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Tan0016881 (gene) of Snake gourd v1 genome

Gene IDTan0016881
OrganismTrichosanthes anguina (Snake gourd v1)
Descriptionglycine-rich cell wall structural protein 2-like
Genome locationLG09:67845945..67846691
RNA-Seq ExpressionTan0016881
SyntenyTan0016881
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6589747.1 hypothetical protein SDJN03_15170, partial [Cucurbita argyrosperma subsp. sororia]1.0e-2891.06Show/hide
Query:  MGSLKSLVLAAFLVSTLLVVSESRLARKDLGLDLGGVGIGIGAGIGIGLG--GSGSGSGSSSSSSSSSSSSSSSSGSGSDSGSEAGSYAGSRAGSGSGGR
        MGS KSL+LAA LVS+LLVVSESR+ARKDLGLDLGGVG+GIGAGIGIGLG  GSGSGSGSSSSSSSSSSSSSSSSGSGSDSGSEAGSYAGSRAGSGSG R
Subjt:  MGSLKSLVLAAFLVSTLLVVSESRLARKDLGLDLGGVGIGIGAGIGIGLG--GSGSGSGSSSSSSSSSSSSSSSSGSGSDSGSEAGSYAGSRAGSGSGGR

Query:  GGGGGGSGYGGGYGSGYGGGHGK
          GGGGSGYGGGYGSGYGGGHGK
Subjt:  GGGGGGSGYGGGYGSGYGGGHGK
XP_016899784.1 PREDICTED: glycine-rich cell wall structural protein 2-like [Cucumis melo]1.1e-2785.83Show/hide
Query:  MGSLKSLVLAAFLVSTLLVVSESRLARKDLGLDLGGVGIGIGAGIGIGLG------GSGSGSGSSSSSSSSSSSSSSSSGSGSDSGSEAGSYAGSRAGSG
        MGSLKSLVLAA LVS+  VVS+SR+ARKDLGLDLGGVGIG+G GIGIGLG      GSGSGSGS SSSSSSSSSSSSSSGSGS+SGSEAGSYAGSRAGSG
Subjt:  MGSLKSLVLAAFLVSTLLVVSESRLARKDLGLDLGGVGIGIGAGIGIGLG------GSGSGSGSSSSSSSSSSSSSSSSGSGSDSGSEAGSYAGSRAGSG

Query:  SGGRGGGGGGSGYGGGYGSGYGGGHGK
        S GRGG GGGSGYGGGYGSGYGGGHGK
Subjt:  SGGRGGGGGGSGYGGGYGSGYGGGHGK
XP_022921886.1 glycine-rich cell wall structural protein 2-like [Cucurbita moschata]4.5e-2988.98Show/hide
Query:  MGSLKSLVLAAFLVSTLLVVSESRLARKDLGLDLGGVGIGIGAGIGIGLG------GSGSGSGSSSSSSSSSSSSSSSSGSGSDSGSEAGSYAGSRAGSG
        MGS KSL+LAA LVS+LLVVSESR+ARKDLGLDLGGVG+GIGAGIGIGLG      GSGSGSGSSSSSSSSSSSSSSSSGSGSDSGSEAGSYAGSRAGSG
Subjt:  MGSLKSLVLAAFLVSTLLVVSESRLARKDLGLDLGGVGIGIGAGIGIGLG------GSGSGSGSSSSSSSSSSSSSSSSGSGSDSGSEAGSYAGSRAGSG

Query:  SGGRGGGGGGSGYGGGYGSGYGGGHGK
        SGGR  GGGGSGYGGGYGSGYGGGHGK
Subjt:  SGGRGGGGGGSGYGGGYGSGYGGGHGK
XP_022988598.1 glycine-rich cell wall structural protein 2-like [Cucurbita maxima]2.2e-2888.98Show/hide
Query:  MGSLKSLVLAAFLVSTLLVVSESRLARKDLGLDLGGVGIGIGAGIGIGLG------GSGSGSGSSSSSSSSSSSSSSSSGSGSDSGSEAGSYAGSRAGSG
        MG LKSLVLAA LVS+LLVVSESR+ARKDLGLDLGGVG+GIGAGIGIGLG      GSGSGSGSSSSSSSSSSSSSSSSGSGSDSGSEAGSYAGSRAGSG
Subjt:  MGSLKSLVLAAFLVSTLLVVSESRLARKDLGLDLGGVGIGIGAGIGIGLG------GSGSGSGSSSSSSSSSSSSSSSSGSGSDSGSEAGSYAGSRAGSG

