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Tan0016916 (gene) of Snake gourd v1 genome

Gene IDTan0016916
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionAuxin-responsive protein
Genome locationLG02:6750844..6751116
RNA-Seq ExpressionTan0016916
SyntenyTan0016916
Gene Ontology termsGO:0009733 - response to auxin (biological process)
InterPro domainsIPR003676 - Small auxin-up RNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8645660.1 hypothetical protein Csa_020551 [Cucumis sativus]1.3e-2876.19Show/hide
Query:  MGLRQLLKRSSMTGNRRVSTVPKGYCAVYVGENQKKRFVIPITYLNQPCLQDLLSQATEEFDYYHPMGGLTFHCRDDIFTNLIS
        MG+RQLLKR     N+ VST+PKGYCAVYVGENQKKRFVIPIT+LNQ C Q+LLSQ  E+F Y+HPMGGLT HCRDDIFT+LIS
Subjt:  MGLRQLLKRSSMTGNRRVSTVPKGYCAVYVGENQKKRFVIPITYLNQPCLQDLLSQATEEFDYYHPMGGLTFHCRDDIFTNLIS

KAE8645661.1 hypothetical protein Csa_020412 [Cucumis sativus]1.2e-3186.67Show/hide
Query:  RRVSTVPKGYCAVYVGENQKKRFVIPITYLNQPCLQDLLSQATEEFDYYHPMGGLTFHCRDDIFTNLISHLNEHL
        +RVS VPKGYCAVYVGENQKKRFVIPITYLNQPC QDLL+Q TEEF+YYHPMGGLTFHC DDIF +LISHLNE L
Subjt:  RRVSTVPKGYCAVYVGENQKKRFVIPITYLNQPCLQDLLSQATEEFDYYHPMGGLTFHCRDDIFTNLISHLNEHL

KAG6572089.1 Auxin-responsive protein SAUR23, partial [Cucurbita argyrosperma subsp. sororia]2.5e-2974.71Show/hide
Query:  MGLRQLLKRSSMTGNRRVSTVPKGYCAVYVGENQKKRFVIPITYLNQPCLQDLLSQATEEFDYYHPMGGLTFHCRDDIFTNLISHLN
        M L QLL+R S +    V+ VPKGYCAVYVGE QKKRFVIP+TYLNQPC QDLLSQA +EF YYHPMGGLT  CR+DIFTNLIS LN
Subjt:  MGLRQLLKRSSMTGNRRVSTVPKGYCAVYVGENQKKRFVIPITYLNQPCLQDLLSQATEEFDYYHPMGGLTFHCRDDIFTNLISHLN

KGN43209.1 hypothetical protein Csa_020258 [Cucumis sativus]9.7e-2974.71Show/hide
Query:  MGLRQLLKRSSMTGNRRVSTVPKGYCAVYVGENQKKRFVIPITYLNQPCLQDLLSQATEEFDYYHPMGGLTFHCRDDIFTNLISHLN
        M + QLL+R+S +    V+ VPKGYCAVYVGE QKKRFVIPITYLNQPC Q LLSQA EEF YYHPMGGLT  CR+DIFTNLIS LN
Subjt:  MGLRQLLKRSSMTGNRRVSTVPKGYCAVYVGENQKKRFVIPITYLNQPCLQDLLSQATEEFDYYHPMGGLTFHCRDDIFTNLISHLN

XP_022136192.1 auxin-responsive protein SAUR24-like [Momordica charantia]4.6e-3178.41Show/hide
Query:  MGLRQLLKRSSMTGNRRVSTVPKGYCAVYVGENQKKRFVIPITYLNQPCLQDLLSQATEEFDYYHPMGGLTFHCRDDIFTNLISHLNE
        MGLRQLLKR     N+ VS VPKGYCAVYVGE+QKKRFVIPI+YLNQPC Q+LL QA EEF YYHPMGGLT HCRDDIFT+LIS LN+
Subjt:  MGLRQLLKRSSMTGNRRVSTVPKGYCAVYVGENQKKRFVIPITYLNQPCLQDLLSQATEEFDYYHPMGGLTFHCRDDIFTNLISHLNE

