; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0016898 (gene) of Snake gourd v1 genome

Gene IDTan0016898
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionCalmodulin
Genome locationLG02:85059494..85059961
RNA-Seq ExpressionTan0016898
SyntenyTan0016898
Gene Ontology termsGO:0005509 - calcium ion binding (molecular function)
InterPro domainsIPR002048 - EF-hand domain
IPR011992 - EF-hand domain pair
IPR018247 - EF-Hand 1, calcium-binding site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6585661.1 putative calcium-binding protein CML15, partial [Cucurbita argyrosperma subsp. sororia]1.2e-3178.26Show/hide
Query:  MGNSKSKTYKRVLVPFSEEQLAGIFKSYDRDGDGKLSKEELKQAFDYMGSRFSAFRADEALRAADVDGDGAITMAEMSKLITYTKSRKYTLC
        MGNSKSKTYKRVLVP SEEQL  IFKS+DRDGDGKLSKEELKQAF Y+GSRFSAFRA+EALR  D + DG ++M EM+KLI YTK RKYT+C
Subjt:  MGNSKSKTYKRVLVPFSEEQLAGIFKSYDRDGDGKLSKEELKQAFDYMGSRFSAFRADEALRAADVDGDGAITMAEMSKLITYTKSRKYTLC

KAG6585662.1 hypothetical protein SDJN03_18395, partial [Cucurbita argyrosperma subsp. sororia]7.6e-3786.96Show/hide
Query:  MGNSKSKTYKRVLVPFSEEQLAGIFKSYDRDGDGKLSKEELKQAFDYMGSRFSAFRADEALRAADVDGDGAITMAEMSKLITYTKSRKYTLC
        MGNSKSKTYKRVLVP +EEQLAGIFKS+DRDGDGKL+KEELKQAF+Y+GSRFS+FRADEALRAAD DGDG I MAEMSKLI YTK+RKYTLC
Subjt:  MGNSKSKTYKRVLVPFSEEQLAGIFKSYDRDGDGKLSKEELKQAFDYMGSRFSAFRADEALRAADVDGDGAITMAEMSKLITYTKSRKYTLC

KAG6598376.1 hypothetical protein SDJN03_08154, partial [Cucurbita argyrosperma subsp. sororia]9.2e-3582.61Show/hide
Query:  MGNSKSKTYKRVLVPFSEEQLAGIFKSYDRDGDGKLSKEELKQAFDYMGSRFSAFRADEALRAADVDGDGAITMAEMSKLITYTKSRKYTLC
        MGNSKSKTYKRVLVPFSEEQLA +FK++D DGDGKL+KEELKQAFDY+GSRFS+FR +EALRAAD DGDG I+MAEM KLI Y KSRKYTLC
Subjt:  MGNSKSKTYKRVLVPFSEEQLAGIFKSYDRDGDGKLSKEELKQAFDYMGSRFSAFRADEALRAADVDGDGAITMAEMSKLITYTKSRKYTLC

KAG7020569.1 hypothetical protein SDJN02_17255, partial [Cucurbita argyrosperma subsp. argyrosperma]1.9e-3279.35Show/hide
Query:  MGNSKSKTYKRVLVPFSEEQLAGIFKSYDRDGDGKLSKEELKQAFDYMGSRFSAFRADEALRAADVDGDGAITMAEMSKLITYTKSRKYTLC
        MGN+KS  YKRVLVPF+EEQLA IFKS+DRDGDGKLSKEELKQAF+Y+GSRFS+FR  EALRAAD +GDG I+M EM+KLI YTK RKYTLC
Subjt:  MGNSKSKTYKRVLVPFSEEQLAGIFKSYDRDGDGKLSKEELKQAFDYMGSRFSAFRADEALRAADVDGDGAITMAEMSKLITYTKSRKYTLC

