; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0016868 (gene) of Snake gourd v1 genome

Gene IDTan0016868
OrganismTrichosanthes anguina (Snake gourd v1)
Descriptionphotosystem II 22 kDa protein, chloroplastic-like
Genome locationLG11:10937343..10940565
RNA-Seq ExpressionTan0016868
SyntenyTan0016868
Gene Ontology termsGO:0010027 - thylakoid membrane organization (biological process)
GO:0010196 - nonphotochemical quenching (biological process)
GO:0009535 - chloroplast thylakoid membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0003729 - mRNA binding (molecular function)
GO:0019904 - protein domain specific binding (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR022796 - Chlorophyll A-B binding protein
IPR023329 - Chlorophyll a/b binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6602094.1 Photosystem II 22 kDa protein, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]4.6e-13894.44Show/hide
Query:  MLLSSGVCAGHGVGVKREIASLTQRLRPNAQFSRLFFHPLPSNSVSSPARGFRTLAVFKSRTKVPTKKVVKPKEKVEDGIFGTSGGIGFTKQNELFVGRV
        M+LSSGVCA HGV +KREIASLTQRLRPNAQFSRLFF+PLPS+SVS PARGFRTLA+FKS+ KVP KKVVKPKEKVEDGIFGTSGGIGFTKQNELFVGRV
Subjt:  MLLSSGVCAGHGVGVKREIASLTQRLRPNAQFSRLFFHPLPSNSVSSPARGFRTLAVFKSRTKVPTKKVVKPKEKVEDGIFGTSGGIGFTKQNELFVGRV

Query:  AMIGFAASLLGEGITGKGILAQLNLETGVPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLDRAVIPPGKGFRSALGLKEGGPLFGFTKANE
        AMIGFAASLLGEGITGKGILAQLNLETGVPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGL+RAVIPPGKG RSALGLKEGGPLFGFTKANE
Subjt:  AMIGFAASLLGEGITGKGILAQLNLETGVPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLDRAVIPPGKGFRSALGLKEGGPLFGFTKANE

Query:  LFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVVFFFIAAVNPGTGKFVTDEEDD
        LFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNV+FFFIAAVNPGTGKFVTDEE+D
Subjt:  LFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVVFFFIAAVNPGTGKFVTDEEDD

XP_004150442.1 photosystem II 22 kDa protein, chloroplastic [Cucumis sativus]1.1e-13189.89Show/hide
Query:  MAAQTMLLSSGVCAGHGVGVKREIASLTQRLRPN-AQFSRLFFHPLPSNSVSSPARGFRTLAVFKSRTKVPTKKVVKPKEKVEDGIFGTSGGIGFTKQNE
        MAAQTMLL+SGVC GHGV +KRE++     LRPN  QF+RLFF+PLPS+SVS P RGF TLAVFKSRTK P KKV KPK+KVEDGIFGTSGGIGFTKQNE
Subjt:  MAAQTMLLSSGVCAGHGVGVKREIASLTQRLRPN-AQFSRLFFHPLPSNSVSSPARGFRTLAVFKSRTKVPTKKVVKPKEKVEDGIFGTSGGIGFTKQNE

Query:  LFVGRVAMIGFAASLLGEGITGKGILAQLNLETGVPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLDRAVIPPGKGFRSALGLKEGGPLFG
        LFVGRVAMIGFAAS+LGE ITGKGILAQLNLETG+PIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGL+RAVIPPGK FRSALGLKEGGPLFG
Subjt:  LFVGRVAMIGFAASLLGEGITGKGILAQLNLETGVPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLDRAVIPPGKGFRSALGLKEGGPLFG

Query:  FTKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVVFFFIAAVNPGTGKFVTDEEDDE
        FTKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVVFFFIAAVNPGTGKFVTDEEDDE
Subjt:  FTKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVVFFFIAAVNPGTGKFVTDEEDDE

