; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0016879 (gene) of Snake gourd v1 genome

Gene IDTan0016879
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionNuclear transcription factor Y subunit C
Genome locationLG02:91241927..91242474
RNA-Seq ExpressionTan0016879
SyntenyTan0016879
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0005634 - nucleus (cellular component)
GO:0046982 - protein heterodimerization activity (molecular function)
InterPro domainsIPR003958 - Transcription factor CBF/NF-Y/archaeal histone domain
IPR009072 - Histone-fold


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0064731.1 dr1-associated corepressor [Cucumis melo var. makuwa]3.9e-6190.71Show/hide
Query:  MAEEESGEAIRPEFPTGRVKKIMKIDKEVGKVNSEALFLVSCATELFLKLLAEKSAEVAAEKKRKTVKLEHIRIAVKRHRSISDFLLDSLPLPSQPSDAP
        M EEESGEAIRPEFPTGRVKKIMK+DK++GKVNSEALF+VSCATELFLKLLAEKSAEVAAEKKRKTVKLEHIR+AVKRHRSISDFLLDSLPLPSQPSDAP
Subjt:  MAEEESGEAIRPEFPTGRVKKIMKIDKEVGKVNSEALFLVSCATELFLKLLAEKSAEVAAEKKRKTVKLEHIRIAVKRHRSISDFLLDSLPLPSQPSDAP

Query:  AKDENRTRTVVDKAVPQGTRRIDDFFRPPAKTTSAETNES
        AKDENR R VVDK  P GTRRIDDFFR P KTTSAETNES
Subjt:  AKDENRTRTVVDKAVPQGTRRIDDFFRPPAKTTSAETNES

XP_008445504.1 PREDICTED: dr1-associated corepressor [Cucumis melo]1.9e-6090.71Show/hide
Query:  MAEEESGEAIRPEFPTGRVKKIMKIDKEVGKVNSEALFLVSCATELFLKLLAEKSAEVAAEKKRKTVKLEHIRIAVKRHRSISDFLLDSLPLPSQPSDAP
        M EEESGEAIRPEFPTGRVKKIMK+DK++GKVNSEALFLVSCATELFLKLLAEKSAEVAAEKKRKTVKLEHIR+AVKRHRSISDFLLDSLPLPSQPSDA 
Subjt:  MAEEESGEAIRPEFPTGRVKKIMKIDKEVGKVNSEALFLVSCATELFLKLLAEKSAEVAAEKKRKTVKLEHIRIAVKRHRSISDFLLDSLPLPSQPSDAP

Query:  AKDENRTRTVVDKAVPQGTRRIDDFFRPPAKTTSAETNES
        AKDENR R VVDK  P GTRRIDDFFR P KTTSAETNES
Subjt:  AKDENRTRTVVDKAVPQGTRRIDDFFRPPAKTTSAETNES

XP_022997291.1 DNA polymerase epsilon subunit C [Cucurbita maxima]5.7e-6088.57Show/hide
Query:  MAEEESGEAIRPEFPTGRVKKIMKIDKEVGKVNSEALFLVSCATELFLKLLAEKSAEVAAEKKRKTVKLEHIRIAVKRHRSISDFLLDSLPLPSQPSDAP
        MAEEE GEAIRPEFP GR+KKIMK+DK++GKVNSEALFLVSCATELFL+LLAEKSAEVAAEKKRKTVKLEHIRIAVKRH+SISDFLLDSLPLPSQPSDAP
Subjt:  MAEEESGEAIRPEFPTGRVKKIMKIDKEVGKVNSEALFLVSCATELFLKLLAEKSAEVAAEKKRKTVKLEHIRIAVKRHRSISDFLLDSLPLPSQPSDAP

Query:  AKDENRTRTVVDKAVPQGTRRIDDFFRPPAKTTSAETNES
        AKDENRTR VVDK  P+GTRRIDDFFR P KT SAETNE+
Subjt:  AKDENRTRTVVDKAVPQGTRRIDDFFRPPAKTTSAETNES

XP_023547243.1 putative transcription factor C16C4.22 [Cucurbita pepo subsp. pepo]1.3e-5987.86Show/hide
Query:  MAEEESGEAIRPEFPTGRVKKIMKIDKEVGKVNSEALFLVSCATELFLKLLAEKSAEVAAEKKRKTVKLEHIRIAVKRHRSISDFLLDSLPLPSQPSDAP
        MAE+ESGEAIRPEFP GR+KKIMK+DK++GKVNSEALFLVSCATELFL+LLAEKS+EVAAEKKRKTVKLEHIRIAVKRH+SISDFLLDSLPLPSQPSDAP
Subjt:  MAEEESGEAIRPEFPTGRVKKIMKIDKEVGKVNSEALFLVSCATELFLKLLAEKSAEVAAEKKRKTVKLEHIRIAVKRHRSISDFLLDSLPLPSQPSDAP