KAG7029343.1 Calcium-binding protein CML37, partial [Cucurbita argyrosperma subsp. argyrosperma]4.1e-3582.61Show/hide
Query:  MGNSKSKTYKRVLVPFSEEQLAGIFKSYDRDGDGKLSKEELKQAFDYMGSRFSAFRADEALRAADVDGDGAITMAEMSKLITYTKSRKYTLC
        MGNSKSKTYKRVLVPFSEEQLA +FK++D DGDGKL+KEELKQAFDY+GSRFS+FR +EALRAAD+DGDG I+MAEM KLI Y KSRKYTLC
Subjt:  MGNSKSKTYKRVLVPFSEEQLAGIFKSYDRDGDGKLSKEELKQAFDYMGSRFSAFRADEALRAADVDGDGAITMAEMSKLITYTKSRKYTLC

TrEMBL top hitse value%identityAlignment
A0A0A0LRB6 Uncharacterized protein3.9e-3175.82Show/hide
Query:  MGNSKSKTYKRVLVPFSEEQLAGIFKSYDRDGDGKLSKEELKQAFDYMGSRFSAFRADEALRAADVDGDGAITMAEMSKLITYTKSRKYTL
        MGNSKSKTYKRVLVPFSEEQLA +FK++DRDGDG L+KEELKQAF+Y+GSRF  FR +EALRAAD +GDG I+M EM KLI Y K+RKYT+
Subjt:  MGNSKSKTYKRVLVPFSEEQLAGIFKSYDRDGDGKLSKEELKQAFDYMGSRFSAFRADEALRAADVDGDGAITMAEMSKLITYTKSRKYTL

A0A2N9FYQ0 Uncharacterized protein5.5e-1751.72Show/hide
Query:  KSKTYKRVLVPFSEEQLAGIFKSYDRDGDGKLSKEELKQAFDYMGSRFSAFRADEALRAADVDGDGAITMAEMSKLITYTKSRKYTL
        K  ++KR  +PF+EEQL  IFKS+D DGDGKLS++E+K+AF Y+GSR+ A+RA++A+  AD D DG I   E+ KL+ Y     YT+
Subjt:  KSKTYKRVLVPFSEEQLAGIFKSYDRDGDGKLSKEELKQAFDYMGSRFSAFRADEALRAADVDGDGAITMAEMSKLITYTKSRKYTL

A0A5A7V5B0 Putative Calcium-binding EF-hand family protein7.9e-3276.92Show/hide
Query:  MGNSKSKTYKRVLVPFSEEQLAGIFKSYDRDGDGKLSKEELKQAFDYMGSRFSAFRADEALRAADVDGDGAITMAEMSKLITYTKSRKYTL
        MGNSKSKTYKRVLVPFSEEQLA +FK++DRDGDG L+KEELKQAF+Y+GSRFS FR +EALRAAD +GDG I+M EM KLI Y K+RKYT+
Subjt:  MGNSKSKTYKRVLVPFSEEQLAGIFKSYDRDGDGKLSKEELKQAFDYMGSRFSAFRADEALRAADVDGDGAITMAEMSKLITYTKSRKYTL

A0A5A7VBH2 Calcium-binding EF-hand1.8e-1553.01Show/hide
Query:  YKRVLVPFSEEQLAGIFKSYDRDGDGKLSKEELKQAFDYMGSRFSAFRADEALRAADVDGDGAITMAEMSKLITYTKSRKYTL
        YKR  VPFS +QL  IF  +D DGDG+LS+ ELK AFD +GS +S FRA ++L+AAD DGDG +T+ E+  L+ Y   R+Y +
Subjt:  YKRVLVPFSEEQLAGIFKSYDRDGDGKLSKEELKQAFDYMGSRFSAFRADEALRAADVDGDGAITMAEMSKLITYTKSRKYTL