TrEMBL top hitse value%identityAlignment
A0A0A0K2F9 Uncharacterized protein4.7e-2974.71Show/hide
Query:  MGLRQLLKRSSMTGNRRVSTVPKGYCAVYVGENQKKRFVIPITYLNQPCLQDLLSQATEEFDYYHPMGGLTFHCRDDIFTNLISHLN
        M + QLL+R+S +    V+ VPKGYCAVYVGE QKKRFVIPITYLNQPC Q LLSQA EEF YYHPMGGLT  CR+DIFTNLIS LN
Subjt:  MGLRQLLKRSSMTGNRRVSTVPKGYCAVYVGENQKKRFVIPITYLNQPCLQDLLSQATEEFDYYHPMGGLTFHCRDDIFTNLISHLN

A0A0A0K4K1 Uncharacterized protein1.4e-2872.73Show/hide
Query:  MGLRQLLKRSSMTGNRRVSTVPKGYCAVYVGENQKKRFVIPITYLNQPCLQDLLSQATEEFDYYHPMGGLTFHCRDDIFTNLISHLNE
        M L+ LLKR     N+ VS VPKGYCAVYVGE+QKKRFVIPITYLN+PC Q LL Q  EEF YYHPMGGLT HCRDDIFT+LIS++N+
Subjt:  MGLRQLLKRSSMTGNRRVSTVPKGYCAVYVGENQKKRFVIPITYLNQPCLQDLLSQATEEFDYYHPMGGLTFHCRDDIFTNLISHLNE

A0A0A0K5V1 Uncharacterized protein8.5e-3985.56Show/hide
Query:  MGLRQLLKRSSMTGNRRVSTVPKGYCAVYVGENQKKRFVIPITYLNQPCLQDLLSQATEEFDYYHPMGGLTFHCRDDIFTNLISHLNEHL
        MGLR+LL+RSSM GN+RVS VPKGYCAVYVGENQKKRFVIPITYLNQPC QDLL+Q TEEF+YYHPMGGLTFHC DDIF +LISHLNE L
Subjt:  MGLRQLLKRSSMTGNRRVSTVPKGYCAVYVGENQKKRFVIPITYLNQPCLQDLLSQATEEFDYYHPMGGLTFHCRDDIFTNLISHLNEHL

A0A5D3CL76 Auxin-induced protein 15A-like2.3e-2874.71Show/hide
Query:  MGLRQLLKRSSMTGNRRVSTVPKGYCAVYVGENQKKRFVIPITYLNQPCLQDLLSQATEEFDYYHPMGGLTFHCRDDIFTNLISHLN
        M + QLL+R+S  G   V+ VPKGYCAVYVGE QKKRFVIP+TYLNQPC Q LLSQA EEF YYHPMGGLT  CR+DIFTNLIS LN
Subjt:  MGLRQLLKRSSMTGNRRVSTVPKGYCAVYVGENQKKRFVIPITYLNQPCLQDLLSQATEEFDYYHPMGGLTFHCRDDIFTNLISHLN

A0A6J1C4W2 auxin-responsive protein SAUR24-like2.2e-3178.41Show/hide
Query:  MGLRQLLKRSSMTGNRRVSTVPKGYCAVYVGENQKKRFVIPITYLNQPCLQDLLSQATEEFDYYHPMGGLTFHCRDDIFTNLISHLNE
        MGLRQLLKR     N+ VS VPKGYCAVYVGE+QKKRFVIPI+YLNQPC Q+LL QA EEF YYHPMGGLT HCRDDIFT+LIS LN+
Subjt:  MGLRQLLKRSSMTGNRRVSTVPKGYCAVYVGENQKKRFVIPITYLNQPCLQDLLSQATEEFDYYHPMGGLTFHCRDDIFTNLISHLNE

SwissProt top hitse value%identityAlignment
P33079 Auxin-induced protein 10A52.5e-1955.7Show/hide
Query:  SSMTGNRRVSTVPKGYCAVYVGENQKKRFVIPITYLNQPCLQDLLSQATEEFDYYHPMGGLTFHCRDDIFTNLISHLNE
        ++   ++RV  VPKGY AVYVG+ + +RF IP++YLN+P  Q+LLSQA EEF Y HPMGGLT  C+++ F N+ +HLNE
Subjt:  SSMTGNRRVSTVPKGYCAVYVGENQKKRFVIPITYLNQPCLQDLLSQATEEFDYYHPMGGLTFHCRDDIFTNLISHLNE

