNP IIRPE+QA TFELKPVMFQMLQTIGQFHGLSS+DPHLHLKSFLGVSDSF+  G     I L     S +  AK+W N
Subjt:  RAIRTYANPLVEELNPGIIRPEIQAPTFELKPVMFQMLQTIGQFHGLSSEDPHLHLKSFLGVSDSFKLPGEQVQAIELR----SGKPLAKNWRN

XP_022960432.1 uncharacterized protein LOC111461168 [Cucurbita moschata]1.1e-2570.21Show/hide
Query:  RAIRTYANPLVEELNPGIIRPEIQAPTFELKPVMFQMLQTIGQFHGLSSEDPHLHLKSFLGVSDSFKLPGEQVQAIELR----SGKPLAKNWRN
        RAIR YA+P V+ELNP IIRPE+QA TFELKPVMFQMLQTIGQFHGL SEDPHLHLKSFLGVSDSF+  G     I L     S +  AK+W N
Subjt:  RAIRTYANPLVEELNPGIIRPEIQAPTFELKPVMFQMLQTIGQFHGLSSEDPHLHLKSFLGVSDSFKLPGEQVQAIELR----SGKPLAKNWRN

XP_030508936.1 uncharacterized protein LOC115723589 [Cannabis sativa]5.1e-2854.55Show/hide
Query:  LDPEPERTFHRRRRIQKER----MADFRGGPVDPNNPQNNP---GNQAMRAIRTYANPLVEELNPGIIRPEIQAPTFELKPVMFQMLQTIGQFHGLSSED
        +DPE ERTF +RR+ QK +    MAD  G  V   + + NP    +   RAIR YA P+  ELNPGI+RPEIQAP FELKPVMFQMLQT+GQF G  +ED
Subjt:  LDPEPERTFHRRRRIQKER----MADFRGGPVDPNNPQNNP---GNQAMRAIRTYANPLVEELNPGIIRPEIQAPTFELKPVMFQMLQTIGQFHGLSSED

Query:  PHLHLKSFLGVSDSFKLPGEQVQAIELR----SGKPLAKNWRN
        PHLH++SFL VSDSFKL G   +A+ L+    S +  A+ W N
Subjt:  PHLHLKSFLGVSDSFKLPGEQVQAIELR----SGKPLAKNWRN

TrEMBL top hitse value%identityAlignment
A0A6J1EEI2 uncharacterized protein LOC1114333942.0e-2570.21Show/hide
Query:  RAIRTYANPLVEELNPGIIRPEIQAPTFELKPVMFQMLQTIGQFHGLSSEDPHLHLKSFLGVSDSFKLPGEQVQAIELR----SGKPLAKNWRN
        RAIR YA+P VEELNP IIRPE+QA TFELKPVMFQMLQTIGQFHGL SEDPHLHLKSFLGVSDSF+        I L     S +  AK+W N
Subjt:  RAIRTYANPLVEELNPGIIRPEIQAPTFELKPVMFQMLQTIGQFHGLSSEDPHLHLKSFLGVSDSFKLPGEQVQAIELR----SGKPLAKNWRN

A0A6J1EQ90 uncharacterized protein LOC1114364111.1e-2858.27Show/hide
Query:  MNDFPGLEFFLDPEPERTFHRRRRIQKERMADFRGGPVD----PNNPQNNPGNQA----------------MRAIRTYANPLVEELNPGIIRPEIQAPTF
        MN   GLEF LDPE ERTF RRR  +K++M +     ++     N    NP   A                 RAIR YA+P VEELNP IIRPEIQ  TF
Subjt:  MNDFPGLEFFLDPEPERTFHRRRRIQKERMADFRGGPVD----PNNPQNNPGNQA----------------MRAIRTYANPLVEELNPGIIRPEIQAPTF

Query:  ELKPVMFQMLQTIGQFHGLSSEDPHLHLKSFLGVSDSFK
        ELKPVMFQMLQTIGQFHGL  EDPHLHLKSFLGVSDSF+
Subjt:  ELKPVMFQMLQTIGQFHGLSSEDPHLHLKSFLGVSDSFK

A0A6J1G7Q6 uncharacterized protein LOC1114515981.8e-2671.28Show/hide
Query:  RAIRTYANPLVEELNPGIIRPEIQAPTFELKPVMFQMLQTIGQFHGLSSEDPHLHLKSFLGVSDSFKLPGEQVQAIELR----SGKPLAKNWRN
        RAIR YA+P VEELNP IIRPE+QA TFELKPVMFQMLQTIGQFHGLSS+DPHLHLKSFLGVSDSF+  G     I L     S +  AK+W N
Subjt:  RAIRTYANPLVEELNPGIIRPEIQAPTFELKPVMFQMLQTIGQFHGLSSEDPHLHLKSFLGVSDSFKLPGEQVQAIELR----SGKPLAKNWRN