XP_022952982.1 photosystem II 22 kDa protein, chloroplastic-like [Cucurbita moschata]9.9e-14194.55Show/hide
Query:  MAAQTMLLSSGVCAGHGVGVKREIASLTQRLRPNAQFSRLFFHPLPSNSVSSPARGFRTLAVFKSRTKVPTKKVVKPKEKVEDGIFGTSGGIGFTKQNEL
        MAAQTM+LSSGVCA HGV +KREIASLTQRLRPNAQFSRLFF+PLPS+SVS PARGFRTLA+FKS+ KVP KKVVKPKEKVEDGIFGTSGGIGFTKQNEL
Subjt:  MAAQTMLLSSGVCAGHGVGVKREIASLTQRLRPNAQFSRLFFHPLPSNSVSSPARGFRTLAVFKSRTKVPTKKVVKPKEKVEDGIFGTSGGIGFTKQNEL

Query:  FVGRVAMIGFAASLLGEGITGKGILAQLNLETGVPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLDRAVIPPGKGFRSALGLKEGGPLFGF
        FVGRVAMIGFAASLLGEGITGKGILAQLNLETGVPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGL+RAVIPPGKG RSALGLKEGGPLFGF
Subjt:  FVGRVAMIGFAASLLGEGITGKGILAQLNLETGVPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLDRAVIPPGKGFRSALGLKEGGPLFGF

Query:  TKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVVFFFIAAVNPGTGKFVTDEEDD
        TKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNV+FFFIAAVNPGTGKFVTDEE+D
Subjt:  TKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVVFFFIAAVNPGTGKFVTDEEDD

XP_022991058.1 photosystem II 22 kDa protein, chloroplastic-like [Cucurbita maxima]2.4e-13993.82Show/hide
Query:  MAAQTMLLSSGVCAGHGVGVKREIASLTQRLRPNAQFSRLFFHPLPSNSVSSPARGFRTLAVFKSRTKVPTKKVVKPKEKVEDGIFGTSGGIGFTKQNEL
        MAAQTM+LSSGVCA HGV +KREIASLT+RLRPNAQ SRLFF+PLPS+SVS PARGFRTLA+FKS+ KVP KKVVKPKEKVEDGIFGTSGGIGFTKQNEL
Subjt:  MAAQTMLLSSGVCAGHGVGVKREIASLTQRLRPNAQFSRLFFHPLPSNSVSSPARGFRTLAVFKSRTKVPTKKVVKPKEKVEDGIFGTSGGIGFTKQNEL

Query:  FVGRVAMIGFAASLLGEGITGKGILAQLNLETGVPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLDRAVIPPGKGFRSALGLKEGGPLFGF
        FVGRVAMIGFAASLLGEGITGKGILAQLNLETGVPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGL+RAVIPPGKG RSALGLKEGGPLFGF
Subjt:  FVGRVAMIGFAASLLGEGITGKGILAQLNLETGVPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLDRAVIPPGKGFRSALGLKEGGPLFGF

Query:  TKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVVFFFIAAVNPGTGKFVTDEEDD
        TKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNV+FFFIAAVNPGTGKFVTDEE+D
Subjt:  TKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVVFFFIAAVNPGTGKFVTDEEDD

XP_038885143.1 photosystem II 22 kDa protein, chloroplastic [Benincasa hispida]1.1e-13693.12Show/hide
Query:  MAAQTMLLSSGVCAGHGVGVKREIASLTQRLRPNAQFSRLFFHPLPSNSVSSPARGFRTLAVFKSRTKVPTKKVVKPKEKVEDGIFGTSGGIGFTKQNEL
        MAAQTMLL+SGVC GHGVGVKRE+     RLRPNAQFSRLFF+PLPS+SVS PARGF TLAVFKSRTK P KKV KPK+KVEDGIFGTSGGIGFTKQNEL
Subjt:  MAAQTMLLSSGVCAGHGVGVKREIASLTQRLRPNAQFSRLFFHPLPSNSVSSPARGFRTLAVFKSRTKVPTKKVVKPKEKVEDGIFGTSGGIGFTKQNEL

Query:  FVGRVAMIGFAASLLGEGITGKGILAQLNLETGVPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLDRAVIPPGKGFRSALGLKEGGPLFGF
        FVGRVAMIGFAASLLGE ITGKGILAQLNLETGVPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGL+RAVIPPGK FRSALGLKEGGPLFGF
Subjt:  FVGRVAMIGFAASLLGEGITGKGILAQLNLETGVPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLDRAVIPPGKGFRSALGLKEGGPLFGF

