; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0016971 (gene) of Snake gourd v1 genome

Gene IDTan0016971
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionLEA_2 domain-containing protein
Genome locationLG07:67202681..67203733
RNA-Seq ExpressionTan0016971
SyntenyTan0016971
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR004864 - Late embryogenesis abundant protein, LEA_2 subgroup


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0042716.1 late embryogenesis abundant protein [Cucumis melo var. makuwa]2.4e-7876.64Show/hide
Query:  MADDNQSFPLAHYQAHHKSDEEQQKLSTFKTLKKERSNKCFIYVFSAFVFLSVAVLIFALIVLRVNSPTIHFSSISVAKFSISN-TNSSSP-SMNLTLIA
        M +D+QSFPLAHYQAHHK+DEEQQ L+TFKTL KERSNKCFIY+FS FVFLSVA+LIFALIVLRVNSP+I+ S++S+ KFS+SN  NSSSP S++L+  A
Subjt:  MADDNQSFPLAHYQAHHKSDEEQQKLSTFKTLKKERSNKCFIYVFSAFVFLSVAVLIFALIVLRVNSPTIHFSSISVAKFSISN-TNSSSP-SMNLTLIA

Query:  EFAVDNSNFGPFNFDNGTVGLMYGGAIVGERSTGGGRAEAKGTKSMNVTVEGFAKNVSGDLNSTSGILNLSSFANLRGRVRLIHVFRKRISSAITCSINL
         F VDNSNFGPFNFDNGTVGL+YGG I GERSTGGGRAEAKG+K MNVTVEG AKNVSG    ++GIL+LSSF  LRGRVRLIHVFR+R+SS I+CS+NL
Subjt:  EFAVDNSNFGPFNFDNGTVGLMYGGAIVGERSTGGGRAEAKGTKSMNVTVEGFAKNVSGDLNSTSGILNLSSFANLRGRVRLIHVFRKRISSAITCSINL

Query:  DLNTHQIQPDWVCE
        DLNTHQIQ +WVCE
Subjt:  DLNTHQIQPDWVCE

KAG6579535.1 Late embryogenesis abundant protein, partial [Cucurbita argyrosperma subsp. sororia]2.3e-8177.46Show/hide
Query:  MADDNQSFPLAHYQAHHKSDEEQQK-LSTFKTLKKERSNKCFIYVFSAFVFLSVAVLIFALIVLRVNSPTIHFSSISVAKFSISNTNSSSPSMNLTLIAE
        M DD+QSFP+AHYQAHHKSDEEQ + L+TFK LKKERSNKCFIYVFSAFVFLSVAVLIFALIVLRVNSP +HFSS+SVAKFS+SNTNSSSPS+NLTL A+
Subjt:  MADDNQSFPLAHYQAHHKSDEEQQK-LSTFKTLKKERSNKCFIYVFSAFVFLSVAVLIFALIVLRVNSPTIHFSSISVAKFSISNTNSSSPSMNLTLIAE

Query:  FAVDNSNFGPFNFDNGTVGLMYGGAIVGERSTGGGRAEAKGTKSMNVTVEGFAKNVSGDLNSTSGILNLSSFANLRGRVRLIHVFRKRISSAITCSINLD
         AVDNSNFGPFNFD+ +VG +Y GAIVG+ +TG GR +AKGTK+MNVTV   AKN+S D N+ S +LNLSSFANLRGRVRLIH+FR+R SS I CS+ LD
Subjt:  FAVDNSNFGPFNFDNGTVGLMYGGAIVGERSTGGGRAEAKGTKSMNVTVEGFAKNVSGDLNSTSGILNLSSFANLRGRVRLIHVFRKRISSAITCSINLD

Query:  LNTHQIQPDWVCE
        LNTHQIQ +WVCE
Subjt:  LNTHQIQPDWVCE

XP_008437349.1 PREDICTED: late embryogenesis abundant protein At1g64065 [Cucumis melo]1.8e-7876.64Show/hide
Query:  MADDNQSFPLAHYQAHHKSDEEQQKLSTFKTLKKERSNKCFIYVFSAFVFLSVAVLIFALIVLRVNSPTIHFSSISVAKFSISN-TNSSSP-SMNLTLIA
        M +D+QSFPLAHYQAHHK+DEEQQ L+TFKTL KERSNKCFIY+FS FVFLSVA+LIFALIVLRVNSP+I+ S++S+ KFS+SN  NSSSP S++L+  A
Subjt:  MADDNQSFPLAHYQAHHKSDEEQQKLSTFKTLKKERSNKCFIYVFSAFVFLSVAVLIFALIVLRVNSPTIHFSSISVAKFSISN-TNSSSP-SMNLTLIA