Query:  AKDENRTRTVVDKAVPQGTRRIDDFFRPPAKTTSAETNES
        AKDENRTR VVDK  P+GTRRIDDFFR PAKT SAE NE+
Subjt:  AKDENRTRTVVDKAVPQGTRRIDDFFRPPAKTTSAETNES

XP_038884228.1 NCT transcriptional regulatory complex subunit A [Benincasa hispida]2.1e-6292.86Show/hide
Query:  MAEEESGEAIRPEFPTGRVKKIMKIDKEVGKVNSEALFLVSCATELFLKLLAEKSAEVAAEKKRKTVKLEHIRIAVKRHRSISDFLLDSLPLPSQPSDAP
        MAEEESG+AIRPEFPTGRVKKIMK+DK++ KVNSEALFLVSCATELFLKLLAEKSAEVAAEKKRKTVKLEHIRIAVKRHRSISDFLLDSLPLP QPSDAP
Subjt:  MAEEESGEAIRPEFPTGRVKKIMKIDKEVGKVNSEALFLVSCATELFLKLLAEKSAEVAAEKKRKTVKLEHIRIAVKRHRSISDFLLDSLPLPSQPSDAP

Query:  AKDENRTRTVVDKAVPQGTRRIDDFFRPPAKTTSAETNES
        AKDENRTRTVVDK VP+GTRRIDDFFR PAKTTSAE NES
Subjt:  AKDENRTRTVVDKAVPQGTRRIDDFFRPPAKTTSAETNES

TrEMBL top hitse value%identityAlignment
A0A1S3BDL4 dr1-associated corepressor9.4e-6190.71Show/hide
Query:  MAEEESGEAIRPEFPTGRVKKIMKIDKEVGKVNSEALFLVSCATELFLKLLAEKSAEVAAEKKRKTVKLEHIRIAVKRHRSISDFLLDSLPLPSQPSDAP
        M EEESGEAIRPEFPTGRVKKIMK+DK++GKVNSEALFLVSCATELFLKLLAEKSAEVAAEKKRKTVKLEHIR+AVKRHRSISDFLLDSLPLPSQPSDA 
Subjt:  MAEEESGEAIRPEFPTGRVKKIMKIDKEVGKVNSEALFLVSCATELFLKLLAEKSAEVAAEKKRKTVKLEHIRIAVKRHRSISDFLLDSLPLPSQPSDAP

Query:  AKDENRTRTVVDKAVPQGTRRIDDFFRPPAKTTSAETNES
        AKDENR R VVDK  P GTRRIDDFFR P KTTSAETNES
Subjt:  AKDENRTRTVVDKAVPQGTRRIDDFFRPPAKTTSAETNES

A0A5A7VG98 Dr1-associated corepressor1.9e-6190.71Show/hide
Query:  MAEEESGEAIRPEFPTGRVKKIMKIDKEVGKVNSEALFLVSCATELFLKLLAEKSAEVAAEKKRKTVKLEHIRIAVKRHRSISDFLLDSLPLPSQPSDAP
        M EEESGEAIRPEFPTGRVKKIMK+DK++GKVNSEALF+VSCATELFLKLLAEKSAEVAAEKKRKTVKLEHIR+AVKRHRSISDFLLDSLPLPSQPSDAP
Subjt:  MAEEESGEAIRPEFPTGRVKKIMKIDKEVGKVNSEALFLVSCATELFLKLLAEKSAEVAAEKKRKTVKLEHIRIAVKRHRSISDFLLDSLPLPSQPSDAP

Query:  AKDENRTRTVVDKAVPQGTRRIDDFFRPPAKTTSAETNES
        AKDENR R VVDK  P GTRRIDDFFR P KTTSAETNES
Subjt:  AKDENRTRTVVDKAVPQGTRRIDDFFRPPAKTTSAETNES