Query:  SGGRGGGGGGSGYGGGYGSGYGGGHGK
        SG  G GGGGSGYGGGYGSGYGGGHGK
Subjt:  SGGRGGGGGGSGYGGGYGSGYGGGHGK
XP_023515822.1 counting factor 45-1-like [Cucurbita pepo subsp. pepo]2.6e-2990.4Show/hide
Query:  MGSLKSLVLAAFLVSTLLVVSESRLARKDLGLDLGGVGIGIGAGIGIGLG----GSGSGSGSSSSSSSSSSSSSSSSGSGSDSGSEAGSYAGSRAGSGSG
        MGS KSL+LAA LVS+LLVVSESR+ARKDLGLDLGGVG+GIGAGIGIGLG    GSGSGSGSSSSSSSSSSSSSSSSGSGSDSGSEAGSYAGSRAGSGSG
Subjt:  MGSLKSLVLAAFLVSTLLVVSESRLARKDLGLDLGGVGIGIGAGIGIGLG----GSGSGSGSSSSSSSSSSSSSSSSGSGSDSGSEAGSYAGSRAGSGSG

Query:  GRGGGGGGSGYGGGYGSGYGGGHGK
        GR  GGGGSGYGGGYGSGYGGGHGK
Subjt:  GRGGGGGGSGYGGGYGSGYGGGHGK
TrEMBL top hitse value%identityAlignment
A0A0A0LWP0 Uncharacterized protein5.9e-2785.38Show/hide
Query:  MGSLKSLVLAAFLVSTLLVV-SESRLARKDLGLDLGGVGIGIGAGIGIGLG--------GSGSGSGSSSSSSSSSSSSSSSSGSGSDSGSEAGSYAGSRA
        MGSLKSLVLAA LVS+L VV S+SR+ARKDLGLDLGGVGIG+GAG+GIGLG        GSGSGSGSSSSSSSSSSSSSSSSGSGSDSGSEAGSYAGSRA
Subjt:  MGSLKSLVLAAFLVSTLLVV-SESRLARKDLGLDLGGVGIGIGAGIGIGLG--------GSGSGSGSSSSSSSSSSSSSSSSGSGSDSGSEAGSYAGSRA

Query:  GSGSGGRGGGGGGSGYGGGYGSGYGGGHGK
        GSGSGGR  GG GSGYGGGYGSGYGGGHGK
Subjt:  GSGSGGRGGGGGGSGYGGGYGSGYGGGHGK
A0A1S4DUX4 glycine-rich cell wall structural protein 2-like5.3e-2885.83Show/hide
Query:  MGSLKSLVLAAFLVSTLLVVSESRLARKDLGLDLGGVGIGIGAGIGIGLG------GSGSGSGSSSSSSSSSSSSSSSSGSGSDSGSEAGSYAGSRAGSG
        MGSLKSLVLAA LVS+  VVS+SR+ARKDLGLDLGGVGIG+G GIGIGLG      GSGSGSGS SSSSSSSSSSSSSSGSGS+SGSEAGSYAGSRAGSG
Subjt:  MGSLKSLVLAAFLVSTLLVVSESRLARKDLGLDLGGVGIGIGAGIGIGLG------GSGSGSGSSSSSSSSSSSSSSSSGSGSDSGSEAGSYAGSRAGSG

