; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0016851 (gene) of Snake gourd v1 genome

Gene IDTan0016851
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionMitochondrial protein
Genome locationContig00127:82497..94300
RNA-Seq ExpressionTan0016851
SyntenyTan0016851
Gene Ontology termsGO:0019684 - photosynthesis, light reaction (biological process)
GO:0009523 - photosystem II (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0005524 - ATP binding (molecular function)
InterPro domainsIPR007826 - Photosystem II PsbM


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAN70459.1 hypothetical protein VITISV_033464 [Vitis vinifera]8.8e-1160Show/hide
Query:  SMSKRILVPKQSNYQFSSIVDDPSTDVESVLEK-----------------------------SSSPVKGDKALVGRIPFH
        S+SK ILVPKQSNYQFSSIVDDPSTDVESVLEK                             SSSPVKGDKALVGR PFH
Subjt:  SMSKRILVPKQSNYQFSSIVDDPSTDVESVLEK-----------------------------SSSPVKGDKALVGRIPFH
GEX75063.1 hypothetical protein [Tanacetum cinerariifolium]7.7e-0783.78Show/hide
Query:  PFGRASRSSPYFATYVGSVLQGLLELSSTCSWLDRSL
        PF  + +SSPYFATYVGSVLQGLLELSSTCSWLDRS+
Subjt:  PFGRASRSSPYFATYVGSVLQGLLELSSTCSWLDRSL
KAD4584270.1 hypothetical protein E3N88_21871 [Mikania micrantha]7.7e-0753.42Show/hide
Query:  SRPIPL-PRFFPLSFFHYSYPRGVRPLGRQTTTRVSPFGRASRSSPYFATYVGSVLQGLLELSSTCSWLDRSL
        +RP+P  P   P    H  Y  G   +    +    PF  + +SSPYFATYVGSVLQGLLELSSTCSWLDRS+
Subjt:  SRPIPL-PRFFPLSFFHYSYPRGVRPLGRQTTTRVSPFGRASRSSPYFATYVGSVLQGLLELSSTCSWLDRSL
KAG8362767.1 hypothetical protein BUALT_BualtUnG0041600 [Buddleja alternifolia]1.7e-0957.14Show/hide
Query:  SSIQVVIKETRKNKNPTRELKLPKTTYDRGKLKKGLGSEELPEQGVLTALIAGKSLRLPPEFPQGQAKPTQELHQLT
        SSI ++    RK        + P   +   KLKKGLGSEELPEQGVLTALIAGKSLRLPPEFPQG      +LH  T
Subjt:  SSIQVVIKETRKNKNPTRELKLPKTTYDRGKLKKGLGSEELPEQGVLTALIAGKSLRLPPEFPQGQAKPTQELHQLT
TXG46219.1 hypothetical protein EZV62_028250 [Acer yangbiense]7.7e-0783.78Show/hide
Query:  PFGRASRSSPYFATYVGSVLQGLLELSSTCSWLDRSL
        PF  + +SSPYFATYVGSVLQGLLELSSTCSWLDRS+
Subjt:  PFGRASRSSPYFATYVGSVLQGLLELSSTCSWLDRSL
TrEMBL top hitse value%identityAlignment
A0A5A7Q1W2 Mitochondrial protein3.7e-0783.78Show/hide
Query:  PFGRASRSSPYFATYVGSVLQGLLELSSTCSWLDRSL
        PF  + +SSPYFATYVGSVLQGLLELSSTCSWLDRS+
Subjt:  PFGRASRSSPYFATYVGSVLQGLLELSSTCSWLDRSL
A0A5C7GP19 Uncharacterized protein3.7e-0783.78Show/hide
Query:  PFGRASRSSPYFATYVGSVLQGLLELSSTCSWLDRSL
        PF  + +SSPYFATYVGSVLQGLLELSSTCSWLDRS+
Subjt:  PFGRASRSSPYFATYVGSVLQGLLELSSTCSWLDRSL