A0A6J1BRI3 nuclear transcription factor Y subunit C-15.2e-5988.57Show/hide
Query:  MAEEESGEAIRPEFPTGRVKKIMKIDKEVGKVNSEALFLVSCATELFLKLLAEKSAEVAAEKKRKTVKLEHIRIAVKRHRSISDFLLDSLPLPSQPSDAP
        MAEEESGEAIRPE PTGRVKKIMK+DK+V KVNSEALFLVSCAT+LFLKLLAEKSAEVA EKKRKTVKLEHIRIAVKRHR ISDFLLDSLPLP QPSDAP
Subjt:  MAEEESGEAIRPEFPTGRVKKIMKIDKEVGKVNSEALFLVSCATELFLKLLAEKSAEVAAEKKRKTVKLEHIRIAVKRHRSISDFLLDSLPLPSQPSDAP

Query:  AKDENRTRTVVDKAVPQGTRRIDDFFRPPAKTTSAETNES
        AK+ENRTRT  DKA P+GTRRIDDFFR PAKTTS E NES
Subjt:  AKDENRTRTVVDKAVPQGTRRIDDFFRPPAKTTSAETNES

A0A6J1HCT3 DNA polymerase epsilon subunit C1.8e-5987.14Show/hide
Query:  MAEEESGEAIRPEFPTGRVKKIMKIDKEVGKVNSEALFLVSCATELFLKLLAEKSAEVAAEKKRKTVKLEHIRIAVKRHRSISDFLLDSLPLPSQPSDAP
        MAEEE GEAIRPEFP GR+KKIMK+DK++GKVNSEALFLVSCATELFL+LLAEKS+EVAAEKKRKTVKLEHIRIAVKRH+SI DFLLDSLPLPSQPSDAP
Subjt:  MAEEESGEAIRPEFPTGRVKKIMKIDKEVGKVNSEALFLVSCATELFLKLLAEKSAEVAAEKKRKTVKLEHIRIAVKRHRSISDFLLDSLPLPSQPSDAP

Query:  AKDENRTRTVVDKAVPQGTRRIDDFFRPPAKTTSAETNES
        AKDENRTR VVDK  P+GTRRIDDFFR P KT SAETNE+
Subjt:  AKDENRTRTVVDKAVPQGTRRIDDFFRPPAKTTSAETNES

A0A6J1K737 DNA polymerase epsilon subunit C2.7e-6088.57Show/hide
Query:  MAEEESGEAIRPEFPTGRVKKIMKIDKEVGKVNSEALFLVSCATELFLKLLAEKSAEVAAEKKRKTVKLEHIRIAVKRHRSISDFLLDSLPLPSQPSDAP
        MAEEE GEAIRPEFP GR+KKIMK+DK++GKVNSEALFLVSCATELFL+LLAEKSAEVAAEKKRKTVKLEHIRIAVKRH+SISDFLLDSLPLPSQPSDAP
Subjt:  MAEEESGEAIRPEFPTGRVKKIMKIDKEVGKVNSEALFLVSCATELFLKLLAEKSAEVAAEKKRKTVKLEHIRIAVKRHRSISDFLLDSLPLPSQPSDAP

Query:  AKDENRTRTVVDKAVPQGTRRIDDFFRPPAKTTSAETNES
        AKDENRTR VVDK  P+GTRRIDDFFR P KT SAETNE+
Subjt:  AKDENRTRTVVDKAVPQGTRRIDDFFRPPAKTTSAETNES

SwissProt top hitse value%identityAlignment
B0XTT5 NCT transcriptional regulatory complex subunit A7.5e-0732.76Show/hide
Query:  IRPEFPTGRVKKIMKIDKEVGKVNSEALFLVSCATELFLKLLAEKSAEVAAEKKRKTVKLEHIRIAVKRHRSISDFLLDSL-PLPSQPSDAPAKDENRTR
        ++ +FP  R+K+IM+ D++VGKV       VS A ELF+  L  K+A+ A ++  K V   H++ AV +   + DFL D +  +P QP+     D++ + 
Subjt:  IRPEFPTGRVKKIMKIDKEVGKVNSEALFLVSCATELFLKLLAEKSAEVAAEKKRKTVKLEHIRIAVKRHRSISDFLLDSL-PLPSQPSDAPAKDENRTR

Query:  TVVDKAVPQGTRRIDD
                +G RR  D
Subjt:  TVVDKAVPQGTRRIDD

Q14919 Dr1-associated corepressor2.9e-0637.33Show/hide
Query:  FPTGRVKKIMKIDKEVGKVNSEALFLVSCATELFLKLLAEKSAEVAAEKKRKTVKLEHIRIAVKRHRSISDFLLD
        FP  R+KKIM+ D+E+GKV +    ++S A ELFL+ L +K+ +V   +  KT+   H++  ++  +   DFL D
Subjt:  FPTGRVKKIMKIDKEVGKVNSEALFLVSCATELFLKLLAEKSAEVAAEKKRKTVKLEHIRIAVKRHRSISDFLLD