Query:  EFAVDNSNFGPFNFDNGTVGLMYGGAIVGERSTGGGRAEAKGTKSMNVTVEGFAKNVSGDLNSTSGILNLSSFANLRGRVRLIHVFRKRISSAITCSINL
         F VDNSNFGPFNFDNGTVGL+YGG I GERSTGGGRAEAKG+K MNVTVEG AKNVSG    ++GIL+LSSF  LRGRVRLIHVFR+R+SS I+CS+NL
Subjt:  EFAVDNSNFGPFNFDNGTVGLMYGGAIVGERSTGGGRAEAKGTKSMNVTVEGFAKNVSGDLNSTSGILNLSSFANLRGRVRLIHVFRKRISSAITCSINL

Query:  DLNTHQIQPDWVCE
        DLNTHQIQ +WVCE
Subjt:  DLNTHQIQPDWVCE

XP_022969774.1 uncharacterized protein LOC111468875 [Cucurbita maxima]8.8e-8176.53Show/hide
Query:  MADDNQSFPLAHYQAHHKSDEEQQK-LSTFKTLKKERSNKCFIYVFSAFVFLSVAVLIFALIVLRVNSPTIHFSSISVAKFSISNTNSSSPSMNLTLIAE
        MADD+QSFP+AHY+AHHKSDEEQ++ L+TFK L+KERSNKCFIYVFSAFVFLSVAVLIFALIVLRVNSP +HFSS+SVAKFS+SNTNSSSPS+NLT+ A+
Subjt:  MADDNQSFPLAHYQAHHKSDEEQQK-LSTFKTLKKERSNKCFIYVFSAFVFLSVAVLIFALIVLRVNSPTIHFSSISVAKFSISNTNSSSPSMNLTLIAE

Query:  FAVDNSNFGPFNFDNGTVGLMYGGAIVGERSTGGGRAEAKGTKSMNVTVEGFAKNVSGDLNSTSGILNLSSFANLRGRVRLIHVFRKRISSAITCSINLD
         AVDNSNFGPFNFD  +VG +Y GAIVG+ +TG GRA+AKGTK+MNVTV+  A N+S D N+ S +LNLSSFANLRGRVRLIH+FR+R SS I+CS+ LD
Subjt:  FAVDNSNFGPFNFDNGTVGLMYGGAIVGERSTGGGRAEAKGTKSMNVTVEGFAKNVSGDLNSTSGILNLSSFANLRGRVRLIHVFRKRISSAITCSINLD

Query:  LNTHQIQPDWVCE
        LNTHQIQ +WVCE
Subjt:  LNTHQIQPDWVCE

XP_038875090.1 late embryogenesis abundant protein At1g64065 [Benincasa hispida]4.5e-8580.19Show/hide
Query:  MADDNQSFPLAHYQAHHKSDEEQQKLSTFKTLKKERSNKCFIYVFSAFVFLSVAVLIFALIVLRVNSPTIHFSSISVAKFSISNTNSSSPSMNLTLIAEF
        M +D+QSFPLAHYQAHHKSDEEQQ L+TFKTL+KERSNKCFIYVFS FVFLSVAVLIFALIVLRVNSP+I  SS+S+ KFSI+N NSSSPS+NLT+IAEF
Subjt:  MADDNQSFPLAHYQAHHKSDEEQQKLSTFKTLKKERSNKCFIYVFSAFVFLSVAVLIFALIVLRVNSPTIHFSSISVAKFSISNTNSSSPSMNLTLIAEF

Query:  AVDNSNFGPFNFDNGTVGLMYGGAIVGERSTGGGRAEAKGTKSMNVTVEGFAKNVSGDLNSTSGILNLSSFANLRGRVRLIHVFRKRISSAITCSINLDL
         VDNSNFGPFNFDNGTVGLMYGGAIVGE+STG GRAEAKG+K MNVT+E  AKN+S D N+  GILNL+SF  LRGRVRLIH+FR+R SS ITCS+NLD+
Subjt:  AVDNSNFGPFNFDNGTVGLMYGGAIVGERSTGGGRAEAKGTKSMNVTVEGFAKNVSGDLNSTSGILNLSSFANLRGRVRLIHVFRKRISSAITCSINLDL