A0A5N6NAN1 Uncharacterized protein3.7e-0753.42Show/hide
Query:  SRPIPL-PRFFPLSFFHYSYPRGVRPLGRQTTTRVSPFGRASRSSPYFATYVGSVLQGLLELSSTCSWLDRSL
        +RP+P  P   P    H  Y  G   +    +    PF  + +SSPYFATYVGSVLQGLLELSSTCSWLDRS+
Subjt:  SRPIPL-PRFFPLSFFHYSYPRGVRPLGRQTTTRVSPFGRASRSSPYFATYVGSVLQGLLELSSTCSWLDRSL
A0A6S7KR95 Uncharacterized protein3.7e-0783.78Show/hide
Query:  PFGRASRSSPYFATYVGSVLQGLLELSSTCSWLDRSL
        PF  + +SSPYFATYVGSVLQGLLELSSTCSWLDRS+
Subjt:  PFGRASRSSPYFATYVGSVLQGLLELSSTCSWLDRSL
A5BRD7 Uncharacterized protein4.2e-1160Show/hide
Query:  SMSKRILVPKQSNYQFSSIVDDPSTDVESVLEK-----------------------------SSSPVKGDKALVGRIPFH
        S+SK ILVPKQSNYQFSSIVDDPSTDVESVLEK                             SSSPVKGDKALVGR PFH
Subjt:  SMSKRILVPKQSNYQFSSIVDDPSTDVESVLEK-----------------------------SSSPVKGDKALVGRIPFH
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGCCTGATGAGTCGACCAATTCCTCTACCCCGCTTCTTCCCCTTATCTTTCTTTCACTATTCCTACCCCCGGGGTGTCCGCCCCTTAGGTCGCCAAACTACGACGAG
AGTTTCGCCTTTCGGCCGCGCCAGTCGCTCATCCCCGTATTTTGCCACATACGTGGGTTCGGTCCTCCAAGGCCTGTTAGAGCTCTCTTCAACCTGCTCATGGCTAGATC
GATCGCTTCGTGTTTGTTTTTCTTCAAACCCCCAATCCGCTCTCGCTCGCCCTATTACTTCAGAGTCAGGCACGAGACGAAAGGAAGGTAAACAGGAGGCAGGCGCAATA
GAAATGCCACCCGGGTTTATAGACCAATCAACCAGGAAAGAAAGTTCCAGCTACTGGAAAACAACTCCCTCCGCCCTTGTTCTGGTTCTATATCAGACAAGACCCCTTGC
CGTCGGACTTAATCATAACTTCTCGCTTTCTCACGCCCTTATTAGAGTATTATCGTCGACGGCTTTCGGGCAGGGACACCAACACCTTTTGGCAACACTCGATTTTTGGA
ATTTTCGAACTTTGCTCCCGACCTCAGGTTACCGGACACGTAGGGCACTGGCCTTGGTTTGCCCACCAACGACTTTCCGCTTGGGAAATACACAACCACCTTTTCTGGAG
CAGGAACCTGAACGAGCGCAACAACTGGCGCCTTTCATTGGTTCTACGGTTGCTAGCACTGATAATAGATTCAATCAAAGGTCGAATTCACCTCCGAACGTCTTTCGTAC
CAACCAGAGGGCGCGAAAGATTTTTCATCTCTATGGGATCCCGAGTTATTGCGAATTAAAGAAAAATGAAACGATGTTTATTCTCAATCTTGTCGCATTTATTGCTACAG
CACTGTTCATTCTAGTTCCTACAGCTTCTCAATTCGATTTCATATGTAGTGAGTTTGAATTGACCCGGTTAGCTAGAAGTTTTCAAGTCAAGCGAGAAAGCAAGTGGATC
AGACAAAGTCTTTCTGGTTGTCTCACCAAAGAGTACTGCGTGGCGTGTGTCGCTTATGCGCGCCTATGGCGGGTGTTGAGATCGACACGAATCCTTACCGCATCCGATAT
CCCTAGCAAGGCTCGAGAGACCTCGATGTCTAAGCGGATTCTTGTTCCTAAACAGAGCAACTATCAGTTTAGTAGCATTGTGGACGACCCGTCGACAGACGTCGAGAGTG
TTTTGGAGAAGTCTTCATCTCCGGTGAAAGGTGATAAGGCCCTAGTGGGCCGGATTCCCTTCCATTTGGAAGATGTTTGCAATCGCTTTATGGGATCGCGCGGTTCTTTA
TCCTACCCGAGCGAAAGCGGAGTCTCCAGAGATCAATCAACCGGGCGCCTCCAAAGCAGTATCCAAGTTGTAATAAAAGAAACAAGAAAGAATAAGAATCCAACTAGAGA
ACTGAAGCTTCCCAAGACCACTTACGATAGGGGCAAGTTGAAGAAGGGTTTGGGTTCCGAGGAGCTACCAGAGCAGGGGGTTTTAACTGCCCTGATAGCCGGGAAGAGCC
