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Tan0016948 (gene) of Snake gourd v1 genome

Gene IDTan0016948
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionLOW QUALITY PROTEIN: uncharacterized protein LOC111022007
Genome locationLG08:30300442..30300987
RNA-Seq ExpressionTan0016948
SyntenyTan0016948
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0048500.1 protein MNN4-like [Cucumis melo var. makuwa]1.4e-0626.35Show/hide
Query:  VGKMIFTEGGFSPLVFEMLVTMLRRIEFNGWRGVCLKEATFYPKIVQNFYAANLGEGQREVKVREVMVNFGSGIINWIFG-----------KSDPKYEPG
        +GK    E G  P   ++ + +   I+   W+       T  P ++  FY  ++   +    V+  MVNFG  ++N ++G           K     +  
Subjt:  VGKMIFTEGGFSPLVFEMLVTMLRRIEFNGWRGVCLKEATFYPKIVQNFYAANLGEGQREVKVREVMVNFGSGIINWIFG-----------KSDPKYEPG

Query:  NALLVLEDAKMLKDV-----LQLKPAMLNLEATIWATQIKNRIMPTTHDHIMTFARTILCYCSMKGI
        NAL  +    M  D+      QL P  L   A++W   IK  +MPT HD+ ++  R +L YC M+ I
Subjt:  NALLVLEDAKMLKDV-----LQLKPAMLNLEATIWATQIKNRIMPTTHDHIMTFARTILCYCSMKGI

XP_022154847.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111022007 [Momordica charantia]3.0e-0427.04Show/hide
Query:  IFTEGGFSPLVFEMLVTMLRRIEFNGWRGVCLKEATFYPKIVQNFYAANLGEGQREVKVR--EVMVNFGSGIINWIFGKSDPKYEPGNALLVLEDAKMLK
        I  E GF      +   + +RI  NGW  +          +V+ FY A       EV+VR  E++V+            SD + E    L+         
Subjt:  IFTEGGFSPLVFEMLVTMLRRIEFNGWRGVCLKEATFYPKIVQNFYAANLGEGQREVKVR--EVMVNFGSGIINWIFGKSDPKYEPGNALLVLEDAKMLK

Query:  DV---LQLKPAMLNLEATIWATQIKNRIMPTTHDHIMTFARTILCYCSMKGIKSHQGGL
             L LKP  +N +AT+W   +KNR++PT++D  +   R ++ Y  +KG++ + G L
Subjt:  DV---LQLKPAMLNLEATIWATQIKNRIMPTTHDHIMTFARTILCYCSMKGIKSHQGGL

XP_038876674.1 chromatin assembly factor 1 subunit A-like, partial [Benincasa hispida]3.9e-0426.21Show/hide
Query:  RGVCLKEATFYPKIVQNFYAANLGEGQREVKVREVMVNFGSGIINWIFGKSDPKYEPGNALL------VLEDAKM------------LKDVLQLKPAMLN
        +G  +++++    +V++FY   L   +  V ++   V+F +  IN I+   D  Y  GN ++       +EDA              LK V  L    L 
Subjt:  RGVCLKEATFYPKIVQNFYAANLGEGQREVKVREVMVNFGSGIINWIFGKSDPKYEPGNALL------VLEDAKM------------LKDVLQLKPAMLN

Query:  LEATIWATQIKNRIMPTTHDHIMTFARTILCYCSMKGIKSHQGGL
        LE  +W   +K R++ TTHD  ++  R +  YC ++ I    G L
Subjt:  LEATIWATQIKNRIMPTTHDHIMTFARTILCYCSMKGIKSHQGGL

TrEMBL top hitse value%identityAlignment
A0A5A7TZE0 Protein MNN4-like6.9e-0726.35Show/hide
Query:  VGKMIFTEGGFSPLVFEMLVTMLRRIEFNGWRGVCLKEATFYPKIVQNFYAANLGEGQREVKVREVMVNFGSGIINWIFG-----------KSDPKYEPG
        +GK    E G  P   ++ + +   I+   W+       T  P ++  FY  ++   +    V+  MVNFG  ++N ++G           K     +  
Subjt:  VGKMIFTEGGFSPLVFEMLVTMLRRIEFNGWRGVCLKEATFYPKIVQNFYAANLGEGQREVKVREVMVNFGSGIINWIFG-----------KSDPKYEPG

Query:  NALLVLEDAKMLKDV-----LQLKPAMLNLEATIWATQIKNRIMPTTHDHIMTFARTILCYCSMKGI
        NAL  +    M  D+      QL P  L   A++W   IK  +MPT HD+ ++  R +L YC M+ I
Subjt:  NALLVLEDAKMLKDV-----LQLKPAMLNLEATIWATQIKNRIMPTTHDHIMTFARTILCYCSMKGI

