; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0016800 (gene) of Snake gourd v1 genome

Gene IDTan0016800
OrganismTrichosanthes anguina (Snake gourd v1)
Descriptionserine-rich protein-related
Genome locationLG01:19526004..19527854
RNA-Seq ExpressionTan0016800
SyntenyTan0016800
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KGN44385.1 hypothetical protein Csa_015645 [Cucumis sativus]3.7e-1359.72Show/hide
Query:  DMDMEELKKSPNLLMSPIALSRI-------TKSNCLCSPTTHIGSFRCRRHRTSAITRGASVGSNLSDLVRK
        D+++E+LK++P +L+SP   S I        K+NCLCSPTTHIGSFRCR HR S + RG SVGSNLSDL RK
Subjt:  DMDMEELKKSPNLLMSPIALSRI-------TKSNCLCSPTTHIGSFRCRRHRTSAITRGASVGSNLSDLVRK

KGN55991.1 hypothetical protein Csa_011649 [Cucumis sativus]4.8e-2162Show/hide
Query:  RMEAKQGKTSWKTESSKMAALPDYDMDMEELKKSPNLLMSPIALSRIT-----KSNCLCSPTTHIGSFRCRRHRTSAITRGASVGSNLSDLVRKSDAAGD
        R + KQ KT+ KT +SK A +   + + ++LKK+ NLLMSP ALSR+T     KSNCLCSPTTHIGSFRCRRHR+++I+RG SVGSNLSDLV+KS+A  D
Subjt:  RMEAKQGKTSWKTESSKMAALPDYDMDMEELKKSPNLLMSPIALSRIT-----KSNCLCSPTTHIGSFRCRRHRTSAITRGASVGSNLSDLVRKSDAAGD

TYK19387.1 putative PGPS/D10 protein [Cucumis melo var. makuwa]7.0e-2060Show/hide
Query:  RMEAKQGKTSWKTESSKMAALPDYDMDMEELKKSPNLLMSPIALSRIT-----KSNCLCSPTTHIGSFRCRRHRTSAITRGASVGSNLSDLVRKSDAAGD
        R ++KQ KT+ KT +SK A +   + + ++LKK+ +LLMSP ALSR+T     KSNCLCSPTTHIGSFRCRRHR++A++RGASVGSNLSDL +KS+   D
Subjt:  RMEAKQGKTSWKTESSKMAALPDYDMDMEELKKSPNLLMSPIALSRIT-----KSNCLCSPTTHIGSFRCRRHRTSAITRGASVGSNLSDLVRKSDAAGD

XP_010103953.1 uncharacterized protein LOC21403113 [Morus notabilis]2.2e-1347.62Show/hide
Query:  MEERMEAKQGKTSWKTESSKMAALPDYDMDMEELKKSPNLLMSPIALSRITKS-----NCLCSPTTHIGSFRCRRHRTSAITRGASVGSNLSDLVRKSDA
        M+E++E +  +   +   +    +P  D+++ ELKK  +LL SP A   +TKS     NCLCSPTTH GSFRCR HR+S + RG SVGSNLS+L RK  A
Subjt:  MEERMEAKQGKTSWKTESSKMAALPDYDMDMEELKKSPNLLMSPIALSRITKS-----NCLCSPTTHIGSFRCRRHRTSAITRGASVGSNLSDLVRKSDA

Query:  AGDSV
          DS+
Subjt:  AGDSV

XP_022143490.1 uncharacterized protein LOC111013367 [Momordica charantia]2.4e-2065.35Show/hide
Query:  EAKQGKTSWKTESSKMAALPDYDMDMEELKKSP-NLLMSPIALSRI-----TKSNCLCSPTTHIGSFRCRRHRTSAITRGASVGSNLSDLVRKSDAAGDS
        E KQ K + KT ++K +ALP+ D+D  ELKKS  NL+MSP ALSR+     TKSNCLCSPTTHIGSFRCRRHR++AI+RG SVGSNLSDL +KS A  DS
Subjt:  EAKQGKTSWKTESSKMAALPDYDMDMEELKKSP-NLLMSPIALSRI-----TKSNCLCSPTTHIGSFRCRRHRTSAITRGASVGSNLSDLVRKSDAAGDS

