; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0016922 (gene) of Snake gourd v1 genome

Gene IDTan0016922
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationLG03:38620652..38625486
RNA-Seq ExpressionTan0016922
SyntenyTan0016922
Gene Ontology termsNA
InterPro domainsIPR036691 - Endonuclease/exonuclease/phosphatase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0046247.1 uncharacterized protein E6C27_scaffold284G00450 [Cucumis melo var. makuwa]1.9e-1236.99Show/hide
Query:  ESNFLSLVEGCWTRHFGVSPLVSFIRNLKDVKVVLRKELGRPLGGLSAEVEELGRRMKVVQTSLGVDPLSLALKEEAGRVTTTFLVATRREKASLRQKAR
        + +F+ +V   W+RH GVSPLVS ++NL  +K +LR   GR +  L+ +V      M + Q  +  +P+S  L  +A   T TF  A R E+ASLRQK+R
Subjt:  ESNFLSLVEGCWTRHFGVSPLVSFIRNLKDVKVVLRKELGRPLGGLSAEVEELGRRMKVVQTSLGVDPLSLALKEEAGRVTTTFLVATRREKASLRQKAR

Query:  VNAFKV--------------RLARNSLSRLV--DGLGRSLTSHSDV
        +   K+              R++RNSL  LV  DG G  ++SH  V
Subjt:  VNAFKV--------------RLARNSLSRLV--DGLGRSLTSHSDV

KAA0046247.1 uncharacterized protein E6C27_scaffold284G00450 [Cucumis melo var. makuwa]7.3e-3639.22Show/hide
Query:  MVEFDDFLHHADLLEVRVQGSWFTWTNSPQGGGDRLRRLDRVLVNKFWVDSLPMCVVQVHGWGVSDHCPLVF-----------SVDLTEPRRHESNFLSL
        M +FD  +  ADL+E  VQG+WFTWT+   G G  LRRLDRVLVN  W+ + P  +V V  WG+SDH P++F           S         + +F+ +
Subjt:  MVEFDDFLHHADLLEVRVQGSWFTWTNSPQGGGDRLRRLDRVLVNKFWVDSLPMCVVQVHGWGVSDHCPLVF-----------SVDLTEPRRHESNFLSL

Query:  VEGCWTRHFGVSPLVSFIRNLKDVKVVLRKELGRPLGGLSAEVEELGRRMKVVQTSLGVDPLSLALKEEAGRVTTTFLVATRREKASLRQKARVNAFKV-
        V   W+RH GVSPLVS +RNL  +K  LR++ GR +  LS EV      M   Q  +  + +S  L  +A   T TF  A R E+ASLRQK+R+   K+ 
Subjt:  VEGCWTRHFGVSPLVSFIRNLKDVKVVLRKELGRPLGGLSAEVEELGRRMKVVQTSLGVDPLSLALKEEAGRVTTTFLVATRREKASLRQKARVNAFKV-

Query:  -------------RLARNSLSRLVDGLGRSLTSHSDVFSAVV--FWDILGVQPLG
                     R++RNSL  LVD  G  ++SH  V    V  F + LG Q +G
Subjt:  -------------RLARNSLSRLVDGLGRSLTSHSDVFSAVV--FWDILGVQPLG

KAA0046851.1 uncharacterized protein E6C27_scaffold19358G00020 [Cucumis melo var. makuwa]1.3e-3740.39Show/hide
Query:  MVEFDDFLHHADLLEVRVQGSWFTWTNSPQGGGDRLRRLDRVLVNKFWVDSLPMCVVQVHGWGVSDHCPLVFSVDLTEPRR-----------HESNFLSL
        M EFD  +  ADL+E  VQG+WFTWT+  QG G  LRRLDRVLVN  W+ + P   + V  WG+SDH P++F        R            E +F+ +
Subjt:  MVEFDDFLHHADLLEVRVQGSWFTWTNSPQGGGDRLRRLDRVLVNKFWVDSLPMCVVQVHGWGVSDHCPLVFSVDLTEPRR-----------HESNFLSL

Query:  VEGCWTRHFGVSPLVSFIRNLKDVKVVLRKELGRPLGGLSAEVEELGRRMKVVQTSLGVDPLSLALKEEAGRVTTTFLVATRREKASLRQKARV------
        V   W+RH GVS LVS +RNL  +K +LR++ GR +  LS EV      M + Q  +  +PLS  L  +A   T TF  A R E+ASLRQK++V      
Subjt:  VEGCWTRHFGVSPLVSFIRNLKDVKVVLRKELGRPLGGLSAEVEELGRRMKVVQTSLGVDPLSLALKEEAGRVTTTFLVATRREKASLRQKARV------

Query:  --------NAFKVRLARNSLSRLVDGLGRSLTSHSDVFSAVV--FWDILGVQPLG
                 + + RL+RNSL  LVD  G  ++SH  V    V  F + LG Q +G
Subjt:  --------NAFKVRLARNSLSRLVDGLGRSLTSHSDVFSAVV--FWDILGVQPLG