Q2YDP3 Dr1-associated corepressor2.9e-0637.33Show/hide
Query:  FPTGRVKKIMKIDKEVGKVNSEALFLVSCATELFLKLLAEKSAEVAAEKKRKTVKLEHIRIAVKRHRSISDFLLD
        FP  R+KKIM+ D+E+GKV +    ++S A ELFL+ L +K+ +V   +  KT+   H++  ++  +   DFL D
Subjt:  FPTGRVKKIMKIDKEVGKVNSEALFLVSCATELFLKLLAEKSAEVAAEKKRKTVKLEHIRIAVKRHRSISDFLLD

Q4X095 NCT transcriptional regulatory complex subunit A7.5e-0732.76Show/hide
Query:  IRPEFPTGRVKKIMKIDKEVGKVNSEALFLVSCATELFLKLLAEKSAEVAAEKKRKTVKLEHIRIAVKRHRSISDFLLDSL-PLPSQPSDAPAKDENRTR
        ++ +FP  R+K+IM+ D++VGKV       VS A ELF+  L  K+A+ A ++  K V   H++ AV +   + DFL D +  +P QP+     D++ + 
Subjt:  IRPEFPTGRVKKIMKIDKEVGKVNSEALFLVSCATELFLKLLAEKSAEVAAEKKRKTVKLEHIRIAVKRHRSISDFLLDSL-PLPSQPSDAPAKDENRTR

Query:  TVVDKAVPQGTRRIDD
                +G RR  D
Subjt:  TVVDKAVPQGTRRIDD

Q54DA1 Dr1-associated corepressor homolog2.2e-0637.18Show/hide
Query:  RPEFPTGRVKKIMKIDKEVGKVNSEALFLVSCATELFLKLLAEKSAEVAAEKKRKTVKLEHIRIAVKRHRSISDFLLD
        + +FP  R+KKIM+ D+EVGK+ S    L+S   ELF+  L  K+ ++   KK K + + H++  +K+  S  DFL +
Subjt:  RPEFPTGRVKKIMKIDKEVGKVNSEALFLVSCATELFLKLLAEKSAEVAAEKKRKTVKLEHIRIAVKRHRSISDFLLD

Arabidopsis top hitse value%identityAlignment
AT1G07980.1 nuclear factor Y, subunit C105.9e-0730.77Show/hide
Query:  EEESG--EAIRPEFPTGRVKKIMKIDKEVGKVNSEALFLVSCATELFLKLLAEKSAEVAAEKKRKTVKLEHIRIAVKRHRSISDFLLDSLP
        EE+ G  E  + +FP  R+++IM+ D    ++  +A+FLV+ ATE+F++  +E++ + + + K+K +  +H+   V   +   +FL DS+P
Subjt:  EEESG--EAIRPEFPTGRVKKIMKIDKEVGKVNSEALFLVSCATELFLKLLAEKSAEVAAEKKRKTVKLEHIRIAVKRHRSISDFLLDSLP

AT3G12480.1 nuclear factor Y, subunit C111.2e-0741.1Show/hide
Query:  FPTGRVKKIMKIDKEVGKVNSEALFLVSCATELFLKLLAEKSAEVAAEKKRKTVKLEHIRIAVKRHRSISDFL
        FP  R+KKIM+ D++VGK+      LVS + ELFL+ L +++ E+  E+  KTV   H++  V+R+ ++ DFL
Subjt:  FPTGRVKKIMKIDKEVGKVNSEALFLVSCATELFLKLLAEKSAEVAAEKKRKTVKLEHIRIAVKRHRSISDFL

AT5G19490.1 Histone superfamily protein1.2e-0735.24Show/hide
Query:  IRPEFPTGRVKKIMKIDKEVGKVNSEALFLVSCATELFLKLLAEKSAEVAAEKKRKTVKLEHIRIAVKRHRSISDFLLDSLPLPSQPSDAPAKDENRT--
        ++  FP  R+KKIM+ D+EVGK+      LVS A ELFL+ L   + +V   +  KTV   H++  V+   ++ DFL D++        +  +D++ T  
Subjt:  IRPEFPTGRVKKIMKIDKEVGKVNSEALFLVSCATELFLKLLAEKSAEVAAEKKRKTVKLEHIRIAVKRHRSISDFLLDSLPLPSQPSDAPAKDENRT--