Query:  V
        +
Subjt:  V

TrEMBL top hitse value%identityAlignment
A0A0A0K3W3 Uncharacterized protein1.8e-1359.72Show/hide
Query:  DMDMEELKKSPNLLMSPIALSRI-------TKSNCLCSPTTHIGSFRCRRHRTSAITRGASVGSNLSDLVRK
        D+++E+LK++P +L+SP   S I        K+NCLCSPTTHIGSFRCR HR S + RG SVGSNLSDL RK
Subjt:  DMDMEELKKSPNLLMSPIALSRI-------TKSNCLCSPTTHIGSFRCRRHRTSAITRGASVGSNLSDLVRK

A0A0A0L7C7 Uncharacterized protein2.3e-2162Show/hide
Query:  RMEAKQGKTSWKTESSKMAALPDYDMDMEELKKSPNLLMSPIALSRIT-----KSNCLCSPTTHIGSFRCRRHRTSAITRGASVGSNLSDLVRKSDAAGD
        R + KQ KT+ KT +SK A +   + + ++LKK+ NLLMSP ALSR+T     KSNCLCSPTTHIGSFRCRRHR+++I+RG SVGSNLSDLV+KS+A  D
Subjt:  RMEAKQGKTSWKTESSKMAALPDYDMDMEELKKSPNLLMSPIALSRIT-----KSNCLCSPTTHIGSFRCRRHRTSAITRGASVGSNLSDLVRKSDAAGD

A0A5D3D753 Putative PGPS/D10 protein3.4e-2060Show/hide
Query:  RMEAKQGKTSWKTESSKMAALPDYDMDMEELKKSPNLLMSPIALSRIT-----KSNCLCSPTTHIGSFRCRRHRTSAITRGASVGSNLSDLVRKSDAAGD
        R ++KQ KT+ KT +SK A +   + + ++LKK+ +LLMSP ALSR+T     KSNCLCSPTTHIGSFRCRRHR++A++RGASVGSNLSDL +KS+   D
Subjt:  RMEAKQGKTSWKTESSKMAALPDYDMDMEELKKSPNLLMSPIALSRIT-----KSNCLCSPTTHIGSFRCRRHRTSAITRGASVGSNLSDLVRKSDAAGD

A0A6J1CNY2 uncharacterized protein LOC1110133671.2e-2065.35Show/hide
Query:  EAKQGKTSWKTESSKMAALPDYDMDMEELKKSP-NLLMSPIALSRI-----TKSNCLCSPTTHIGSFRCRRHRTSAITRGASVGSNLSDLVRKSDAAGDS
        E KQ K + KT ++K +ALP+ D+D  ELKKS  NL+MSP ALSR+     TKSNCLCSPTTHIGSFRCRRHR++AI+RG SVGSNLSDL +KS A  DS
Subjt:  EAKQGKTSWKTESSKMAALPDYDMDMEELKKSP-NLLMSPIALSRI-----TKSNCLCSPTTHIGSFRCRRHRTSAITRGASVGSNLSDLVRKSDAAGDS

Query:  V
        +
Subjt:  V

W9SBP1 Uncharacterized protein1.1e-1347.62Show/hide
Query:  MEERMEAKQGKTSWKTESSKMAALPDYDMDMEELKKSPNLLMSPIALSRITKS-----NCLCSPTTHIGSFRCRRHRTSAITRGASVGSNLSDLVRKSDA
        M+E++E +  +   +   +    +P  D+++ ELKK  +LL SP A   +TKS     NCLCSPTTH GSFRCR HR+S + RG SVGSNLS+L RK  A
Subjt:  MEERMEAKQGKTSWKTESSKMAALPDYDMDMEELKKSPNLLMSPIALSRITKS-----NCLCSPTTHIGSFRCRRHRTSAITRGASVGSNLSDLVRKSDA

Query:  AGDSV
          DS+
Subjt:  AGDSV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G24577.1 unknown protein5.5e-0754.35Show/hide
Query:  ITKSNCLCSPTTHIGSFRCRRHRTSAITRGASVGSN-LSDLVRKSD
        ITK+ C+CSPTTH GSF+C+ HRT ++ R  SV +N L  L+ K D
Subjt:  ITKSNCLCSPTTHIGSFRCRRHRTSAITRGASVGSN-LSDLVRKSD

AT1G67910.1 unknown protein2.1e-0663.64Show/hide
Query:  ITKSNCLCSPTTHIGSFRCRRHRTSAITRGASV
        +TK+NCLCSPTTH GSFRCR HR+ ++ R  S+
Subjt:  ITKSNCLCSPTTHIGSFRCRRHRTSAITRGASV