KAA0046851.1 uncharacterized protein E6C27_scaffold19358G00020 [Cucumis melo var. makuwa]5.2e-1045.78Show/hide
Query:  DCRSLLERVTARVTSWSAGALSFAGRLQLIQSVLQSFQVYWTS----------ELERVLRAFCGGGSRV--GGCKVAWEELLL
        DC  L++R+T+R+ SW+A  LSFAGRLQL++SVL+S QVYW S          E++++LR++   G     GG KVAW ++ L
Subjt:  DCRSLLERVTARVTSWSAGALSFAGRLQLIQSVLQSFQVYWTS----------ELERVLRAFCGGGSRV--GGCKVAWEELLL

KAA0046851.1 uncharacterized protein E6C27_scaffold19358G00020 [Cucumis melo var. makuwa]5.0e-3735.31Show/hide
Query:  DCRSLLERVTARVTSWSAGALSFAGRLQLIQSVLQSFQVYWTS----------ELERVLRAFCGGGSRV--GGCKVAWEE--------------------
        DC  L++R+T+++ SW+A  LSFAGR+QL+ SVL+S QVYW S          E++++LR++   G     GG KVAW +                    
Subjt:  DCRSLLERVTARVTSWSAGALSFAGRLQLIQSVLQSFQVYWTS----------ELERVLRAFCGGGSRV--GGCKVAWEE--------------------

Query:  -----LLLLLFTRSGSLWVAWVE---------WWLGLVSSGSWCWRAILGKRALFQELVSYEIGNGRKCFVWLDPLLPGGSVFGRFGGRVVYDAASSLQR
             +L L+ T SGSLWVAWVE         W +      SWC RAIL KR   +  V  ++GNG +C VWLDP L GG++               L+R
Subjt:  -----LLLLLFTRSGSLWVAWVE---------WWLGLVSSGSWCWRAILGKRALFQELVSYEIGNGRKCFVWLDPLLPGGSVFGRFGGRVVYDAASSLQR

Query:  FCLSLIRMIVLSGSLASQEGSLFPVLGKRLDLEVKWWIGIGCCGLVVISLGMRLSRGCYEVWLTVVRWGL----------------STHRVA-GPVELR-
            L+ +IV SG L  +  SL  V GK   L V  + G+  CG+  IS  +   RG    W   + W L                S+HR+    VEL  
Subjt:  FCLSLIRMIVLSGSLASQEGSLFPVLGKRLDLEVKWWIGIGCCGLVVISLGMRLSRGCYEVWLTVVRWGL----------------STHRVA-GPVELR-

Query:  ----------RRRILRVAWAAVIYHIWRERNSRLHGG
                  RR++ RV W A IY IW E N RLHGG
Subjt:  ----------RRRILRVAWAAVIYHIWRERNSRLHGG

KAA0057641.1 hypothetical protein E6C27_scaffold43054G00020 [Cucumis melo var. makuwa]3.7e-4031.02Show/hide
Query:  ESNFLSLVEGCWTRHFGVSPLVSFIRNLKDVKVVLRKELGRPLGGLSAEVEELGRRMKVVQTSLGVDPLSLAL-KEEAGRVTTTFLVATRREKASLRQKA
        + +F+ +V   W+ H GVSPLVS +RNL  +K +LR+  GR +  LS EV      M + Q  + V+  S ++  +E G    T ++    +     +  
Subjt:  ESNFLSLVEGCWTRHFGVSPLVSFIRNLKDVKVVLRKELGRPLGGLSAEVEELGRRMKVVQTSLGVDPLSLAL-KEEAGRVTTTFLVATRREKASLRQKA

Query:  RVNAFKVRLARNSLSRLVDGLGRSLTSHSDVFSAVVF---WDILGVQ--------------------------PLGDCRSLLERVTARVTSWSAGALSFA
        +  A +V ++R  +  ++  +        D FS   F   W ++G +                          P  +    LE +T+R+ SWSA  LSFA
Subjt:  RVNAFKVRLARNSLSRLVDGLGRSLTSHSDVFSAVVF---WDILGVQ--------------------------PLGDCRSLLERVTARVTSWSAGALSFA

Query:  GRLQLIQSVLQSFQVYWTSELERVLRAFC-----GGGSRVGGCKVAWE-----ELLLLLFTRSGSLWVAWVE---------WWLGLVSSGSWCWRAILGK
        GRLQL++SVL+S QVYW S    VL A+      G G R G    AW      ++L L+ T  GSLWVAWVE         W +      SWC RAIL K
Subjt:  GRLQLIQSVLQSFQVYWTSELERVLRAFC-----GGGSRVGGCKVAWE-----ELLLLLFTRSGSLWVAWVE---------WWLGLVSSGSWCWRAILGK

Query:  RALFQELVSYEIGNGRKCFVWLDPLLPGGSVFGRFGGRVVYDAASSLQ----------------RFCLSLIRMIVL--------------SGSLASQEGS
        R   ++ V  ++GNG +C VWLDP L  G++  + G RV+YDAAS  +                R  L LI +                 SG L  +  S
Subjt:  RALFQELVSYEIGNGRKCFVWLDPLLPGGSVFGRFGGRVVYDAASSLQ----------------RFCLSLIRMIVL--------------SGSLASQEGS