A0A5A7U0U4 Uncharacterized protein9.4e-0431.09Show/hide
Query:  PKIVQNFYAANLGEGQREVKVREVMVNFGSGIINWIFGKSDPKYEPG--------NALLVLEDAK--------MLKDVLQLKPAMLNLEATIWATQIKNR
        P +V  FY   +   +   +V+   +NFG   IN I+G  +     G        N    LE AK        +   + QL P  L  EA++W   IK  
Subjt:  PKIVQNFYAANLGEGQREVKVREVMVNFGSGIINWIFGKSDPKYEPG--------NALLVLEDAK--------MLKDVLQLKPAMLNLEATIWATQIKNR

Query:  IMPTTHDHIMTFARTILCY
        IMPT HD+I++  R +L Y
Subjt:  IMPTTHDHIMTFARTILCY

A0A6J1DMT3 LOW QUALITY PROTEIN: uncharacterized protein LOC1110220071.4e-0427.04Show/hide
Query:  IFTEGGFSPLVFEMLVTMLRRIEFNGWRGVCLKEATFYPKIVQNFYAANLGEGQREVKVR--EVMVNFGSGIINWIFGKSDPKYEPGNALLVLEDAKMLK
        I  E GF      +   + +RI  NGW  +          +V+ FY A       EV+VR  E++V+            SD + E    L+         
Subjt:  IFTEGGFSPLVFEMLVTMLRRIEFNGWRGVCLKEATFYPKIVQNFYAANLGEGQREVKVR--EVMVNFGSGIINWIFGKSDPKYEPGNALLVLEDAKMLK

Query:  DV---LQLKPAMLNLEATIWATQIKNRIMPTTHDHIMTFARTILCYCSMKGIKSHQGGL
             L LKP  +N +AT+W   +KNR++PT++D  +   R ++ Y  +KG++ + G L
Subjt:  DV---LQLKPAMLNLEATIWATQIKNRIMPTTHDHIMTFARTILCYCSMKGIKSHQGGL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTGGCAAGATGATTTTCACTGAAGGGGGGTTTTCCCCTCTAGTCTTTGAGATGCTCGTGACAATGTTAAGGAGAATAGAATTTAACGGGTGGAGGGGTGTGTGCCT
GAAGGAGGCCACTTTCTACCCCAAGATCGTACAAAATTTCTATGCGGCAAATCTCGGCGAAGGACAGAGGGAAGTGAAGGTGAGAGAAGTCATGGTGAATTTTGGTAGTG
GCATTATTAACTGGATTTTCGGAAAGTCTGATCCCAAGTATGAGCCAGGCAATGCACTTCTAGTCTTAGAAGACGCAAAGATGCTAAAGGATGTGTTGCAGTTGAAGCCT
GCAATGCTGAACCTTGAGGCGACAATATGGGCAACACAAATCAAGAATAGAATTATGCCTACCACCCACGACCACATAATGACTTTCGCCAGGACGATTCTCTGTTATTG
TTCCATGAAGGGAATAAAATCACATCAAGGCGGTCTTTGCCAAGCCTAG
mRNA sequenceShow/hide mRNA sequence
ATGGTTGGCAAGATGATTTTCACTGAAGGGGGGTTTTCCCCTCTAGTCTTTGAGATGCTCGTGACAATGTTAAGGAGAATAGAATTTAACGGGTGGAGGGGTGTGTGCCT
GAAGGAGGCCACTTTCTACCCCAAGATCGTACAAAATTTCTATGCGGCAAATCTCGGCGAAGGACAGAGGGAAGTGAAGGTGAGAGAAGTCATGGTGAATTTTGGTAGTG
GCATTATTAACTGGATTTTCGGAAAGTCTGATCCCAAGTATGAGCCAGGCAATGCACTTCTAGTCTTAGAAGACGCAAAGATGCTAAAGGATGTGTTGCAGTTGAAGCCT
GCAATGCTGAACCTTGAGGCGACAATATGGGCAACACAAATCAAGAATAGAATTATGCCTACCACCCACGACCACATAATGACTTTCGCCAGGACGATTCTCTGTTATTG
TTCCATGAAGGGAATAAAATCACATCAAGGCGGTCTTTGCCAAGCCTAG
Protein sequenceShow/hide protein sequence
MVGKMIFTEGGFSPLVFEMLVTMLRRIEFNGWRGVCLKEATFYPKIVQNFYAANLGEGQREVKVREVMVNFGSGIINWIFGKSDPKYEPGNALLVLEDAKMLKDVLQLKP
AMLNLEATIWATQIKNRIMPTTHDHIMTFARTILCYCSMKGIKSHQGGLCQA