Query:  TKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVVFFFIAAVNPGTGKFVTDEEDDE
        TKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVVFFFIAAVNPGTGKFVTDEEDDE
Subjt:  TKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVVFFFIAAVNPGTGKFVTDEEDDE

TrEMBL top hitse value%identityAlignment
A0A0A0K7N4 Photosystem II protein5.3e-13289.89Show/hide
Query:  MAAQTMLLSSGVCAGHGVGVKREIASLTQRLRPN-AQFSRLFFHPLPSNSVSSPARGFRTLAVFKSRTKVPTKKVVKPKEKVEDGIFGTSGGIGFTKQNE
        MAAQTMLL+SGVC GHGV +KRE++     LRPN  QF+RLFF+PLPS+SVS P RGF TLAVFKSRTK P KKV KPK+KVEDGIFGTSGGIGFTKQNE
Subjt:  MAAQTMLLSSGVCAGHGVGVKREIASLTQRLRPN-AQFSRLFFHPLPSNSVSSPARGFRTLAVFKSRTKVPTKKVVKPKEKVEDGIFGTSGGIGFTKQNE

Query:  LFVGRVAMIGFAASLLGEGITGKGILAQLNLETGVPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLDRAVIPPGKGFRSALGLKEGGPLFG
        LFVGRVAMIGFAAS+LGE ITGKGILAQLNLETG+PIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGL+RAVIPPGK FRSALGLKEGGPLFG
Subjt:  LFVGRVAMIGFAASLLGEGITGKGILAQLNLETGVPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLDRAVIPPGKGFRSALGLKEGGPLFG

Query:  FTKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVVFFFIAAVNPGTGKFVTDEEDDE
        FTKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVVFFFIAAVNPGTGKFVTDEEDDE
Subjt:  FTKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVVFFFIAAVNPGTGKFVTDEEDDE

A0A1S3CS23 photosystem II 22 kDa protein, chloroplastic1.5e-13189.89Show/hide
Query:  MAAQTMLLSSGVCAGHGVGVKREIASLTQRLRP-NAQFSRLFFHPLPSNSVSSPARGFRTLAVFKSRTKVPTKKVVKPKEKVEDGIFGTSGGIGFTKQNE
        MAAQTMLL+SGVC GHGV +KRE++     LRP N QF+RLFF+PLP++SVS PARGF  LAVFKSRTK P KKV KPK+KVEDGIFGTSGGIGFTKQNE
Subjt:  MAAQTMLLSSGVCAGHGVGVKREIASLTQRLRP-NAQFSRLFFHPLPSNSVSSPARGFRTLAVFKSRTKVPTKKVVKPKEKVEDGIFGTSGGIGFTKQNE

Query:  LFVGRVAMIGFAASLLGEGITGKGILAQLNLETGVPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLDRAVIPPGKGFRSALGLKEGGPLFG
        LFVGRVAMIGFAASLLGE ITGKGILAQLNLETG+PIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGL+RAVIPPGK FRSALGLKEGGPLFG
Subjt:  LFVGRVAMIGFAASLLGEGITGKGILAQLNLETGVPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLDRAVIPPGKGFRSALGLKEGGPLFG

Query:  FTKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVVFFFIAAVNPGTGKFVTDEEDDE
        FTKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVVFFFIAAVNPGTGKFVTDEEDDE
Subjt:  FTKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVVFFFIAAVNPGTGKFVTDEEDDE

A0A5A7UZ08 Photosystem II 22 kDa protein1.5e-13189.89Show/hide
Query:  MAAQTMLLSSGVCAGHGVGVKREIASLTQRLRP-NAQFSRLFFHPLPSNSVSSPARGFRTLAVFKSRTKVPTKKVVKPKEKVEDGIFGTSGGIGFTKQNE
        MAAQTMLL+SGVC GHGV +KRE++     LRP N QF+RLFF+PLP++SVS PARGF  LAVFKSRTK P KKV KPK+KVEDGIFGTSGGIGFTKQNE
Subjt:  MAAQTMLLSSGVCAGHGVGVKREIASLTQRLRP-NAQFSRLFFHPLPSNSVSSPARGFRTLAVFKSRTKVPTKKVVKPKEKVEDGIFGTSGGIGFTKQNE