Query:  LFPVLGKRLDLEVKWWIGIGCCGLVVISLGMRLSRGCYEVWLTVVRWGLSTHRVAGPVELRRRRI-LRVAWAAVIYHIWRERNSRLHGGG
        L  V GK   L V  + G+  CG+  IS  +   RG    W   + W L    + G V  R R   +R  W+  I + +R R   + G G
Subjt:  LFPVLGKRLDLEVKWWIGIGCCGLVVISLGMRLSRGCYEVWLTVVRWGLSTHRVAGPVELRRRRI-LRVAWAAVIYHIWRERNSRLHGGG

TYK18951.1 uncharacterized protein E5676_scaffold418G00380 [Cucumis melo var. makuwa]8.0e-4325.54Show/hide
Query:  MVEFDDFLHHADLLEVRVQGSWFTWTNSPQGGGDRLRRLDRVLVNKF---WVDSLPMCVVQVHGWGVSDHCPLVFSVDLTEPRRHESNFLSLVEGCWTRH
        M +FD  +   DL+E  VQG+WFTWT+  QG     +   +V+  +F   WV+                                + +F+ +V   W+RH
Subjt:  MVEFDDFLHHADLLEVRVQGSWFTWTNSPQGGGDRLRRLDRVLVNKF---WVDSLPMCVVQVHGWGVSDHCPLVFSVDLTEPRRHESNFLSLVEGCWTRH

Query:  FGVSPLVSFIRNLKDVKVVLRKELGRPLGGLSAEVEELGRRMKVVQTSLGVDPLSLALKEEAGRVTTTFLVATRREKASLRQKARVNAFKV---------
         GVSPLVS ++NL  +K +LR   GR +  L+ +V      M + Q  +  +P+S  L  +A   T TF  A R E+ASLRQK+R+   K+         
Subjt:  FGVSPLVSFIRNLKDVKVVLRKELGRPLGGLSAEVEELGRRMKVVQTSLGVDPLSLALKEEAGRVTTTFLVATRREKASLRQKARVNAFKV---------

Query:  -----RLARNSLSRLV--DGLGRSLTSHS--------------------------------DVFSAVVF-------------------------------
             R++RNSL  LV  DG G  ++SH                                 D FS   F                               
Subjt:  -----RLARNSLSRLV--DGLGRSLTSHS--------------------------------DVFSAVVF-------------------------------

Query:  ---------WDI----------------------------------------------------------------------------------------
                 WD                                                                                         
Subjt:  ---------WDI----------------------------------------------------------------------------------------

Query:  ------------------------------------LGVQPLG-----------DCRSLLERVTARVTSWSAGALSFAGRLQLIQSVLQSFQVYWTS---
                                            L V+ LG           DC  L++R+T+++ SW+A  LSFAGR+QL+ SVL+S QVYW S   
Subjt:  ------------------------------------LGVQPLG-----------DCRSLLERVTARVTSWSAGALSFAGRLQLIQSVLQSFQVYWTS---

Query:  -------ELERVLRAFCGGGSRV--GGCKVAWEE-------------------------LLLLLFTRSGSLWVAWVE---------WWLGLVSSGSWCWR
               E++++LR++   G     GG KVAW +                         +L L+ T SGSLWVAWVE         W +      SWC R
Subjt:  -------ELERVLRAFCGGGSRV--GGCKVAWEE-------------------------LLLLLFTRSGSLWVAWVE---------WWLGLVSSGSWCWR

Query:  AILGKRALFQELVSYEIGNGRKCFVWLDPLLPGGSVFGRFGGRVVYDAASSLQRFCLSLIRMIVLSGSLASQEGSLFPVLGKRLDLEVKWWIGIGCCGLV
        AIL KR   +  V  ++GNG +C VWLDP L GG++               L+R    L+ +IV SG L  +  SL  V GK   L V  + G+  CG+ 
Subjt:  AILGKRALFQELVSYEIGNGRKCFVWLDPLLPGGSVFGRFGGRVVYDAASSLQRFCLSLIRMIVLSGSLASQEGSLFPVLGKRLDLEVKWWIGIGCCGLV

Query:  VISLGMRLSRGCYEVWLTVVRWGL----------------STHRVA-GPVELR-----------RRRILRVAWAAVIYHIWRERNSRLHGG
         IS  +   RG    W   + W L                S+HR+    VEL            RR++ RV W A IY IW E N RLHGG
Subjt:  VISLGMRLSRGCYEVWLTVVRWGL----------------STHRVA-GPVELR-----------RRRILRVAWAAVIYHIWRERNSRLHGG