Query:  RTVVD
        R VVD
Subjt:  RTVVD

AT5G27910.1 nuclear factor Y, subunit C88.6e-0636.79Show/hide
Query:  EFPTGRVKKIMKIDKEVGKVNSEALFLVSCATELFLKLLAEKSAEVAAEKKRKTVKLEHIRIAVKRHRSISDFLLDSLPLPSQPSDAPAKDENRTRTVVD
        + P  R+KKIMK D +V  + SEA  L+S A E+F+  L  +S   A E KR T++  ++  AV +   I DFLLD      + S A A D      + D
Subjt:  EFPTGRVKKIMKIDKEVGKVNSEALFLVSCATELFLKLLAEKSAEVAAEKKRKTVKLEHIRIAVKRHRSISDFLLDSLPLPSQPSDAPAKDENRTRTVVD

Query:  KAVPQG
          +P G
Subjt:  KAVPQG

AT5G43250.1 nuclear factor Y, subunit C137.2e-3763.5Show/hide
Query:  EEESGEAIRPEFPTGRVKKIMKIDKEVGKVNSEALFLVSCATELFLKLLAEKSAEVAAEKKRKTVKLEHIRIAVKRHRSISDFLLDSLPLPSQPSDAPAK
        EEE G +IRPEFP GRVKKIMK+DK++ K+NSEAL +++ +TELFL  LAEKSA V AEKKRKTV L+H+RIAVKRH+  SDFLLDSLPLP+QP      
Subjt:  EEESGEAIRPEFPTGRVKKIMKIDKEVGKVNSEALFLVSCATELFLKLLAEKSAEVAAEKKRKTVKLEHIRIAVKRHRSISDFLLDSLPLPSQPSDAPAK

Query:  DENRTRTVVDKAVPQ---GTRRIDDFF-RPPAKTTSA
            T++V DK +P    GTRRIDDFF +  AKT SA
Subjt:  DENRTRTVVDKAVPQ---GTRRIDDFF-RPPAKTTSA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGAAGAAGAATCCGGAGAGGCTATCCGGCCGGAATTTCCGACGGGAAGAGTGAAGAAGATAATGAAGATCGATAAGGAGGTCGGCAAAGTGAACTCAGAAGCCCT
GTTTCTCGTCTCATGCGCCACCGAGCTCTTCCTCAAGCTTCTCGCTGAAAAATCTGCAGAAGTCGCCGCCGAGAAGAAACGGAAGACCGTGAAGCTCGAACACATCCGAA
TCGCCGTCAAAAGACATCGATCGATCAGTGATTTTCTCCTCGATTCGCTTCCTCTTCCGTCTCAGCCGTCGGATGCTCCGGCGAAGGACGAGAATCGCACTCGCACTGTT
GTTGATAAAGCGGTTCCTCAAGGAACCCGTCGAATCGATGATTTCTTTCGTCCGCCAGCAAAGACAACGTCGGCGGAGACCAACGAGTCCTAG
mRNA sequenceShow/hide mRNA sequence
CCCAGATTTCCATGATTCGATCAAATCGTCTGTGCTAAATCGAAAGCCATTTTCCAGCCGTTGAATTACTGCAGTTCATACAGATTCCGGACATGGCGGAAGAAGAATCC
GGAGAGGCTATCCGGCCGGAATTTCCGACGGGAAGAGTGAAGAAGATAATGAAGATCGATAAGGAGGTCGGCAAAGTGAACTCAGAAGCCCTGTTTCTCGTCTCATGCGC
CACCGAGCTCTTCCTCAAGCTTCTCGCTGAAAAATCTGCAGAAGTCGCCGCCGAGAAGAAACGGAAGACCGTGAAGCTCGAACACATCCGAATCGCCGTCAAAAGACATC
GATCGATCAGTGATTTTCTCCTCGATTCGCTTCCTCTTCCGTCTCAGCCGTCGGATGCTCCGGCGAAGGACGAGAATCGCACTCGCACTGTTGTTGATAAAGCGGTTCCT
CAAGGAACCCGTCGAATCGATGATTTCTTTCGTCCGCCAGCAAAGACAACGTCGGCGGAGACCAACGAGTCCTAGGCGCTCAATCTTCAACAGGCAAAAGCTCACAAG
Protein sequenceShow/hide protein sequence
MAEEESGEAIRPEFPTGRVKKIMKIDKEVGKVNSEALFLVSCATELFLKLLAEKSAEVAAEKKRKTVKLEHIRIAVKRHRSISDFLLDSLPLPSQPSDAPAKDENRTRTV
VDKAVPQGTRRIDDFFRPPAKTTSAETNES