A0A7N2KRS3 Uncharacterized protein8.5e-1855.17Show/hide
Query:  KSKTYKRVLVPFSEEQLAGIFKSYDRDGDGKLSKEELKQAFDYMGSRFSAFRADEALRAADVDGDGAITMAEMSKLITYTKSRKYTL
        K+  +KR  VPF+E+QL  IFKS+D DGDGKLS++ELK AF Y+GSR+ A+R D+ALR AD + DG IT  E+ KL+ Y     YT+
Subjt:  KSKTYKRVLVPFSEEQLAGIFKSYDRDGDGKLSKEELKQAFDYMGSRFSAFRADEALRAADVDGDGAITMAEMSKLITYTKSRKYTL

SwissProt top hitse value%identityAlignment
A4UHC0 Calmodulin3.8e-0741.54Show/hide
Query:  SEEQLAGIFKSYDRDGDGKLSKEELKQAFDYMGSRFSAFRADEALRAADVDGDGAITMAEMSKLI
        +EE+L   FK +DRDG+G +S  EL+     +G + +    DE +R ADVDGDG I   E  K++
Subjt:  SEEQLAGIFKSYDRDGDGKLSKEELKQAFDYMGSRFSAFRADEALRAADVDGDGAITMAEMSKLI

P24044 Calmodulin1.0e-0740Show/hide
Query:  SEEQLAGIFKSYDRDGDGKLSKEELKQAFDYMGSRFSAFRADEALRAADVDGDGAITMAEMSKLI
        +EE+L   F+ +DRDGDG +S +EL+     +G + +    DE +R AD+DGDG I   E  K++
Subjt:  SEEQLAGIFKSYDRDGDGKLSKEELKQAFDYMGSRFSAFRADEALRAADVDGDGAITMAEMSKLI

P62184 Calmodulin1.7e-0737.88Show/hide
Query:  SEEQLAGIFKSYDRDGDGKLSKEELKQAFDYMGSRFSAFRADEALRAADVDGDGAITMAEMSKLIT
        SEE++   F+ +D+DGDG +S  EL+     +G + +    DE +R AD+DGDG +   E  K++T
Subjt:  SEEQLAGIFKSYDRDGDGKLSKEELKQAFDYMGSRFSAFRADEALRAADVDGDGAITMAEMSKLIT

P62203 Calmodulin1.0e-0740Show/hide
Query:  SEEQLAGIFKSYDRDGDGKLSKEELKQAFDYMGSRFSAFRADEALRAADVDGDGAITMAEMSKLI
        +EE+L   F+ +DRDGDG +S +EL+     +G + +    DE +R AD+DGDG I   E  K++
Subjt:  SEEQLAGIFKSYDRDGDGKLSKEELKQAFDYMGSRFSAFRADEALRAADVDGDGAITMAEMSKLI

P84339 Calmodulin3.8e-0740Show/hide
Query:  SEEQLAGIFKSYDRDGDGKLSKEELKQAFDYMGSRFSAFRADEALRAADVDGDGAITMAEMSKLI
        SEE++   FK +D+DG+G +S  EL+     +G + +    DE +R ADVDGDG I   E  K++
Subjt:  SEEQLAGIFKSYDRDGDGKLSKEELKQAFDYMGSRFSAFRADEALRAADVDGDGAITMAEMSKLI

Arabidopsis top hitse value%identityAlignment
AT1G18530.1 EF hand calcium-binding protein family3.9e-0739.71Show/hide
Query:  VPFSEEQLAGIFKSYDRDGDGKLSKEELKQAFDYMGSRFSAFRADEALRAADVDGDGAITMAEMSKLI
        V  + EQL  IFKS+DRDG+G +S  EL  A   MG   +     E ++ AD +GDG I+  E + ++
Subjt:  VPFSEEQLAGIFKSYDRDGDGKLSKEELKQAFDYMGSRFSAFRADEALRAADVDGDGAITMAEMSKLI