TrEMBL top hitse value%identityAlignment
A0A5A7TWG5 Reverse transcriptase domain-containing protein9.3e-1336.99Show/hide
Query:  ESNFLSLVEGCWTRHFGVSPLVSFIRNLKDVKVVLRKELGRPLGGLSAEVEELGRRMKVVQTSLGVDPLSLALKEEAGRVTTTFLVATRREKASLRQKAR
        + +F+ +V   W+RH GVSPLVS ++NL  +K +LR   GR +  L+ +V      M + Q  +  +P+S  L  +A   T TF  A R E+ASLRQK+R
Subjt:  ESNFLSLVEGCWTRHFGVSPLVSFIRNLKDVKVVLRKELGRPLGGLSAEVEELGRRMKVVQTSLGVDPLSLALKEEAGRVTTTFLVATRREKASLRQKAR

Query:  VNAFKV--------------RLARNSLSRLV--DGLGRSLTSHSDV
        +   K+              R++RNSL  LV  DG G  ++SH  V
Subjt:  VNAFKV--------------RLARNSLSRLV--DGLGRSLTSHSDV

A0A5A7TWG5 Reverse transcriptase domain-containing protein3.5e-3639.22Show/hide
Query:  MVEFDDFLHHADLLEVRVQGSWFTWTNSPQGGGDRLRRLDRVLVNKFWVDSLPMCVVQVHGWGVSDHCPLVF-----------SVDLTEPRRHESNFLSL
        M +FD  +  ADL+E  VQG+WFTWT+   G G  LRRLDRVLVN  W+ + P  +V V  WG+SDH P++F           S         + +F+ +
Subjt:  MVEFDDFLHHADLLEVRVQGSWFTWTNSPQGGGDRLRRLDRVLVNKFWVDSLPMCVVQVHGWGVSDHCPLVF-----------SVDLTEPRRHESNFLSL

Query:  VEGCWTRHFGVSPLVSFIRNLKDVKVVLRKELGRPLGGLSAEVEELGRRMKVVQTSLGVDPLSLALKEEAGRVTTTFLVATRREKASLRQKARVNAFKV-
        V   W+RH GVSPLVS +RNL  +K  LR++ GR +  LS EV      M   Q  +  + +S  L  +A   T TF  A R E+ASLRQK+R+   K+ 
Subjt:  VEGCWTRHFGVSPLVSFIRNLKDVKVVLRKELGRPLGGLSAEVEELGRRMKVVQTSLGVDPLSLALKEEAGRVTTTFLVATRREKASLRQKARVNAFKV-

Query:  -------------RLARNSLSRLVDGLGRSLTSHSDVFSAVV--FWDILGVQPLG
                     R++RNSL  LVD  G  ++SH  V    V  F + LG Q +G
Subjt:  -------------RLARNSLSRLVDGLGRSLTSHSDVFSAVV--FWDILGVQPLG

A0A5A7TZS0 Reverse transcriptase domain-containing protein6.4e-3840.39Show/hide
Query:  MVEFDDFLHHADLLEVRVQGSWFTWTNSPQGGGDRLRRLDRVLVNKFWVDSLPMCVVQVHGWGVSDHCPLVFSVDLTEPRR-----------HESNFLSL
        M EFD  +  ADL+E  VQG+WFTWT+  QG G  LRRLDRVLVN  W+ + P   + V  WG+SDH P++F        R            E +F+ +
Subjt:  MVEFDDFLHHADLLEVRVQGSWFTWTNSPQGGGDRLRRLDRVLVNKFWVDSLPMCVVQVHGWGVSDHCPLVFSVDLTEPRR-----------HESNFLSL

Query:  VEGCWTRHFGVSPLVSFIRNLKDVKVVLRKELGRPLGGLSAEVEELGRRMKVVQTSLGVDPLSLALKEEAGRVTTTFLVATRREKASLRQKARV------
        V   W+RH GVS LVS +RNL  +K +LR++ GR +  LS EV      M + Q  +  +PLS  L  +A   T TF  A R E+ASLRQK++V      
Subjt:  VEGCWTRHFGVSPLVSFIRNLKDVKVVLRKELGRPLGGLSAEVEELGRRMKVVQTSLGVDPLSLALKEEAGRVTTTFLVATRREKASLRQKARV------

Query:  --------NAFKVRLARNSLSRLVDGLGRSLTSHSDVFSAVV--FWDILGVQPLG
                 + + RL+RNSL  LVD  G  ++SH  V    V  F + LG Q +G
Subjt:  --------NAFKVRLARNSLSRLVDGLGRSLTSHSDVFSAVV--FWDILGVQPLG

A0A5A7TZS0 Reverse transcriptase domain-containing protein2.5e-1045.78Show/hide
Query:  DCRSLLERVTARVTSWSAGALSFAGRLQLIQSVLQSFQVYWTS----------ELERVLRAFCGGGSRV--GGCKVAWEELLL
        DC  L++R+T+R+ SW+A  LSFAGRLQL++SVL+S QVYW S          E++++LR++   G     GG KVAW ++ L
Subjt:  DCRSLLERVTARVTSWSAGALSFAGRLQLIQSVLQSFQVYWTS----------ELERVLRAFCGGGSRV--GGCKVAWEELLL