Query:  NTHQIQPDWVCE
        NTHQIQ +WVCE
Subjt:  NTHQIQPDWVCE

TrEMBL top hitse value%identityAlignment
A0A0A0KQT7 LEA_2 domain-containing protein4.9e-7776.17Show/hide
Query:  MADDNQSFPLAHYQAHHKSDEEQQKLSTFKTLKKERSNKCFIYVFSAFVFLSVAVLIFALIVLRVNSPTIHFSSISVAKFSIS-NTNSSSP-SMNLTLIA
        M +D+QSFPLAHYQAHHK +EEQQ L+TFK L+KERSNKCFIY+FS FVFLSVA+LIFALIVLRVNSP+I  SSIS  + S+S NTNSSSP S+NL+  A
Subjt:  MADDNQSFPLAHYQAHHKSDEEQQKLSTFKTLKKERSNKCFIYVFSAFVFLSVAVLIFALIVLRVNSPTIHFSSISVAKFSIS-NTNSSSP-SMNLTLIA

Query:  EFAVDNSNFGPFNFDNGTVGLMYGGAIVGERSTGGGRAEAKGTKSMNVTVEGFAKNVSGDLNSTSGILNLSSFANLRGRVRLIHVFRKRISSAITCSINL
        EF VDNSNFGPFNFDNGTVGL+YGG I GERSTGGGRA AKG+K MNVTVEG AKNVSG    ++GILN SSF  LRGRVRLIH+FR+R+SS I+CS+NL
Subjt:  EFAVDNSNFGPFNFDNGTVGLMYGGAIVGERSTGGGRAEAKGTKSMNVTVEGFAKNVSGDLNSTSGILNLSSFANLRGRVRLIHVFRKRISSAITCSINL

Query:  DLNTHQIQPDWVCE
        DLNTHQIQ +WVCE
Subjt:  DLNTHQIQPDWVCE

A0A1S3ATY3 late embryogenesis abundant protein At1g640658.9e-7976.64Show/hide
Query:  MADDNQSFPLAHYQAHHKSDEEQQKLSTFKTLKKERSNKCFIYVFSAFVFLSVAVLIFALIVLRVNSPTIHFSSISVAKFSISN-TNSSSP-SMNLTLIA
        M +D+QSFPLAHYQAHHK+DEEQQ L+TFKTL KERSNKCFIY+FS FVFLSVA+LIFALIVLRVNSP+I+ S++S+ KFS+SN  NSSSP S++L+  A
Subjt:  MADDNQSFPLAHYQAHHKSDEEQQKLSTFKTLKKERSNKCFIYVFSAFVFLSVAVLIFALIVLRVNSPTIHFSSISVAKFSISN-TNSSSP-SMNLTLIA

Query:  EFAVDNSNFGPFNFDNGTVGLMYGGAIVGERSTGGGRAEAKGTKSMNVTVEGFAKNVSGDLNSTSGILNLSSFANLRGRVRLIHVFRKRISSAITCSINL
         F VDNSNFGPFNFDNGTVGL+YGG I GERSTGGGRAEAKG+K MNVTVEG AKNVSG    ++GIL+LSSF  LRGRVRLIHVFR+R+SS I+CS+NL
Subjt:  EFAVDNSNFGPFNFDNGTVGLMYGGAIVGERSTGGGRAEAKGTKSMNVTVEGFAKNVSGDLNSTSGILNLSSFANLRGRVRLIHVFRKRISSAITCSINL

Query:  DLNTHQIQPDWVCE
        DLNTHQIQ +WVCE
Subjt:  DLNTHQIQPDWVCE

A0A5A7TL68 Late embryogenesis abundant protein1.2e-7876.64Show/hide
Query:  MADDNQSFPLAHYQAHHKSDEEQQKLSTFKTLKKERSNKCFIYVFSAFVFLSVAVLIFALIVLRVNSPTIHFSSISVAKFSISN-TNSSSP-SMNLTLIA
        M +D+QSFPLAHYQAHHK+DEEQQ L+TFKTL KERSNKCFIY+FS FVFLSVA+LIFALIVLRVNSP+I+ S++S+ KFS+SN  NSSSP S++L+  A
Subjt:  MADDNQSFPLAHYQAHHKSDEEQQKLSTFKTLKKERSNKCFIYVFSAFVFLSVAVLIFALIVLRVNSPTIHFSSISVAKFSISN-TNSSSP-SMNLTLIA