AT1G67910.2 unknown protein2.1e-0663.64Show/hide
Query:  ITKSNCLCSPTTHIGSFRCRRHRTSAITRGASV
        +TK+NCLCSPTTH GSFRCR HR+ ++ R  S+
Subjt:  ITKSNCLCSPTTHIGSFRCRRHRTSAITRGASV

AT3G13227.1 serine-rich protein-related5.5e-0734.82Show/hide
Query:  MEAKQGKTSWKTESSKMAALPDYDMDMEELKKSPNLLMSP--------------IALSRITKSNCLCSPTTHIGSFRCRRHRTSA---ITRGASVGSNLS
        ME K+ +   +          + D+  +++K+     MSP              ++ S   + NCLC+PTTH GSFRCR HR +A   ++RG SV SNLS
Subjt:  MEAKQGKTSWKTESSKMAALPDYDMDMEELKKSPNLLMSP--------------IALSRITKSNCLCSPTTHIGSFRCRRHRTSA---ITRGASVGSNLS

Query:  DLVRKSDAAGDS
         L     A GDS
Subjt:  DLVRKSDAAGDS

AT5G55980.1 serine-rich protein-related9.1e-1038.54Show/hide
Query:  QGKTSWKTESSKMAALPDYDMDMEELKK---SPNLLMSPIALSRITKSNCLCSPTTHIGSFRCRRHRTSAITRGASVGSNLSDLV-RKSDAAGDSV
        + +  + T  +K+   P     +E   +   SP+L     +  + T+ NCLCSPTTH GSFRCR HR  ++TR  S+GSNL+ L+  KS    DS+
Subjt:  QGKTSWKTESSKMAALPDYDMDMEELKK---SPNLLMSPIALSRITKSNCLCSPTTHIGSFRCRRHRTSAITRGASVGSNLSDLV-RKSDAAGDSV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGGAAAGGATGGAGGCAAAACAGGGGAAAACAAGCTGGAAAACAGAGAGTTCAAAAATGGCGGCGTTGCCAGATTACGACATGGACATGGAAGAGCTGAAGAAAAG
CCCGAATTTGCTGATGTCGCCAATCGCCTTATCTCGCATCACAAAATCCAACTGTCTGTGTTCTCCCACCACCCATATCGGATCTTTTAGGTGCAGGCGTCACCGGACCT
CCGCCATCACTCGCGGCGCCTCCGTCGGCTCCAATCTCTCCGACTTGGTTCGCAAGTCTGACGCCGCCGGTGACTCCGTTTGA
mRNA sequenceShow/hide mRNA sequence
GGCTTTCCTTCAATCTCTCCTCTCTCCTTTGGCAGAGAGGCTGCAGCCTTTGAAATTCTCCACCCGCCGGCGGTTTTTCCAGACTCCGGCATATAAACACAAGTTAAATA
ATGGAGGAAAGGATGGAGGCAAAACAGGGGAAAACAAGCTGGAAAACAGAGAGTTCAAAAATGGCGGCGTTGCCAGATTACGACATGGACATGGAAGAGCTGAAGAAAAG
CCCGAATTTGCTGATGTCGCCAATCGCCTTATCTCGCATCACAAAATCCAACTGTCTGTGTTCTCCCACCACCCATATCGGATCTTTTAGGTGCAGGCGTCACCGGACCT
CCGCCATCACTCGCGGCGCCTCCGTCGGCTCCAATCTCTCCGACTTGGTTCGCAAGTCTGACGCCGCCGGTGACTCCGTTTGAGAATATCACATCGGCGCTAACCCAAGC
TCTCTCTTTTAGGAAAACCTTTAATTTCAATTCTAATGCTCTCTTCTCATTTTAATAAAACCATGTAATAGCTAGTGATTATGAATCCTTTTTTTGTTCATGCTTATGTG
TCCCTCTTCTTCCTTTCGTTTATTTATTTAGTCTCTTATGTTTCAGCTTCATCA
Protein sequenceShow/hide protein sequence
MEERMEAKQGKTSWKTESSKMAALPDYDMDMEELKKSPNLLMSPIALSRITKSNCLCSPTTHIGSFRCRRHRTSAITRGASVGSNLSDLVRKSDAAGDSV