Query:  LFVGRVAMIGFAASLLGEGITGKGILAQLNLETGVPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLDRAVIPPGKGFRSALGLKEGGPLFG
        LFVGRVAMIGFAASLLGE ITGKGILAQLNLETG+PIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGL+RAVIPPGK FRSALGLKEGGPLFG
Subjt:  LFVGRVAMIGFAASLLGEGITGKGILAQLNLETGVPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLDRAVIPPGKGFRSALGLKEGGPLFG

Query:  FTKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVVFFFIAAVNPGTGKFVTDEEDDE
        FTKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVVFFFIAAVNPGTGKFVTDEEDDE
Subjt:  FTKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVVFFFIAAVNPGTGKFVTDEEDDE

A0A6J1GLX6 photosystem II 22 kDa protein, chloroplastic-like4.8e-14194.55Show/hide
Query:  MAAQTMLLSSGVCAGHGVGVKREIASLTQRLRPNAQFSRLFFHPLPSNSVSSPARGFRTLAVFKSRTKVPTKKVVKPKEKVEDGIFGTSGGIGFTKQNEL
        MAAQTM+LSSGVCA HGV +KREIASLTQRLRPNAQFSRLFF+PLPS+SVS PARGFRTLA+FKS+ KVP KKVVKPKEKVEDGIFGTSGGIGFTKQNEL
Subjt:  MAAQTMLLSSGVCAGHGVGVKREIASLTQRLRPNAQFSRLFFHPLPSNSVSSPARGFRTLAVFKSRTKVPTKKVVKPKEKVEDGIFGTSGGIGFTKQNEL

Query:  FVGRVAMIGFAASLLGEGITGKGILAQLNLETGVPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLDRAVIPPGKGFRSALGLKEGGPLFGF
        FVGRVAMIGFAASLLGEGITGKGILAQLNLETGVPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGL+RAVIPPGKG RSALGLKEGGPLFGF
Subjt:  FVGRVAMIGFAASLLGEGITGKGILAQLNLETGVPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLDRAVIPPGKGFRSALGLKEGGPLFGF

Query:  TKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVVFFFIAAVNPGTGKFVTDEEDD
        TKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNV+FFFIAAVNPGTGKFVTDEE+D
Subjt:  TKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVVFFFIAAVNPGTGKFVTDEEDD

A0A6J1JV31 photosystem II 22 kDa protein, chloroplastic-like1.2e-13993.82Show/hide
Query:  MAAQTMLLSSGVCAGHGVGVKREIASLTQRLRPNAQFSRLFFHPLPSNSVSSPARGFRTLAVFKSRTKVPTKKVVKPKEKVEDGIFGTSGGIGFTKQNEL
        MAAQTM+LSSGVCA HGV +KREIASLT+RLRPNAQ SRLFF+PLPS+SVS PARGFRTLA+FKS+ KVP KKVVKPKEKVEDGIFGTSGGIGFTKQNEL
Subjt:  MAAQTMLLSSGVCAGHGVGVKREIASLTQRLRPNAQFSRLFFHPLPSNSVSSPARGFRTLAVFKSRTKVPTKKVVKPKEKVEDGIFGTSGGIGFTKQNEL

Query:  FVGRVAMIGFAASLLGEGITGKGILAQLNLETGVPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLDRAVIPPGKGFRSALGLKEGGPLFGF
        FVGRVAMIGFAASLLGEGITGKGILAQLNLETGVPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGL+RAVIPPGKG RSALGLKEGGPLFGF
Subjt:  FVGRVAMIGFAASLLGEGITGKGILAQLNLETGVPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLDRAVIPPGKGFRSALGLKEGGPLFGF

Query:  TKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVVFFFIAAVNPGTGKFVTDEEDD
        TKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNV+FFFIAAVNPGTGKFVTDEE+D
Subjt:  TKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVVFFFIAAVNPGTGKFVTDEEDD