Query:  EFAVDNSNFGPFNFDNGTVGLMYGGAIVGERSTGGGRAEAKGTKSMNVTVEGFAKNVSGDLNSTSGILNLSSFANLRGRVRLIHVFRKRISSAITCSINL
         F VDNSNFGPFNFDNGTVGL+YGG I GERSTGGGRAEAKG+K MNVTVEG AKNVSG    ++GIL+LSSF  LRGRVRLIHVFR+R+SS I+CS+NL
Subjt:  EFAVDNSNFGPFNFDNGTVGLMYGGAIVGERSTGGGRAEAKGTKSMNVTVEGFAKNVSGDLNSTSGILNLSSFANLRGRVRLIHVFRKRISSAITCSINL

Query:  DLNTHQIQPDWVCE
        DLNTHQIQ +WVCE
Subjt:  DLNTHQIQPDWVCE

A0A6J1H2C0 uncharacterized protein LOC1114597397.1e-6870.75Show/hide
Query:  MADDNQSFPLAHYQAHHKSDEEQQKLSTFKTLKKERSNKCFIYVFSAFVFLSVAVLIFALIVLRVNSPTIHFSSISVAKFSISNTNSSSPSMNLTLIAEF
        M + + SFPL H QAHH            KT K E SNKCFIY+FS+FVFL VA+LIF+LIVLRVNSPTI  SSISV KFSISNTNSSS S+NLTLIAEF
Subjt:  MADDNQSFPLAHYQAHHKSDEEQQKLSTFKTLKKERSNKCFIYVFSAFVFLSVAVLIFALIVLRVNSPTIHFSSISVAKFSISNTNSSSPSMNLTLIAEF

Query:  AVDNSNFGPFNFDNGTVGLMYGGAIVGERSTGGGRAEAKGTKSMNVTVEGFAKNVSGDLNSTSGILNLSSFANLRGRVRLIHVFRKRISSAITCSINLDL
        ++DNSNFGPF FD  TV  MYGG IVGERSTGGGRAEAKGT  MNV+VE   +NVS DLN  SGILN+SSFA   GR+ LIHV RKRI S I+CSINLDL
Subjt:  AVDNSNFGPFNFDNGTVGLMYGGAIVGERSTGGGRAEAKGTKSMNVTVEGFAKNVSGDLNSTSGILNLSSFANLRGRVRLIHVFRKRISSAITCSINLDL

Query:  NTHQIQPDWVCE
        NTHQIQP WVC+
Subjt:  NTHQIQPDWVCE

A0A6J1I3M2 uncharacterized protein LOC1114688754.3e-8176.53Show/hide
Query:  MADDNQSFPLAHYQAHHKSDEEQQK-LSTFKTLKKERSNKCFIYVFSAFVFLSVAVLIFALIVLRVNSPTIHFSSISVAKFSISNTNSSSPSMNLTLIAE
        MADD+QSFP+AHY+AHHKSDEEQ++ L+TFK L+KERSNKCFIYVFSAFVFLSVAVLIFALIVLRVNSP +HFSS+SVAKFS+SNTNSSSPS+NLT+ A+
Subjt:  MADDNQSFPLAHYQAHHKSDEEQQK-LSTFKTLKKERSNKCFIYVFSAFVFLSVAVLIFALIVLRVNSPTIHFSSISVAKFSISNTNSSSPSMNLTLIAE

Query:  FAVDNSNFGPFNFDNGTVGLMYGGAIVGERSTGGGRAEAKGTKSMNVTVEGFAKNVSGDLNSTSGILNLSSFANLRGRVRLIHVFRKRISSAITCSINLD
         AVDNSNFGPFNFD  +VG +Y GAIVG+ +TG GRA+AKGTK+MNVTV+  A N+S D N+ S +LNLSSFANLRGRVRLIH+FR+R SS I+CS+ LD
Subjt:  FAVDNSNFGPFNFDNGTVGLMYGGAIVGERSTGGGRAEAKGTKSMNVTVEGFAKNVSGDLNSTSGILNLSSFANLRGRVRLIHVFRKRISSAITCSINLD

Query:  LNTHQIQPDWVCE
        LNTHQIQ +WVCE
Subjt:  LNTHQIQPDWVCE

SwissProt top hitse value%identityAlignment
Q6DST1 Late embryogenesis abundant protein At1g640652.5e-1431.63Show/hide
Query:  DNQSFPLAHYQAHHKSDEEQQKLSTFKTLKKERSNKCFIYVFSAFVFLSVAVLIFALIVLRVNSPTIHFSSISVAKFSISNTNSSSPSMNLTLIAEFAVD
        D     LA  + + +SDEEQ     ++   +E   KC +Y  +  V +    LI + I LR++ P I   SIS      S  NS++P  N TL+++ ++ 
Subjt:  DNQSFPLAHYQAHHKSDEEQQKLSTFKTLKKERSNKCFIYVFSAFVFLSVAVLIFALIVLRVNSPTIHFSSISVAKFSISNTNSSSPSMNLTLIAEFAVD