A0A6J1H7E4 uncharacterized protein LOC1114611685.2e-2670.21Show/hide
Query:  RAIRTYANPLVEELNPGIIRPEIQAPTFELKPVMFQMLQTIGQFHGLSSEDPHLHLKSFLGVSDSFKLPGEQVQAIELR----SGKPLAKNWRN
        RAIR YA+P V+ELNP IIRPE+QA TFELKPVMFQMLQTIGQFHGL SEDPHLHLKSFLGVSDSF+  G     I L     S +  AK+W N
Subjt:  RAIRTYANPLVEELNPGIIRPEIQAPTFELKPVMFQMLQTIGQFHGLSSEDPHLHLKSFLGVSDSFKLPGEQVQAIELR----SGKPLAKNWRN

U5CUI2 Retrotrans_gag domain-containing protein2.2e-2462.77Show/hide
Query:  RAIRTYANPLVEELNPGIIRPEIQAPTFELKPVMFQMLQTIGQFHGLSSEDPHLHLKSFLGVSDSFKLPGEQVQAIELR----SGKPLAKNWRN
        RAIR YA P+  ELNPGI+RPEIQAP FELKPVMFQMLQT+GQF G+ +EDPHLHL+SFL VSDSFK+ G   + + L+    S +  A++W N
Subjt:  RAIRTYANPLVEELNPGIIRPEIQAPTFELKPVMFQMLQTIGQFHGLSSEDPHLHLKSFLGVSDSFKLPGEQVQAIELR----SGKPLAKNWRN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATGATTTCCCAGGTTTAGAATTTTTCTTAGATCCTGAACCTGAGAGAACATTTCATAGAAGAAGGAGGATTCAAAAGGAAAGAATGGCAGATTTCCGTGGAGGTCC
TGTAGATCCTAATAATCCTCAGAATAACCCTGGAAACCAAGCTATGAGAGCCATTAGAACCTATGCCAATCCCTTGGTTGAAGAGCTAAATCCTGGGATCATTAGGCCAG
AAATCCAAGCCCCAACGTTTGAGCTTAAACCTGTCATGTTCCAAATGCTCCAAACCATAGGACAGTTTCATGGACTATCATCTGAAGATCCTCACTTGCATTTAAAATCC
TTCCTAGGGGTTAGTGATTCTTTTAAACTGCCAGGAGAACAAGTGCAAGCTATAGAGTTAAGGAGTGGAAAACCTTTAGCTAAAAATTGGAGAAACGAAGAAGAAAAACA
TAAGCGGAAGGACTTCGCAGTGCAATTCGAGGAAGAAAGAAGGAAGCACAGATGA
mRNA sequenceShow/hide mRNA sequence
ATGAATGATTTCCCAGGTTTAGAATTTTTCTTAGATCCTGAACCTGAGAGAACATTTCATAGAAGAAGGAGGATTCAAAAGGAAAGAATGGCAGATTTCCGTGGAGGTCC
TGTAGATCCTAATAATCCTCAGAATAACCCTGGAAACCAAGCTATGAGAGCCATTAGAACCTATGCCAATCCCTTGGTTGAAGAGCTAAATCCTGGGATCATTAGGCCAG
AAATCCAAGCCCCAACGTTTGAGCTTAAACCTGTCATGTTCCAAATGCTCCAAACCATAGGACAGTTTCATGGACTATCATCTGAAGATCCTCACTTGCATTTAAAATCC
TTCCTAGGGGTTAGTGATTCTTTTAAACTGCCAGGAGAACAAGTGCAAGCTATAGAGTTAAGGAGTGGAAAACCTTTAGCTAAAAATTGGAGAAACGAAGAAGAAAAACA
TAAGCGGAAGGACTTCGCAGTGCAATTCGAGGAAGAAAGAAGGAAGCACAGATGA
Protein sequenceShow/hide protein sequence
MNDFPGLEFFLDPEPERTFHRRRRIQKERMADFRGGPVDPNNPQNNPGNQAMRAIRTYANPLVEELNPGIIRPEIQAPTFELKPVMFQMLQTIGQFHGLSSEDPHLHLKS
FLGVSDSFKLPGEQVQAIELRSGKPLAKNWRNEEEKHKRKDFAVQFEEERRKHR