SwissProt top hitse value%identityAlignment
P54773 Photosystem II 22 kDa protein, chloroplastic3.7e-10673.67Show/hide
Query:  AQTMLLSSGVCAGHGVGVKREIASLTQRLRPNAQFSRLFFHPLP------SNSVSSPARGFRTLAVFKSRTKVPTKKVVKPKE--KVEDGIFGTSGGIGF
        AQTMLL++           R   SL +RL+P    S LF   LP      S + SS      T+A+FKS+ K P KKV  PKE  KVEDGIFGTSGGIGF
Subjt:  AQTMLLSSGVCAGHGVGVKREIASLTQRLRPNAQFSRLFFHPLP------SNSVSSPARGFRTLAVFKSRTKVPTKKVVKPKE--KVEDGIFGTSGGIGF

Query:  TKQNELFVGRVAMIGFAASLLGEGITGKGILAQLNLETGVPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLDRAVIPPGKGFRSALGLKEG
        TKQNELFVGRVAMIGFAASLLGE ITGKGILAQLNLETG+PIYEAEPLLLFFILF LLGAIGALGDRGKF+DDP P TGL++AVIPPGK F+SALGL EG
Subjt:  TKQNELFVGRVAMIGFAASLLGEGITGKGILAQLNLETGVPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLDRAVIPPGKGFRSALGLKEG

Query:  GPLFGFTKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVVFFFIAAVNPGTGKFVTDEEDD
        GPLFGFTKANELFVGRLAQLG AFS+IGEIITGKGALAQLN ETGVPINEIEPL+L N+ FFF AA+NPGTGKF+TDEE+D
Subjt:  GPLFGFTKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVVFFFIAAVNPGTGKFVTDEEDD

Q02060 Photosystem II 22 kDa protein, chloroplastic4.2e-11075.54Show/hide
Query:  MAAQTMLLSSGVCAGHGVGVKRE--IASLTQRLRPNAQFSRLFFHPLPSNSVSSPARGFRTLAVFKSRTKVPTKKVVKPKEKVEDGIFGTSGGIGFTKQN
        MA   +L+  GV   + + +KR   +    Q+++P +  S LFF PLPS+S SS +  F+TLA+FKS+ K P KKV KPK KVEDG+FGTSGGIGFTK+N
Subjt:  MAAQTMLLSSGVCAGHGVGVKRE--IASLTQRLRPNAQFSRLFFHPLPSNSVSSPARGFRTLAVFKSRTKVPTKKVVKPKEKVEDGIFGTSGGIGFTKQN

Query:  ELFVGRVAMIGFAASLLGEGITGKGILAQLNLETGVPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLDRAVIPPGKGFRSALGLKEGGPLF
        ELFVGRVAMIGFAASLLGEGITGKGIL+QLNLETG+PIYEAEPLLLFFILFTLLGAIGALGDRG+F+D  EP TGL++AVIPPGK  RSALGLK  GPLF
Subjt:  ELFVGRVAMIGFAASLLGEGITGKGILAQLNLETGVPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLDRAVIPPGKGFRSALGLKEGGPLF

Query:  GFTKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVVFFFIAAVNPGTGKFVTDEEDDE
        GFTK+NELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVVFFFIAA+NPGTGKF+TD+E+++
Subjt:  GFTKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVVFFFIAAVNPGTGKFVTDEEDDE

Q9FPP4 Photosystem II 22 kDa protein, chloroplastic4.8e-10673.67Show/hide
Query:  AQTMLLSSGVCAGHGVGVKREIASLTQRLRPNAQFSRLFFHPLP------SNSVSSPARGFRTLAVFKSRTKVPTKKVVKPKE--KVEDGIFGTSGGIGF
        AQTMLL++           R   SL +RL+P    S LF   LP      + + SS      T+A+FKS+ K P KKV  PKE  KVEDGIFGTSGGIGF
Subjt:  AQTMLLSSGVCAGHGVGVKREIASLTQRLRPNAQFSRLFFHPLP------SNSVSSPARGFRTLAVFKSRTKVPTKKVVKPKE--KVEDGIFGTSGGIGF