P33080 Auxin-induced protein X10A2.5e-1952.94Show/hide
Query:  LKRSSMTGNRRVS---TVPKGYCAVYVGENQKKRFVIPITYLNQPCLQDLLSQATEEFDYYHPMGGLTFHCRDDIFTNLISHLNE
        ++++S+  N+  S    VPKGY  VYVG+ + +RF+IP++YLNQP  QDLL+QA EEF Y HPMGGLT  C++D F  + SHLN+
Subjt:  LKRSSMTGNRRVS---TVPKGYCAVYVGENQKKRFVIPITYLNQPCLQDLLSQATEEFDYYHPMGGLTFHCRDDIFTNLISHLNE

Q9FJF7 Auxin-responsive protein SAUR228.5e-2051.16Show/hide
Query:  MGLRQLLKRSSMTGNRRVSTVPKGYCAVYVGENQKKRFVIPITYLNQPCLQDLLSQATEEFDYYHPMGGLTFHCRDDIFTNLISHL
        +G +++L RS+      VS  PKG+ AVYVGE+QKKR+++P++YLNQP  Q LLS++ +EF + HPMGGLT  C +D F N+ S L
Subjt:  MGLRQLLKRSSMTGNRRVSTVPKGYCAVYVGENQKKRFVIPITYLNQPCLQDLLSQATEEFDYYHPMGGLTFHCRDDIFTNLISHL

Q9FJG1 Auxin-responsive protein SAUR191.1e-1951.16Show/hide
Query:  MGLRQLLKRSSMTGNRRVSTVPKGYCAVYVGENQKKRFVIPITYLNQPCLQDLLSQATEEFDYYHPMGGLTFHCRDDIFTNLISHL
        +G +++L RS+  G    S  PKG+ AVYVGE+QKKR+++P++YL+QP  Q LLS++ EEF + HPMGGLT  C +D F N+ S L
Subjt:  MGLRQLLKRSSMTGNRRVSTVPKGYCAVYVGENQKKRFVIPITYLNQPCLQDLLSQATEEFDYYHPMGGLTFHCRDDIFTNLISHL

Q9FK62 Auxin-responsive protein SAUR245.0e-2052.33Show/hide
Query:  MGLRQLLKRSSMTGNRRVSTVPKGYCAVYVGENQKKRFVIPITYLNQPCLQDLLSQATEEFDYYHPMGGLTFHCRDDIFTNLISHL
        +G +++L RS+  G    S  PKG+ AVYVGE+QKKR+++P++YLNQP  Q LLS++ EEF + HPMGGLT  C +D F N+ S L
Subjt:  MGLRQLLKRSSMTGNRRVSTVPKGYCAVYVGENQKKRFVIPITYLNQPCLQDLLSQATEEFDYYHPMGGLTFHCRDDIFTNLISHL

Arabidopsis top hitse value%identityAlignment
AT4G38840.1 SAUR-like auxin-responsive protein family3.0e-2050.57Show/hide
Query:  RQLLKRSSMTGNRRVST---VPKGYCAVYVGENQKKRFVIPITYLNQPCLQDLLSQATEEFDYYHPMGGLTFHCRDDIFTNLISHLN
        +Q+L+++ +  +   S+   VPKGY AVYVGE   KRFV+P++YL+QP  QDLL +A EEF + HPMGGLT  C ++IF +L S  N
Subjt:  RQLLKRSSMTGNRRVST---VPKGYCAVYVGENQKKRFVIPITYLNQPCLQDLLSQATEEFDYYHPMGGLTFHCRDDIFTNLISHLN

