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Tan0016867 (gene) of Snake gourd v1 genome

Gene IDTan0016867
OrganismTrichosanthes anguina (Snake gourd v1)
Description10 kDa chaperonin-like
Genome locationLG04:55576917..55579707
RNA-Seq ExpressionTan0016867
SyntenyTan0016867
Gene Ontology termsGO:0005488 - binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
BBG99597.1 chaperonin 10 [Prunus dulcis]1.7e-0545.05Show/hide
Query:  MVKHYVPLLNRVLIEKIVPLLKPISTFCF--LRSPLNYENVIFVGRGTRDKEENIIFVTVKE----------GTKVELGEKQIFEDEWRKG
        M K  VPLLNRVL+E+IVP  K  +        + LN   VI VG GTRDKE + I  TVKE          GT+V+LG+K+ F  E  +G
Subjt:  MVKHYVPLLNRVLIEKIVPLLKPISTFCF--LRSPLNYENVIFVGRGTRDKEENIIFVTVKE----------GTKVELGEKQIFEDEWRKG

XP_022154455.1 10 kDa chaperonin, mitochondrial-like [Momordica charantia]9.1e-0750.56Show/hide
Query:  MVKHYVPLLNRVLIEKIVPLLKPISTFCF--LRSPLNYENVIFVGRGTRDKEENIIFVTVKE----------GTKVELGEKQ--IFEDE
        M K  VPLLNRVLIEKIVP  K  +        S LN   V+ VG GTRD+E N+I VTVKE          GT+V+LG+KQ  +F DE
Subjt:  MVKHYVPLLNRVLIEKIVPLLKPISTFCF--LRSPLNYENVIFVGRGTRDKEENIIFVTVKE----------GTKVELGEKQ--IFEDE

XP_022931931.1 10 kDa chaperonin, mitochondrial-like [Cucurbita moschata]9.1e-0752.38Show/hide
Query:  MVKHYVPLLNRVLIEKIVPLLKPISTFCF--LRSPLNYENVIFVGRGTRDKEENIIFVTVKE----------GTKVELGEKQIF
        M K  VPLLNRVLIEKIVP  K  S        S LN   VI VG GTRD++ NII V VKE          GT+V+LGEKQ +
Subjt:  MVKHYVPLLNRVLIEKIVPLLKPISTFCF--LRSPLNYENVIFVGRGTRDKEENIIFVTVKE----------GTKVELGEKQIF

XP_022966634.1 10 kDa chaperonin, mitochondrial-like [Cucurbita maxima]7.0e-0752.81Show/hide
Query:  MVKHYVPLLNRVLIEKIVPLLKPISTFCF--LRSPLNYENVIFVGRGTRDKEENIIFVTVKE----------GTKVELGEKQ--IFEDE
        M K  VPLLNRVLIEKIVP  K  S        S LN   VI VG GTRD++ NII V VKE          GT+V+LGEKQ  +F DE
Subjt:  MVKHYVPLLNRVLIEKIVPLLKPISTFCF--LRSPLNYENVIFVGRGTRDKEENIIFVTVKE----------GTKVELGEKQ--IFEDE

XP_038881343.1 10 kDa chaperonin, mitochondrial-like [Benincasa hispida]1.6e-0651.69Show/hide
Query:  MVKHYVPLLNRVLIEKIVPLLKPISTFCF--LRSPLNYENVIFVGRGTRDKEENIIFVTVKE----------GTKVELGEKQ--IFEDE
        M K  VPLLNRVLIEKIVP  K  S        S LN   VI +G G RD+E  II VTVKE          GT+V+LGEKQ  +F DE
Subjt:  MVKHYVPLLNRVLIEKIVPLLKPISTFCF--LRSPLNYENVIFVGRGTRDKEENIIFVTVKE----------GTKVELGEKQ--IFEDE

TrEMBL top hitse value%identityAlignment
A0A3S3N2Y9 Chaperonin, mitochondrial-like protein1.1e-0546.07Show/hide
Query:  MVKHYVPLLNRVLIEKIVPLLKPISTFCF--LRSPLNYENVIFVGRGTRDKEENIIFVTVKE----------GTKVELGEKQ--IFEDE
        M K  +P LNRVLIEKIVP  K  +        S LN   V+ VG GTRDK+ N+I VT+KE          GT+V+LG+K+  +F DE
Subjt:  MVKHYVPLLNRVLIEKIVPLLKPISTFCF--LRSPLNYENVIFVGRGTRDKEENIIFVTVKE----------GTKVELGEKQ--IFEDE

A0A4Y1R6U7 Chaperonin 108.3e-0645.05Show/hide
Query:  MVKHYVPLLNRVLIEKIVPLLKPISTFCF--LRSPLNYENVIFVGRGTRDKEENIIFVTVKE----------GTKVELGEKQIFEDEWRKG
        M K  VPLLNRVL+E+IVP  K  +        + LN   VI VG GTRDKE + I  TVKE          GT+V+LG+K+ F  E  +G
Subjt:  MVKHYVPLLNRVLIEKIVPLLKPISTFCF--LRSPLNYENVIFVGRGTRDKEENIIFVTVKE----------GTKVELGEKQIFEDEWRKG

A0A6J1DJN1 10 kDa chaperonin, mitochondrial-like4.4e-0750.56Show/hide
Query:  MVKHYVPLLNRVLIEKIVPLLKPISTFCF--LRSPLNYENVIFVGRGTRDKEENIIFVTVKE----------GTKVELGEKQ--IFEDE
        M K  VPLLNRVLIEKIVP  K  +        S LN   V+ VG GTRD+E N+I VTVKE          GT+V+LG+KQ  +F DE
Subjt:  MVKHYVPLLNRVLIEKIVPLLKPISTFCF--LRSPLNYENVIFVGRGTRDKEENIIFVTVKE----------GTKVELGEKQ--IFEDE