Query:  TKQNELFVGRVAMIGFAASLLGEGITGKGILAQLNLETGVPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLDRAVIPPGKGFRSALGLKEG
        TKQNELFVGRVAMIGFAASLLGE ITGKGILAQLNLETG+PIYEAEPLLLFFILF LLGAIGALGDRG+FIDDP PATGL++AVIPPGK F+SALGL EG
Subjt:  TKQNELFVGRVAMIGFAASLLGEGITGKGILAQLNLETGVPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLDRAVIPPGKGFRSALGLKEG

Query:  GPLFGFTKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVVFFFIAAVNPGTGKFVTDEEDD
        GPLFGFTKANELFVGRLAQLG AFS+IGEIITGKGALAQLN ETGVPINEIEPL+L N+ FFF AA+NPGTGKF+TDEE+D
Subjt:  GPLFGFTKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVVFFFIAAVNPGTGKFVTDEEDD

Q9SMB4 Photosystem II 22 kDa protein, chloroplastic1.3e-10675.36Show/hide
Query:  AQTMLLSSGVCAGHGVGVKREIASLTQRLRPNAQFSRLFFHP-----LPSNSVSSPAR-GFRTLAVFKSRTKVPTKKVV-KPKEKVEDGIFGTSGGIGFT
        AQTMLL++           R   SL +RL+P    S  FF P      PS S S+ +     T+A+FKS+ K P KKVV KPKEKVEDGIFGTSGGIGFT
Subjt:  AQTMLLSSGVCAGHGVGVKREIASLTQRLRPNAQFSRLFFHP-----LPSNSVSSPAR-GFRTLAVFKSRTKVPTKKVV-KPKEKVEDGIFGTSGGIGFT

Query:  KQNELFVGRVAMIGFAASLLGEGITGKGILAQLNLETGVPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLDRAVIPPGKGFRSALGLKEGG
        KQNELFVGRVAMIGFAASLLGE ITGKGILAQLNLETG+PIYEAEPLLLFFILF LLGAIGAL DRGKFIDDP P TGLD+AVIPPGKGF+SALGL EGG
Subjt:  KQNELFVGRVAMIGFAASLLGEGITGKGILAQLNLETGVPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLDRAVIPPGKGFRSALGLKEGG

Query:  PLFGFTKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVVFFFIAAVNPGTGKFVTDEEDD
        PLF FTKANELFVGRLAQLG AFS+IGEIITGKGALAQLN ETGVPINEIEPL+L N+VFFF+AA+NPGTGKFVTDEE++
Subjt:  PLFGFTKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVVFFFIAAVNPGTGKFVTDEEDD

Q9XF91 Photosystem II 22 kDa protein, chloroplastic8.5e-10373.26Show/hide
Query:  AQTMLLSSGVCAGHGVGVKREIASLTQRLRPNAQFSRLFFHPLPSNSVSSPARGFRTLAVFKSRTKVPTKKVVKPKEKVEDGIFGTSGGIGFTKQNELFV
        AQTMLL+SGV AGH +  K  +A          +   LF       ++ S  + F  LA+FK +TK   KKV KPK KVEDGIFGTSGGIGFTK NELFV
Subjt:  AQTMLLSSGVCAGHGVGVKREIASLTQRLRPNAQFSRLFFHPLPSNSVSSPARGFRTLAVFKSRTKVPTKKVVKPKEKVEDGIFGTSGGIGFTKQNELFV

Query:  GRVAMIGFAASLLGEGITGKGILAQLNLETGVPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLDRAVIPPGKGFRSALGLKEGGPLFGFTK
        GRVAMIGFAASLLGE +TGKGILAQLNLETG+PIYEAEPLLLFFILFTLLGAIGALGDRGKF+DD  P TGL++AVIPPGK  RSALGLKE GPLFGFTK
Subjt:  GRVAMIGFAASLLGEGITGKGILAQLNLETGVPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLDRAVIPPGKGFRSALGLKEGGPLFGFTK

Query:  ANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVVFFFIAAVNPGTGKFVTDEEDD
        ANELFVGRLAQLG AFSLIGEIITGKGALAQLNIETG+PI +IEPLVLLNV FFF AA+NPG GKF+TD+ ++
Subjt:  ANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVVFFFIAAVNPGTGKFVTDEEDD