A0A5A7TZS0 Reverse transcriptase domain-containing protein2.4e-3735.31Show/hide
Query:  DCRSLLERVTARVTSWSAGALSFAGRLQLIQSVLQSFQVYWTS----------ELERVLRAFCGGGSRV--GGCKVAWEE--------------------
        DC  L++R+T+++ SW+A  LSFAGR+QL+ SVL+S QVYW S          E++++LR++   G     GG KVAW +                    
Subjt:  DCRSLLERVTARVTSWSAGALSFAGRLQLIQSVLQSFQVYWTS----------ELERVLRAFCGGGSRV--GGCKVAWEE--------------------

Query:  -----LLLLLFTRSGSLWVAWVE---------WWLGLVSSGSWCWRAILGKRALFQELVSYEIGNGRKCFVWLDPLLPGGSVFGRFGGRVVYDAASSLQR
             +L L+ T SGSLWVAWVE         W +      SWC RAIL KR   +  V  ++GNG +C VWLDP L GG++               L+R
Subjt:  -----LLLLLFTRSGSLWVAWVE---------WWLGLVSSGSWCWRAILGKRALFQELVSYEIGNGRKCFVWLDPLLPGGSVFGRFGGRVVYDAASSLQR

Query:  FCLSLIRMIVLSGSLASQEGSLFPVLGKRLDLEVKWWIGIGCCGLVVISLGMRLSRGCYEVWLTVVRWGL----------------STHRVA-GPVELR-
            L+ +IV SG L  +  SL  V GK   L V  + G+  CG+  IS  +   RG    W   + W L                S+HR+    VEL  
Subjt:  FCLSLIRMIVLSGSLASQEGSLFPVLGKRLDLEVKWWIGIGCCGLVVISLGMRLSRGCYEVWLTVVRWGL----------------STHRVA-GPVELR-

Query:  ----------RRRILRVAWAAVIYHIWRERNSRLHGG
                  RR++ RV W A IY IW E N RLHGG
Subjt:  ----------RRRILRVAWAAVIYHIWRERNSRLHGG

A0A5A7UVV0 Uncharacterized protein1.8e-4031.02Show/hide
Query:  ESNFLSLVEGCWTRHFGVSPLVSFIRNLKDVKVVLRKELGRPLGGLSAEVEELGRRMKVVQTSLGVDPLSLAL-KEEAGRVTTTFLVATRREKASLRQKA
        + +F+ +V   W+ H GVSPLVS +RNL  +K +LR+  GR +  LS EV      M + Q  + V+  S ++  +E G    T ++    +     +  
Subjt:  ESNFLSLVEGCWTRHFGVSPLVSFIRNLKDVKVVLRKELGRPLGGLSAEVEELGRRMKVVQTSLGVDPLSLAL-KEEAGRVTTTFLVATRREKASLRQKA

Query:  RVNAFKVRLARNSLSRLVDGLGRSLTSHSDVFSAVVF---WDILGVQ--------------------------PLGDCRSLLERVTARVTSWSAGALSFA
        +  A +V ++R  +  ++  +        D FS   F   W ++G +                          P  +    LE +T+R+ SWSA  LSFA
Subjt:  RVNAFKVRLARNSLSRLVDGLGRSLTSHSDVFSAVVF---WDILGVQ--------------------------PLGDCRSLLERVTARVTSWSAGALSFA

Query:  GRLQLIQSVLQSFQVYWTSELERVLRAFC-----GGGSRVGGCKVAWE-----ELLLLLFTRSGSLWVAWVE---------WWLGLVSSGSWCWRAILGK
        GRLQL++SVL+S QVYW S    VL A+      G G R G    AW      ++L L+ T  GSLWVAWVE         W +      SWC RAIL K
Subjt:  GRLQLIQSVLQSFQVYWTSELERVLRAFC-----GGGSRVGGCKVAWE-----ELLLLLFTRSGSLWVAWVE---------WWLGLVSSGSWCWRAILGK

Query:  RALFQELVSYEIGNGRKCFVWLDPLLPGGSVFGRFGGRVVYDAASSLQ----------------RFCLSLIRMIVL--------------SGSLASQEGS
        R   ++ V  ++GNG +C VWLDP L  G++  + G RV+YDAAS  +                R  L LI +                 SG L  +  S
Subjt:  RALFQELVSYEIGNGRKCFVWLDPLLPGGSVFGRFGGRVVYDAASSLQ----------------RFCLSLIRMIVL--------------SGSLASQEGS

Query:  LFPVLGKRLDLEVKWWIGIGCCGLVVISLGMRLSRGCYEVWLTVVRWGLSTHRVAGPVELRRRRI-LRVAWAAVIYHIWRERNSRLHGGG
        L  V GK   L V  + G+  CG+  IS  +   RG    W   + W L    + G V  R R   +R  W+  I + +R R   + G G
Subjt:  LFPVLGKRLDLEVKWWIGIGCCGLVVISLGMRLSRGCYEVWLTVVRWGLSTHRVAGPVELRRRRI-LRVAWAAVIYHIWRERNSRLHGGG