Query:  SGGRGGGGGGSGYGGGYGSGYGGGHGK
        S GRGG GGGSGYGGGYGSGYGGGHGK
Subjt:  SGGRGGGGGGSGYGGGYGSGYGGGHGK
A0A5A7T0K2 Glycine-rich cell wall structural protein 2-like5.3e-2885.83Show/hide
Query:  MGSLKSLVLAAFLVSTLLVVSESRLARKDLGLDLGGVGIGIGAGIGIGLG------GSGSGSGSSSSSSSSSSSSSSSSGSGSDSGSEAGSYAGSRAGSG
        MGSLKSLVLAA LVS+  VVS+SR+ARKDLGLDLGGVGIG+G GIGIGLG      GSGSGSGS SSSSSSSSSSSSSSGSGS+SGSEAGSYAGSRAGSG
Subjt:  MGSLKSLVLAAFLVSTLLVVSESRLARKDLGLDLGGVGIGIGAGIGIGLG------GSGSGSGSSSSSSSSSSSSSSSSGSGSDSGSEAGSYAGSRAGSG

Query:  SGGRGGGGGGSGYGGGYGSGYGGGHGK
        S GRGG GGGSGYGGGYGSGYGGGHGK
Subjt:  SGGRGGGGGGSGYGGGYGSGYGGGHGK
A0A6J1E2L6 glycine-rich cell wall structural protein 2-like2.2e-2988.98Show/hide
Query:  MGSLKSLVLAAFLVSTLLVVSESRLARKDLGLDLGGVGIGIGAGIGIGLG------GSGSGSGSSSSSSSSSSSSSSSSGSGSDSGSEAGSYAGSRAGSG
        MGS KSL+LAA LVS+LLVVSESR+ARKDLGLDLGGVG+GIGAGIGIGLG      GSGSGSGSSSSSSSSSSSSSSSSGSGSDSGSEAGSYAGSRAGSG
Subjt:  MGSLKSLVLAAFLVSTLLVVSESRLARKDLGLDLGGVGIGIGAGIGIGLG------GSGSGSGSSSSSSSSSSSSSSSSGSGSDSGSEAGSYAGSRAGSG

Query:  SGGRGGGGGGSGYGGGYGSGYGGGHGK
        SGGR  GGGGSGYGGGYGSGYGGGHGK
Subjt:  SGGRGGGGGGSGYGGGYGSGYGGGHGK
A0A6J1JMR8 glycine-rich cell wall structural protein 2-like1.1e-2888.98Show/hide
Query:  MGSLKSLVLAAFLVSTLLVVSESRLARKDLGLDLGGVGIGIGAGIGIGLG------GSGSGSGSSSSSSSSSSSSSSSSGSGSDSGSEAGSYAGSRAGSG
        MG LKSLVLAA LVS+LLVVSESR+ARKDLGLDLGGVG+GIGAGIGIGLG      GSGSGSGSSSSSSSSSSSSSSSSGSGSDSGSEAGSYAGSRAGSG
Subjt:  MGSLKSLVLAAFLVSTLLVVSESRLARKDLGLDLGGVGIGIGAGIGIGLG------GSGSGSGSSSSSSSSSSSSSSSSGSGSDSGSEAGSYAGSRAGSG

Query:  SGGRGGGGGGSGYGGGYGSGYGGGHGK
        SG  G GGGGSGYGGGYGSGYGGGHGK
Subjt:  SGGRGGGGGGSGYGGGYGSGYGGGHGK
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G30450.1 glycine-rich protein2.7e-1668.37Show/hide
Query:  VLAAFLVSTLLVVSESRLARKDLGLDLGGVGIGIGAGIGIGLG---------GSGSGSGSSSSSSSSSSSSSSSSGSGSDSGSEAGSYAGSRAGSGSG
        +L   ++S+L++++ESRLARKDLG+DLGG+GIG+G G+GIGLG         GSGSGSGS SSSSSSSSSSSSSSGSG  +GS AGS+AGSRAGSGSG
Subjt:  VLAAFLVSTLLVVSESRLARKDLGLDLGGVGIGIGAGIGIGLG---------GSGSGSGSSSSSSSSSSSSSSSSGSGSDSGSEAGSYAGSRAGSGSG
AT4G30460.1 glycine-rich protein1.2e-1665.89Show/hide
Query:  MGSLKSLVLAAFLVSTLLVVSESRLARKDLGLDLGGVGIGIGAGIGIGLGGSGSGS---------GSSSSSSSSSSSSSSSSGSGSDSGSEAGSYAGSRA
        + +  SL+L   +++T ++VSESR+ARKDLGLDLGG+G GIG GIGIG GGSGSG+         GSSSSSSSSSSSSSSS G G D+GSEAGSYAGS A
Subjt:  MGSLKSLVLAAFLVSTLLVVSESRLARKDLGLDLGGVGIGIGAGIGIGLGGSGSGS---------GSSSSSSSSSSSSSSSSGSGSDSGSEAGSYAGSRA