Arabidopsis top hitse value%identityAlignment
AT1G44575.1 Chlorophyll A-B binding family protein6.0e-10473.26Show/hide
Query:  AQTMLLSSGVCAGHGVGVKREIASLTQRLRPNAQFSRLFFHPLPSNSVSSPARGFRTLAVFKSRTKVPTKKVVKPKEKVEDGIFGTSGGIGFTKQNELFV
        AQTMLL+SGV AGH +  K  +A          +   LF       ++ S  + F  LA+FK +TK   KKV KPK KVEDGIFGTSGGIGFTK NELFV
Subjt:  AQTMLLSSGVCAGHGVGVKREIASLTQRLRPNAQFSRLFFHPLPSNSVSSPARGFRTLAVFKSRTKVPTKKVVKPKEKVEDGIFGTSGGIGFTKQNELFV

Query:  GRVAMIGFAASLLGEGITGKGILAQLNLETGVPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLDRAVIPPGKGFRSALGLKEGGPLFGFTK
        GRVAMIGFAASLLGE +TGKGILAQLNLETG+PIYEAEPLLLFFILFTLLGAIGALGDRGKF+DD  P TGL++AVIPPGK  RSALGLKE GPLFGFTK
Subjt:  GRVAMIGFAASLLGEGITGKGILAQLNLETGVPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLDRAVIPPGKGFRSALGLKEGGPLFGFTK

Query:  ANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVVFFFIAAVNPGTGKFVTDEEDD
        ANELFVGRLAQLG AFSLIGEIITGKGALAQLNIETG+PI +IEPLVLLNV FFF AA+NPG GKF+TD+ ++
Subjt:  ANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVVFFFIAAVNPGTGKFVTDEEDD

AT1G44575.2 Chlorophyll A-B binding family protein2.3e-6368.91Show/hide
Query:  AQTMLLSSGVCAGHGVGVKREIASLTQRLRPNAQFSRLFFHPLPSNSVSSPARGFRTLAVFKSRTKVPTKKVVKPKEKVEDGIFGTSGGIGFTKQNELFV
        AQTMLL+SGV AGH +  K  +A          +   LF       ++ S  + F  LA+FK +TK   KKV KPK KVEDGIFGTSGGIGFTK NELFV
Subjt:  AQTMLLSSGVCAGHGVGVKREIASLTQRLRPNAQFSRLFFHPLPSNSVSSPARGFRTLAVFKSRTKVPTKKVVKPKEKVEDGIFGTSGGIGFTKQNELFV