A0A5D3D5X6 Reverse transcriptase domain-containing protein3.9e-4325.54Show/hide
Query:  MVEFDDFLHHADLLEVRVQGSWFTWTNSPQGGGDRLRRLDRVLVNKF---WVDSLPMCVVQVHGWGVSDHCPLVFSVDLTEPRRHESNFLSLVEGCWTRH
        M +FD  +   DL+E  VQG+WFTWT+  QG     +   +V+  +F   WV+                                + +F+ +V   W+RH
Subjt:  MVEFDDFLHHADLLEVRVQGSWFTWTNSPQGGGDRLRRLDRVLVNKF---WVDSLPMCVVQVHGWGVSDHCPLVFSVDLTEPRRHESNFLSLVEGCWTRH

Query:  FGVSPLVSFIRNLKDVKVVLRKELGRPLGGLSAEVEELGRRMKVVQTSLGVDPLSLALKEEAGRVTTTFLVATRREKASLRQKARVNAFKV---------
         GVSPLVS ++NL  +K +LR   GR +  L+ +V      M + Q  +  +P+S  L  +A   T TF  A R E+ASLRQK+R+   K+         
Subjt:  FGVSPLVSFIRNLKDVKVVLRKELGRPLGGLSAEVEELGRRMKVVQTSLGVDPLSLALKEEAGRVTTTFLVATRREKASLRQKARVNAFKV---------

Query:  -----RLARNSLSRLV--DGLGRSLTSHS--------------------------------DVFSAVVF-------------------------------
             R++RNSL  LV  DG G  ++SH                                 D FS   F                               
Subjt:  -----RLARNSLSRLV--DGLGRSLTSHS--------------------------------DVFSAVVF-------------------------------

Query:  ---------WDI----------------------------------------------------------------------------------------
                 WD                                                                                         
Subjt:  ---------WDI----------------------------------------------------------------------------------------

Query:  ------------------------------------LGVQPLG-----------DCRSLLERVTARVTSWSAGALSFAGRLQLIQSVLQSFQVYWTS---
                                            L V+ LG           DC  L++R+T+++ SW+A  LSFAGR+QL+ SVL+S QVYW S   
Subjt:  ------------------------------------LGVQPLG-----------DCRSLLERVTARVTSWSAGALSFAGRLQLIQSVLQSFQVYWTS---

Query:  -------ELERVLRAFCGGGSRV--GGCKVAWEE-------------------------LLLLLFTRSGSLWVAWVE---------WWLGLVSSGSWCWR
               E++++LR++   G     GG KVAW +                         +L L+ T SGSLWVAWVE         W +      SWC R
Subjt:  -------ELERVLRAFCGGGSRV--GGCKVAWEE-------------------------LLLLLFTRSGSLWVAWVE---------WWLGLVSSGSWCWR

Query:  AILGKRALFQELVSYEIGNGRKCFVWLDPLLPGGSVFGRFGGRVVYDAASSLQRFCLSLIRMIVLSGSLASQEGSLFPVLGKRLDLEVKWWIGIGCCGLV
        AIL KR   +  V  ++GNG +C VWLDP L GG++               L+R    L+ +IV SG L  +  SL  V GK   L V  + G+  CG+ 
Subjt:  AILGKRALFQELVSYEIGNGRKCFVWLDPLLPGGSVFGRFGGRVVYDAASSLQRFCLSLIRMIVLSGSLASQEGSLFPVLGKRLDLEVKWWIGIGCCGLV

Query:  VISLGMRLSRGCYEVWLTVVRWGL----------------STHRVA-GPVELR-----------RRRILRVAWAAVIYHIWRERNSRLHGG
         IS  +   RG    W   + W L                S+HR+    VEL            RR++ RV W A IY IW E N RLHGG
Subjt:  VISLGMRLSRGCYEVWLTVVRWGL----------------STHRVA-GPVELR-----------RRRILRVAWAAVIYHIWRERNSRLHGG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G40390.1 DNAse I-like superfamily protein1.2e-0422.8Show/hide
Query:  LHHADLLEVRVQGSWFTWTNSPQGGGDRLRRLDRVLVNKFWVDSLPMCVVQVHGWGVSDHCPLVFSVDLTEPRRHES------------NFLSLVEGCWT
        +  +DL+++  +G  +TW+N  Q     LR+LDR +VN  W+ + P           SDH   +  ++ + P   +             +F+S +   W 
Subjt:  LHHADLLEVRVQGSWFTWTNSPQGGGDRLRRLDRVLVNKFWVDSLPMCVVQVHGWGVSDHCPLVFSVDLTEPRRHES------------NFLSLVEGCWT

Query:  RHFGVSPLVSFIRNLKDVKVVLRKELGRPLGGLSAEVEELGRRMKVVQTSLGVDPLSLALK-EEAGRVTTTFLVATRREKASLRQKARVNAFK
        +   V    SF+ +L +    L KE  +   GL+       R    +Q  L  +P     + E   R    F  A    ++  +QK+R+   K
Subjt:  RHFGVSPLVSFIRNLKDVKVVLRKELGRPLGGLSAEVEELGRRMKVVQTSLGVDPLSLALK-EEAGRVTTTFLVATRREKASLRQKARVNAFK