AT5G18010.1 SAUR-like auxin-responsive protein family7.9e-2151.16Show/hide
Query:  MGLRQLLKRSSMTGNRRVSTVPKGYCAVYVGENQKKRFVIPITYLNQPCLQDLLSQATEEFDYYHPMGGLTFHCRDDIFTNLISHL
        +G +++L RS+  G    S  PKG+ AVYVGE+QKKR+++P++YL+QP  Q LLS++ EEF + HPMGGLT  C +D F N+ S L
Subjt:  MGLRQLLKRSSMTGNRRVSTVPKGYCAVYVGENQKKRFVIPITYLNQPCLQDLLSQATEEFDYYHPMGGLTFHCRDDIFTNLISHL

AT5G18020.1 SAUR-like auxin-responsive protein family1.8e-2052.38Show/hide
Query:  MGLRQLLKRSSMTGNRRVSTVPKGYCAVYVGENQKKRFVIPITYLNQPCLQDLLSQATEEFDYYHPMGGLTFHCRDDIFTNLIS
        +G +++L RS+       S  PKG+ AVYVGE+QKKR+++PI+YLNQP  Q LLS++ EEF + HPMGGLT  C +D F N+ S
Subjt:  MGLRQLLKRSSMTGNRRVSTVPKGYCAVYVGENQKKRFVIPITYLNQPCLQDLLSQATEEFDYYHPMGGLTFHCRDDIFTNLIS

AT5G18050.1 SAUR-like auxin-responsive protein family6.1e-2151.16Show/hide
Query:  MGLRQLLKRSSMTGNRRVSTVPKGYCAVYVGENQKKRFVIPITYLNQPCLQDLLSQATEEFDYYHPMGGLTFHCRDDIFTNLISHL
        +G +++L RS+      VS  PKG+ AVYVGE+QKKR+++P++YLNQP  Q LLS++ +EF + HPMGGLT  C +D F N+ S L
Subjt:  MGLRQLLKRSSMTGNRRVSTVPKGYCAVYVGENQKKRFVIPITYLNQPCLQDLLSQATEEFDYYHPMGGLTFHCRDDIFTNLISHL

AT5G18080.1 SAUR-like auxin-responsive protein family3.6e-2152.33Show/hide
Query:  MGLRQLLKRSSMTGNRRVSTVPKGYCAVYVGENQKKRFVIPITYLNQPCLQDLLSQATEEFDYYHPMGGLTFHCRDDIFTNLISHL
        +G +++L RS+  G    S  PKG+ AVYVGE+QKKR+++P++YLNQP  Q LLS++ EEF + HPMGGLT  C +D F N+ S L
Subjt:  MGLRQLLKRSSMTGNRRVSTVPKGYCAVYVGENQKKRFVIPITYLNQPCLQDLLSQATEEFDYYHPMGGLTFHCRDDIFTNLISHL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGACTTCGTCAACTTCTCAAGCGATCTTCAATGACAGGAAACCGGAGAGTTTCAACCGTTCCCAAGGGCTATTGTGCAGTCTATGTTGGTGAGAACCAAAAGAAGCG
GTTTGTGATTCCAATTACGTACTTGAATCAGCCATGTCTTCAAGACTTGCTTAGTCAAGCTACCGAAGAATTCGATTATTATCATCCAATGGGTGGTCTCACATTTCACT
GCAGAGATGACATCTTCACTAATCTGATCTCTCACTTGAATGAACATCTATGA
mRNA sequenceShow/hide mRNA sequence
ATGGGACTTCGTCAACTTCTCAAGCGATCTTCAATGACAGGAAACCGGAGAGTTTCAACCGTTCCCAAGGGCTATTGTGCAGTCTATGTTGGTGAGAACCAAAAGAAGCG
GTTTGTGATTCCAATTACGTACTTGAATCAGCCATGTCTTCAAGACTTGCTTAGTCAAGCTACCGAAGAATTCGATTATTATCATCCAATGGGTGGTCTCACATTTCACT
GCAGAGATGACATCTTCACTAATCTGATCTCTCACTTGAATGAACATCTATGA
Protein sequenceShow/hide protein sequence
MGLRQLLKRSSMTGNRRVSTVPKGYCAVYVGENQKKRFVIPITYLNQPCLQDLLSQATEEFDYYHPMGGLTFHCRDDIFTNLISHLNEHL