Query:  GRVAMIGFAASLLGEGITGKGILAQLNLETGVPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLDRAVIPPGKGFRSALGLKEGG
        GRVAMIGFAASLLGE +TGKGILAQLNLETG+PIYEAEPLLLFFILFTLLGAIGALGDRGKF+DD  P TGL++AVIPPGK  RSALGLKE G
Subjt:  GRVAMIGFAASLLGEGITGKGILAQLNLETGVPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLDRAVIPPGKGFRSALGLKEGG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGCTCAAACCATGCTTCTTTCCTCCGGTGTGTGCGCCGGCCACGGCGTCGGCGTGAAGAGAGAAATCGCTTCGTTAACGCAGAGGCTTAGACCTAACGCTCAATT
TAGTCGTTTGTTTTTCCATCCTTTGCCTTCGAATTCGGTTTCTTCGCCGGCGCGTGGATTTCGGACTCTTGCGGTTTTTAAATCGAGGACGAAAGTGCCGACGAAGAAGG
TTGTGAAGCCGAAGGAGAAGGTTGAAGACGGCATTTTCGGAACGTCTGGTGGCATTGGTTTCACTAAGCAGAATGAACTCTTTGTTGGCCGTGTCGCCATGATCGGCTTT
GCTGCGTCTTTGCTAGGAGAGGGAATCACCGGAAAGGGAATTCTAGCGCAACTGAATTTAGAAACTGGAGTTCCGATTTACGAGGCCGAGCCTCTTCTTCTGTTTTTCAT
CTTATTCACTCTTCTCGGAGCCATCGGAGCCCTAGGAGACCGTGGAAAATTCATCGACGATCCGGAACCAGCCACCGGACTGGATCGCGCCGTCATCCCTCCCGGAAAGG
GCTTCAGATCGGCGCTAGGTCTCAAAGAAGGAGGTCCGTTGTTTGGATTCACGAAGGCAAATGAACTGTTCGTCGGCAGATTGGCGCAGCTAGGGTTTGCGTTCTCGCTG
ATCGGAGAAATCATTACAGGAAAGGGAGCGTTGGCGCAGTTGAACATTGAGACGGGAGTGCCGATCAATGAAATTGAGCCTCTGGTTTTGTTGAATGTTGTGTTCTTCTT
CATTGCTGCAGTGAATCCTGGAACTGGTAAATTTGTGACGGACGAGGAAGATGATGAATGA
mRNA sequenceShow/hide mRNA sequence
GTTAAGGTTTAAGACAAAAACCAAAAGGAAAACCGTACTCACTCACCAATCCACCATCACAAAAATTAAACGACGACGTGTCACTTTATTCGCCGATCGTTAAAATCTCC
CACCCAAATCCACACGCACATCCCCTTCCACCATACACTCAAAATCCCTCTGTTTCTCAAATCCTTCTTCTTAAAAACCCATCGAAATCACTCCGCCATTTGCTAGAGCT
TTAACAATCTCCCTCTCCCCTGCATTAAATCCAGTCAAAAGCTTAGCATCCATGGCGGCTCAAACCATGCTTCTTTCCTCCGGTGTGTGCGCCGGCCACGGCGTCGGCGT
GAAGAGAGAAATCGCTTCGTTAACGCAGAGGCTTAGACCTAACGCTCAATTTAGTCGTTTGTTTTTCCATCCTTTGCCTTCGAATTCGGTTTCTTCGCCGGCGCGTGGAT
TTCGGACTCTTGCGGTTTTTAAATCGAGGACGAAAGTGCCGACGAAGAAGGTTGTGAAGCCGAAGGAGAAGGTTGAAGACGGCATTTTCGGAACGTCTGGTGGCATTGGT
TTCACTAAGCAGAATGAACTCTTTGTTGGCCGTGTCGCCATGATCGGCTTTGCTGCGTCTTTGCTAGGAGAGGGAATCACCGGAAAGGGAATTCTAGCGCAACTGAATTT
AGAAACTGGAGTTCCGATTTACGAGGCCGAGCCTCTTCTTCTGTTTTTCATCTTATTCACTCTTCTCGGAGCCATCGGAGCCCTAGGAGACCGTGGAAAATTCATCGACG
ATCCGGAACCAGCCACCGGACTGGATCGCGCCGTCATCCCTCCCGGAAAGGGCTTCAGATCGGCGCTAGGTCTCAAAGAAGGAGGTCCGTTGTTTGGATTCACGAAGGCA
AATGAACTGTTCGTCGGCAGATTGGCGCAGCTAGGGTTTGCGTTCTCGCTGATCGGAGAAATCATTACAGGAAAGGGAGCGTTGGCGCAGTTGAACATTGAGACGGGAGT
GCCGATCAATGAAATTGAGCCTCTGGTTTTGTTGAATGTTGTGTTCTTCTTCATTGCTGCAGTGAATCCTGGAACTGGTAAATTTGTGACGGACGAGGAAGATGATGAAT
GAACGGATCGACTCTACTTTAATTTCTCTGTACATGAACTTAGCAAATCCGCATATTTCGCTTCAAGCTTGTGCTATTGTAACGTATTTATTTTGGTTGAGCACCCAAAA
CAACGAAATCTATGGAACAAACTTTGGCTAGTGAATTGTAGGAAACATGAGTTCTTTTTTGCTTCTTT
Protein sequenceShow/hide protein sequence
MAAQTMLLSSGVCAGHGVGVKREIASLTQRLRPNAQFSRLFFHPLPSNSVSSPARGFRTLAVFKSRTKVPTKKVVKPKEKVEDGIFGTSGGIGFTKQNELFVGRVAMIGF
AASLLGEGITGKGILAQLNLETGVPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLDRAVIPPGKGFRSALGLKEGGPLFGFTKANELFVGRLAQLGFAFSL
IGEIITGKGALAQLNIETGVPINEIEPLVLLNVVFFFIAAVNPGTGKFVTDEEDDE