TTAGACTTCCGCCGGAGTTCCCGCAGGGACAGGCCAAACCAACCCAGGAACTTCACCAGCTAACTCCACACGTCGACCCAGGAGGTGAGGTCTCCCAACGCTGCCGATTG
GATGCCCTGAGTCATTTGGTTTTGACGCGTGTCTGTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGGCCTGATGAGTCGACCAATTCCTCTACCCCGCTTCTTCCCCTTATCTTTCTTTCACTATTCCTACCCCCGGGGTGTCCGCCCCTTAGGTCGCCAAACTACGACGAG
AGTTTCGCCTTTCGGCCGCGCCAGTCGCTCATCCCCGTATTTTGCCACATACGTGGGTTCGGTCCTCCAAGGCCTGTTAGAGCTCTCTTCAACCTGCTCATGGCTAGATC
GATCGCTTCGTGTTTGTTTTTCTTCAAACCCCCAATCCGCTCTCGCTCGCCCTATTACTTCAGAGTCAGGCACGAGACGAAAGGAAGGTAAACAGGAGGCAGGCGCAATA
GAAATGCCACCCGGGTTTATAGACCAATCAACCAGGAAAGAAAGTTCCAGCTACTGGAAAACAACTCCCTCCGCCCTTGTTCTGGTTCTATATCAGACAAGACCCCTTGC
CGTCGGACTTAATCATAACTTCTCGCTTTCTCACGCCCTTATTAGAGTATTATCGTCGACGGCTTTCGGGCAGGGACACCAACACCTTTTGGCAACACTCGATTTTTGGA
ATTTTCGAACTTTGCTCCCGACCTCAGGTTACCGGACACGTAGGGCACTGGCCTTGGTTTGCCCACCAACGACTTTCCGCTTGGGAAATACACAACCACCTTTTCTGGAG
CAGGAACCTGAACGAGCGCAACAACTGGCGCCTTTCATTGGTTCTACGGTTGCTAGCACTGATAATAGATTCAATCAAAGGTCGAATTCACCTCCGAACGTCTTTCGTAC
CAACCAGAGGGCGCGAAAGATTTTTCATCTCTATGGGATCCCGAGTTATTGCGAATTAAAGAAAAATGAAACGATGTTTATTCTCAATCTTGTCGCATTTATTGCTACAG
CACTGTTCATTCTAGTTCCTACAGCTTCTCAATTCGATTTCATATGTAGTGAGTTTGAATTGACCCGGTTAGCTAGAAGTTTTCAAGTCAAGCGAGAAAGCAAGTGGATC
AGACAAAGTCTTTCTGGTTGTCTCACCAAAGAGTACTGCGTGGCGTGTGTCGCTTATGCGCGCCTATGGCGGGTGTTGAGATCGACACGAATCCTTACCGCATCCGATAT
CCCTAGCAAGGCTCGAGAGACCTCGATGTCTAAGCGGATTCTTGTTCCTAAACAGAGCAACTATCAGTTTAGTAGCATTGTGGACGACCCGTCGACAGACGTCGAGAGTG
TTTTGGAGAAGTCTTCATCTCCGGTGAAAGGTGATAAGGCCCTAGTGGGCCGGATTCCCTTCCATTTGGAAGATGTTTGCAATCGCTTTATGGGATCGCGCGGTTCTTTA
TCCTACCCGAGCGAAAGCGGAGTCTCCAGAGATCAATCAACCGGGCGCCTCCAAAGCAGTATCCAAGTTGTAATAAAAGAAACAAGAAAGAATAAGAATCCAACTAGAGA
ACTGAAGCTTCCCAAGACCACTTACGATAGGGGCAAGTTGAAGAAGGGTTTGGGTTCCGAGGAGCTACCAGAGCAGGGGGTTTTAACTGCCCTGATAGCCGGGAAGAGCC
TTAGACTTCCGCCGGAGTTCCCGCAGGGACAGGCCAAACCAACCCAGGAACTTCACCAGCTAACTCCACACGTCGACCCAGGAGGTGAGGTCTCCCAACGCTGCCGATTG
GATGCCCTGAGTCATTTGGTTTTGACGCGTGTCTGTTAG
Protein sequenceShow/hide protein sequence
MGLMSRPIPLPRFFPLSFFHYSYPRGVRPLGRQTTTRVSPFGRASRSSPYFATYVGSVLQGLLELSSTCSWLDRSLRVCFSSNPQSALARPITSESGTRRKEGKQEAGAI
EMPPGFIDQSTRKESSSYWKTTPSALVLVLYQTRPLAVGLNHNFSLSHALIRVLSSTAFGQGHQHLLATLDFWNFRTLLPTSGYRTRRALALVCPPTTFRLGNTQPPFLE
QEPERAQQLAPFIGSTVASTDNRFNQRSNSPPNVFRTNQRARKIFHLYGIPSYCELKKNETMFILNLVAFIATALFILVPTASQFDFICSEFELTRLARSFQVKRESKWI
RQSLSGCLTKEYCVACVAYARLWRVLRSTRILTASDIPSKARETSMSKRILVPKQSNYQFSSIVDDPSTDVESVLEKSSSPVKGDKALVGRIPFHLEDVCNRFMGSRGSL
SYPSESGVSRDQSTGRLQSSIQVVIKETRKNKNPTRELKLPKTTYDRGKLKKGLGSEELPEQGVLTALIAGKSLRLPPEFPQGQAKPTQELHQLTPHVDPGGEVSQRCRL
DALSHLVLTRVC