AT3G03000.1 EF hand calcium-binding protein family5.1e-0735.21Show/hide
Query:  VLVPFSEEQLAGIFKSYDRDGDGKLSKEELKQAFDYMGSRFSAFRADEALRAADVDGDGAITMAEMSKLIT
        V  P++++QL  IF+ +DRDG+G ++  EL  +   +G   +A      ++ AD DGDG I   E  + IT
Subjt:  VLVPFSEEQLAGIFKSYDRDGDGKLSKEELKQAFDYMGSRFSAFRADEALRAADVDGDGAITMAEMSKLIT

AT3G43810.1 calmodulin 76.6e-0738.46Show/hide
Query:  SEEQLAGIFKSYDRDGDGKLSKEELKQAFDYMGSRFSAFRADEALRAADVDGDGAITMAEMSKLI
        SEE+L   F+ +D+D +G +S  EL+     +G + +    DE +R ADVDGDG I   E  K++
Subjt:  SEEQLAGIFKSYDRDGDGKLSKEELKQAFDYMGSRFSAFRADEALRAADVDGDGAITMAEMSKLI

AT3G51920.1 calmodulin 93.5e-0838.46Show/hide
Query:  SEEQLAGIFKSYDRDGDGKLSKEELKQAFDYMGSRFSAFRADEALRAADVDGDGAITMAEMSKLI
        + ++L  +F+ +DRDGDG +S+ EL +    MG + +A  A+  +R AD+DGDG ++  E SK++
Subjt:  SEEQLAGIFKSYDRDGDGKLSKEELKQAFDYMGSRFSAFRADEALRAADVDGDGAITMAEMSKLI

AT5G21274.1 calmodulin 63.0e-0740Show/hide
Query:  SEEQLAGIFKSYDRDGDGKLSKEELKQAFDYMGSRFSAFRADEALRAADVDGDGAITMAEMSKLI
        SEE+L   F+ +D+D +G +S  EL+     +G + S    DE +R ADVDGDG I   E  K++
Subjt:  SEEQLAGIFKSYDRDGDGKLSKEELKQAFDYMGSRFSAFRADEALRAADVDGDGAITMAEMSKLI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGAATTCCAAAAGTAAAACTTACAAACGAGTCCTGGTTCCATTCTCAGAGGAGCAACTAGCTGGCATTTTCAAGAGCTATGACCGAGACGGCGACGGGAAACTGTC
GAAGGAGGAGTTGAAGCAAGCCTTCGACTATATGGGCTCACGCTTCAGCGCCTTCCGAGCCGATGAAGCCCTACGCGCCGCTGATGTCGACGGCGACGGCGCCATCACCA
TGGCCGAGATGAGCAAGCTTATTACATATACCAAAAGTCGTAAATATACTCTCTGTTGA
mRNA sequenceShow/hide mRNA sequence
CAAAATACCATTCCCTTTCTTCTTCTTCTTCTTCAATGGGGAATTCCAAAAGTAAAACTTACAAACGAGTCCTGGTTCCATTCTCAGAGGAGCAACTAGCTGGCATTTTC
AAGAGCTATGACCGAGACGGCGACGGGAAACTGTCGAAGGAGGAGTTGAAGCAAGCCTTCGACTATATGGGCTCACGCTTCAGCGCCTTCCGAGCCGATGAAGCCCTACG
CGCCGCTGATGTCGACGGCGACGGCGCCATCACCATGGCCGAGATGAGCAAGCTTATTACATATACCAAAAGTCGTAAATATACTCTCTGTTGAAAACTAGTACTTCTTG
TTTATGGGTTCGTGTGTATACATATCAATCAATGTGTATTTTATGAATAAAATTTGTTAGGTGGGGTTTGGAGTTTTTTTTTTTTTTTTTTTTAAAGTTATGGTCCAGTT
TGTTTAGACAGAATTTTGACAATAGTAT
Protein sequenceShow/hide protein sequence
MGNSKSKTYKRVLVPFSEEQLAGIFKSYDRDGDGKLSKEELKQAFDYMGSRFSAFRADEALRAADVDGDGAITMAEMSKLITYTKSRKYTLC