AT3G24255.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein1.9e-1330.29Show/hide
Query:  DCRSLLERVTARVTSWSAGALSFAGRLQLIQSVLQSFQVYWTS----------ELERVLRAFCGGGSRVG--GCKVAWEELLL-----------LLFTRS
        D   L+E++  R+  W+A  LSFAGRLQLI SV+ S   +W S          E++ +  +F   G  +     KVAW ++             L     
Subjt:  DCRSLLERVTARVTSWSAGALSFAGRLQLIQSVLQSFQVYWTS----------ELERVLRAFCGGGSRVG--GCKVAWEELLL-----------LLFTRS

Query:  GSLWVAWVEWWLGLVSSGSWCWRAILGKRALFQELVSYEIGNGRKCFVWLDPLLPGGSVFGRFGGRVVYDAASSL
        GS W        G  + GSW W+ IL  RAL    V ++I NG     W D     G +    G R   D   +L
Subjt:  GSLWVAWVEWWLGLVSSGSWCWRAILGKRALFQELVSYEIGNGRKCFVWLDPLLPGGSVFGRFGGRVVYDAASSL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTGAGTTTGATGATTTTTTGCATCATGCTGATCTATTGGAGGTTCGGGTCCAGGGGAGTTGGTTTACTTGGACGAATAGTCCTCAAGGGGGTGGGGACAGGTTGAG
ACGGTTGGATAGGGTTCTTGTGAACAAATTTTGGGTTGATTCTTTGCCTATGTGTGTTGTGCAGGTGCATGGGTGGGGGGTATCTGACCATTGTCCATTGGTGTTCAGTG
TGGATTTAACTGAGCCTAGGCGACATGAGAGTAACTTTTTGAGCCTTGTTGAGGGGTGCTGGACTAGGCATTTTGGAGTGTCTCCTTTGGTGAGTTTCATTCGTAATTTG
AAAGATGTGAAGGTGGTCCTTCGGAAGGAGCTTGGTAGACCTTTGGGTGGGCTTAGTGCGGAGGTGGAGGAGTTGGGTAGGAGGATGAAGGTTGTTCAGACTTCTTTGGG
AGTTGATCCCTTGTCTTTGGCTTTGAAGGAGGAGGCTGGGAGAGTGACAACAACATTTTTGGTTGCCACTCGGCGGGAGAAGGCTTCTTTACGTCAGAAGGCGAGGGTGA
ATGCTTTTAAGGTCAGGCTGGCGCGTAATTCTTTATCAAGGTTGGTTGATGGGTTGGGTCGCTCCTTGACCTCCCACTCTGATGTCTTCTCAGCTGTTGTATTTTGGGAT
ATCCTTGGTGTGCAACCGCTGGGAGATTGCAGATCTTTACTTGAGCGGGTTACTGCTAGGGTGACCAGTTGGTCTGCTGGAGCGCTGTCGTTTGCAGGGAGATTGCAACT
CATTCAGTCGGTCCTCCAGAGTTTTCAGGTCTATTGGACTAGTGAATTGGAGAGGGTGTTGCGAGCTTTTTGTGGAGGGGGGAGCAGGGTGGGAGGGTGTAAGGTGGCTT
GGGAGGAGCTTCTTTTGCTTCTCTTCACCCGTTCAGGCTCGCTTTGGGTGGCATGGGTGGAGTGGTGGCTTGGGTTGGTGAGTAGTGGGTCGTGGTGCTGGAGGGCCATC
TTAGGGAAGCGTGCGCTTTTTCAGGAGCTTGTTTCGTATGAGATTGGTAATGGGCGCAAGTGCTTTGTTTGGCTTGATCCTTTGTTGCCCGGGGGATCAGTGTTTGGGAG
GTTTGGTGGTAGAGTTGTGTATGATGCGGCGAGTTCTTTACAGCGGTTTTGCCTTTCCCTAATCAGGATGATTGTCTTGTCTGGCTCCCTAGCCAGTCAGGAGGGTTCTC
TATTTCCAGTGCTTGGGAAGCGGTTAGACCTAGAGGTGAAGTGGTGGATTGGCATAGGTTGTTGTGGTTTGGTGGTAATATCCCTAGGCATGCGTTTATCGCGTGGCTGC
TATGAGGTTTGGTTGACGGTTGTGCGTTGGGGTTTATCTACTCATAGGGTTGCTGGCCCGGTTGAACTAAGGAGGAGGAGGATCTTGAGGGTTGCCTGGGCTGCTGTGAT
CTACCATATTTGGAGGGAGCGTAACTCTAGGTTGCATGGTGGTGGGCCTCTGATTGTGGGGGTTGTGCTACTTCTTGTTAGGCAGGATCTGTTGAGTTGGGCTTCTTCTT
GGACTTGTGTTGCGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGTTGAGTTTGATGATTTTTTGCATCATGCTGATCTATTGGAGGTTCGGGTCCAGGGGAGTTGGTTTACTTGGACGAATAGTCCTCAAGGGGGTGGGGACAGGTTGAG
ACGGTTGGATAGGGTTCTTGTGAACAAATTTTGGGTTGATTCTTTGCCTATGTGTGTTGTGCAGGTGCATGGGTGGGGGGTATCTGACCATTGTCCATTGGTGTTCAGTG
TGGATTTAACTGAGCCTAGGCGACATGAGAGTAACTTTTTGAGCCTTGTTGAGGGGTGCTGGACTAGGCATTTTGGAGTGTCTCCTTTGGTGAGTTTCATTCGTAATTTG
AAAGATGTGAAGGTGGTCCTTCGGAAGGAGCTTGGTAGACCTTTGGGTGGGCTTAGTGCGGAGGTGGAGGAGTTGGGTAGGAGGATGAAGGTTGTTCAGACTTCTTTGGG
AGTTGATCCCTTGTCTTTGGCTTTGAAGGAGGAGGCTGGGAGAGTGACAACAACATTTTTGGTTGCCACTCGGCGGGAGAAGGCTTCTTTACGTCAGAAGGCGAGGGTGA
ATGCTTTTAAGGTCAGGCTGGCGCGTAATTCTTTATCAAGGTTGGTTGATGGGTTGGGTCGCTCCTTGACCTCCCACTCTGATGTCTTCTCAGCTGTTGTATTTTGGGAT
ATCCTTGGTGTGCAACCGCTGGGAGATTGCAGATCTTTACTTGAGCGGGTTACTGCTAGGGTGACCAGTTGGTCTGCTGGAGCGCTGTCGTTTGCAGGGAGATTGCAACT
CATTCAGTCGGTCCTCCAGAGTTTTCAGGTCTATTGGACTAGTGAATTGGAGAGGGTGTTGCGAGCTTTTTGTGGAGGGGGGAGCAGGGTGGGAGGGTGTAAGGTGGCTT
GGGAGGAGCTTCTTTTGCTTCTCTTCACCCGTTCAGGCTCGCTTTGGGTGGCATGGGTGGAGTGGTGGCTTGGGTTGGTGAGTAGTGGGTCGTGGTGCTGGAGGGCCATC
TTAGGGAAGCGTGCGCTTTTTCAGGAGCTTGTTTCGTATGAGATTGGTAATGGGCGCAAGTGCTTTGTTTGGCTTGATCCTTTGTTGCCCGGGGGATCAGTGTTTGGGAG
GTTTGGTGGTAGAGTTGTGTATGATGCGGCGAGTTCTTTACAGCGGTTTTGCCTTTCCCTAATCAGGATGATTGTCTTGTCTGGCTCCCTAGCCAGTCAGGAGGGTTCTC
TATTTCCAGTGCTTGGGAAGCGGTTAGACCTAGAGGTGAAGTGGTGGATTGGCATAGGTTGTTGTGGTTTGGTGGTAATATCCCTAGGCATGCGTTTATCGCGTGGCTGC
TATGAGGTTTGGTTGACGGTTGTGCGTTGGGGTTTATCTACTCATAGGGTTGCTGGCCCGGTTGAACTAAGGAGGAGGAGGATCTTGAGGGTTGCCTGGGCTGCTGTGAT
CTACCATATTTGGAGGGAGCGTAACTCTAGGTTGCATGGTGGTGGGCCTCTGATTGTGGGGGTTGTGCTACTTCTTGTTAGGCAGGATCTGTTGAGTTGGGCTTCTTCTT
GGACTTGTGTTGCGTGA
Protein sequenceShow/hide protein sequence
MVEFDDFLHHADLLEVRVQGSWFTWTNSPQGGGDRLRRLDRVLVNKFWVDSLPMCVVQVHGWGVSDHCPLVFSVDLTEPRRHESNFLSLVEGCWTRHFGVSPLVSFIRNL
KDVKVVLRKELGRPLGGLSAEVEELGRRMKVVQTSLGVDPLSLALKEEAGRVTTTFLVATRREKASLRQKARVNAFKVRLARNSLSRLVDGLGRSLTSHSDVFSAVVFWD
ILGVQPLGDCRSLLERVTARVTSWSAGALSFAGRLQLIQSVLQSFQVYWTSELERVLRAFCGGGSRVGGCKVAWEELLLLLFTRSGSLWVAWVEWWLGLVSSGSWCWRAI
LGKRALFQELVSYEIGNGRKCFVWLDPLLPGGSVFGRFGGRVVYDAASSLQRFCLSLIRMIVLSGSLASQEGSLFPVLGKRLDLEVKWWIGIGCCGLVVISLGMRLSRGC
YEVWLTVVRWGLSTHRVAGPVELRRRRILRVAWAAVIYHIWRERNSRLHGGGPLIVGVVLLLVRQDLLSWASSWTCVA