A0A6J1EUZ7 10 kDa chaperonin, mitochondrial-like4.4e-0752.38Show/hide
Query:  MVKHYVPLLNRVLIEKIVPLLKPISTFCF--LRSPLNYENVIFVGRGTRDKEENIIFVTVKE----------GTKVELGEKQIF
        M K  VPLLNRVLIEKIVP  K  S        S LN   VI VG GTRD++ NII V VKE          GT+V+LGEKQ +
Subjt:  MVKHYVPLLNRVLIEKIVPLLKPISTFCF--LRSPLNYENVIFVGRGTRDKEENIIFVTVKE----------GTKVELGEKQIF

A0A6J1HUD0 10 kDa chaperonin, mitochondrial-like3.4e-0752.81Show/hide
Query:  MVKHYVPLLNRVLIEKIVPLLKPISTFCF--LRSPLNYENVIFVGRGTRDKEENIIFVTVKE----------GTKVELGEKQ--IFEDE
        M K  VPLLNRVLIEKIVP  K  S        S LN   VI VG GTRD++ NII V VKE          GT+V+LGEKQ  +F DE
Subjt:  MVKHYVPLLNRVLIEKIVPLLKPISTFCF--LRSPLNYENVIFVGRGTRDKEENIIFVTVKE----------GTKVELGEKQ--IFEDE

SwissProt top hitse value%identityAlignment
P34893 10 kDa chaperonin, mitochondrial6.8e-0537.08Show/hide
Query:  MVKHYVPLLNRVLIEKIVPLLKPISTFCF--LRSPLNYENVIFVGRGTRDKEENIIFVTVKE----------GTKVELGEKQ--IFEDE
        M+K  +P  NR+L+++++   K  S        S LN   VI VG G+RDK+  +I V+VKE          GT+V+LGE +  +F DE
Subjt:  MVKHYVPLLNRVLIEKIVPLLKPISTFCF--LRSPLNYENVIFVGRGTRDKEENIIFVTVKE----------GTKVELGEKQ--IFEDE

Q96539 10 kDa chaperonin5.2e-0538.2Show/hide
Query:  MVKHYVPLLNRVLIEKIVPLLKPISTFCF--LRSPLNYENVIFVGRGTRDKEENIIFVTVKE----------GTKVELGEKQ--IFEDE
        M+K  +P  NR+L++ ++   K  S        S LN   VI VG G+RDK+  +I V+VKE          GT+V+LGEK+  +F DE
Subjt:  MVKHYVPLLNRVLIEKIVPLLKPISTFCF--LRSPLNYENVIFVGRGTRDKEENIIFVTVKE----------GTKVELGEKQ--IFEDE

Arabidopsis top hitse value%identityAlignment
AT1G14980.1 chaperonin 104.8e-0637.08Show/hide
Query:  MVKHYVPLLNRVLIEKIVPLLKPISTFCF--LRSPLNYENVIFVGRGTRDKEENIIFVTVKE----------GTKVELGEKQ--IFEDE
        M+K  +P  NR+L+++++   K  S        S LN   VI VG G+RDK+  +I V+VKE          GT+V+LGE +  +F DE
Subjt:  MVKHYVPLLNRVLIEKIVPLLKPISTFCF--LRSPLNYENVIFVGRGTRDKEENIIFVTVKE----------GTKVELGEKQ--IFEDE

AT1G23100.1 GroES-like family protein1.0e-0843.82Show/hide
Query:  MVKHYVPLLNRVLIEKIVPLLKPISTFCF--LRSPLNYENVIFVGRGTRDKEENIIFVTVKE----------GTKVELGEKQ--IFEDE
        M K  +P LNRVL+EKI+P  K +S        S LN   VI VG G RD+  N+I V+VKE          GT+V+LGEK+  ++ DE
Subjt:  MVKHYVPLLNRVLIEKIVPLLKPISTFCF--LRSPLNYENVIFVGRGTRDKEENIIFVTVKE----------GTKVELGEKQ--IFEDE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGAAGCATTATGTTCCATTGTTGAATCGCGTTCTGATTGAGAAGATCGTCCCCCTGCTAAAACCAATTTCGACATTTTGCTTCCTGAGAAGTCCACTAAACTATGA
AAATGTTATCTTTGTTGGACGTGGGACTCGTGACAAAGAGGAAAACATTATTTTTGTTACTGTAAAGGAAGGAACTAAAGTCGAGCTTGGAGAAAAGCAAATATTTGAGG
ATGAATGGAGGAAAGGATAG
mRNA sequenceShow/hide mRNA sequence
ATGGTGAAGCATTATGTTCCATTGTTGAATCGCGTTCTGATTGAGAAGATCGTCCCCCTGCTAAAACCAATTTCGACATTTTGCTTCCTGAGAAGTCCACTAAACTATGA
AAATGTTATCTTTGTTGGACGTGGGACTCGTGACAAAGAGGAAAACATTATTTTTGTTACTGTAAAGGAAGGAACTAAAGTCGAGCTTGGAGAAAAGCAAATATTTGAGG
ATGAATGGAGGAAAGGATAG
Protein sequenceShow/hide protein sequence
MVKHYVPLLNRVLIEKIVPLLKPISTFCFLRSPLNYENVIFVGRGTRDKEENIIFVTVKEGTKVELGEKQIFEDEWRKG