Query:  GSGSGGRGGGGGGSGYGGGYGSGYGGGHG
        GSGSGGR G G G G GGG G G GGG G
Subjt:  GSGSGGRGGGGGGSGYGGGYGSGYGGGHG

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTAGTTTGAAATCCTTGGTTCTCGCTGCTTTTCTTGTTTCCACTCTTCTTGTGGTGTCCGAGAGCCGATTAGCCAGGAAAGATTTGGGCCTTGACCTGGGTGGGGT
GGGGATTGGGATTGGAGCTGGAATAGGCATTGGACTTGGTGGGAGTGGTTCTGGCTCTGGATCAAGTTCGAGTTCTAGTTCTAGTTCAAGCTCTAGCTCTTCTTCTTCTG
GGTCGGGTTCTGATTCTGGATCTGAAGCAGGCTCTTACGCCGGATCTCGAGCAGGTTCTGGCTCGGGTGGTCGTGGAGGTGGAGGTGGAGGTTCGGGGTATGGTGGAGGC
TACGGATCAGGTTATGGAGGAGGGCATGGAAAATGA
mRNA sequenceShow/hide mRNA sequence
GTGCCATTTCCAACATTTCTTTACCACTTCTTTTCATTTGTTGAGACTACTTTTTTCAAGTAATAATGGGTAGTTTGAAATCCTTGGTTCTCGCTGCTTTTCTTGTTTCC
ACTCTTCTTGTGGTGTCCGAGAGCCGATTAGCCAGGAAAGATTTGGGCCTTGACCTGGGTGGGGTGGGGATTGGGATTGGAGCTGGAATAGGCATTGGACTTGGTGGGAG
TGGTTCTGGCTCTGGATCAAGTTCGAGTTCTAGTTCTAGTTCAAGCTCTAGCTCTTCTTCTTCTGGGTCGGGTTCTGATTCTGGATCTGAAGCAGGCTCTTACGCCGGAT
CTCGAGCAGGTTCTGGCTCGGGTGGTCGTGGAGGTGGAGGTGGAGGTTCGGGGTATGGTGGAGGCTACGGATCAGGTTATGGAGGAGGGCATGGAAAATGAGATGCCAAT
TGATCTTCATTAACAAGCTGATATTAAAAATGGTTATGGCTGCTATGTAATGAATTAAATATCTAATAATAAAACTTGCTATAATTGATGAAACTCAAAAAAAAATTTGC
GACAATGGTTGATGTAGGTTTTCCAATTATGTATTGTATTGTATTTGCATTTCACAAATTAATTAATAGAAGCCTGTATCTCTAATAATTCTATCTATTTTCCAAGTTCC
CACGTTTTGCTATTTAAAGATAATAGTAGATATAATCAAGGCCAGTGCTTTCATCATTCAACAAATTTATAACAAGTTTAAATTATT
Protein sequenceShow/hide protein sequence
MGSLKSLVLAAFLVSTLLVVSESRLARKDLGLDLGGVGIGIGAGIGIGLGGSGSGSGSSSSSSSSSSSSSSSSGSGSDSGSEAGSYAGSRAGSGSGGRGGGGGGSGYGGG
YGSGYGGGHGK