Query:  NSNFGPFNFDNGTVGLMYGG-AIVGERSTGGGRAEAKGTKSMN---VTVEGFAKNVSGDLNS--TSGILNLSSFANLRGRVRLIHVFRKRISSAITCSIN
        NSNFG F F++ T+ ++Y    +VGE    G R EA  T  +    V +  F    + DL+     G L L S A +RGR++++   R ++ S ++C++ 
Subjt:  NSNFGPFNFDNGTVGLMYGG-AIVGERSTGGGRAEAKGTKSMN---VTVEGFAKNVSGDLNS--TSGILNLSSFANLRGRVRLIHVFRKRISSAITCSIN

Query:  LDLNTHQIQPDWVCE
        L+L    IQ + +CE
Subjt:  LDLNTHQIQPDWVCE

Arabidopsis top hitse value%identityAlignment
AT1G64065.1 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family1.8e-1531.63Show/hide
Query:  DNQSFPLAHYQAHHKSDEEQQKLSTFKTLKKERSNKCFIYVFSAFVFLSVAVLIFALIVLRVNSPTIHFSSISVAKFSISNTNSSSPSMNLTLIAEFAVD
        D     LA  + + +SDEEQ     ++   +E   KC +Y  +  V +    LI + I LR++ P I   SIS      S  NS++P  N TL+++ ++ 
Subjt:  DNQSFPLAHYQAHHKSDEEQQKLSTFKTLKKERSNKCFIYVFSAFVFLSVAVLIFALIVLRVNSPTIHFSSISVAKFSISNTNSSSPSMNLTLIAEFAVD

Query:  NSNFGPFNFDNGTVGLMYGG-AIVGERSTGGGRAEAKGTKSMN---VTVEGFAKNVSGDLNS--TSGILNLSSFANLRGRVRLIHVFRKRISSAITCSIN
        NSNFG F F++ T+ ++Y    +VGE    G R EA  T  +    V +  F    + DL+     G L L S A +RGR++++   R ++ S ++C++ 
Subjt:  NSNFGPFNFDNGTVGLMYGG-AIVGERSTGGGRAEAKGTKSMN---VTVEGFAKNVSGDLNS--TSGILNLSSFANLRGRVRLIHVFRKRISSAITCSIN

Query:  LDLNTHQIQPDWVCE
        L+L    IQ + +CE
Subjt:  LDLNTHQIQPDWVCE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCGATGACAACCAGAGCTTTCCCTTAGCGCACTACCAAGCTCACCACAAATCTGACGAAGAGCAACAAAAACTCTCCACATTCAAAACTCTCAAAAAGGAACGATC
CAACAAATGCTTCATCTACGTTTTCTCCGCCTTCGTCTTCCTCAGCGTCGCCGTTTTGATCTTCGCTCTCATCGTCCTGCGCGTCAATTCCCCTACCATCCACTTCTCTT
CCATCTCCGTCGCTAAGTTTTCAATCTCCAACACGAATTCCTCTTCTCCTTCCATGAATCTGACCTTGATCGCGGAATTCGCCGTCGACAATTCGAACTTCGGTCCGTTT
AATTTCGATAACGGCACCGTCGGTCTCATGTACGGCGGCGCCATCGTTGGCGAGAGGAGTACCGGCGGAGGTAGGGCTGAGGCGAAAGGGACGAAGAGTATGAATGTTAC
TGTTGAAGGTTTCGCGAAGAATGTTAGCGGCGATTTGAATAGTACTTCGGGGATTTTGAATCTGAGTAGCTTCGCGAATTTGAGAGGCAGAGTTCGTTTGATTCATGTTT
TCAGGAAGAGGATTTCGTCGGCGATTACTTGTTCGATTAATCTCGATTTGAATACTCATCAAATTCAGCCTGATTGGGTTTGTGAGTGA
mRNA sequenceShow/hide mRNA sequence
CAGAGCCAAAGCTTAAAACAGACCAACGCCGGCGCATTCCAAAACTGACTCCTTCCATTCACACGAATTTCACTCCAAATCAATTCACTAACCGCTCTTCCACTCTCTCC
TATAAAATCCTCTCTTTCTCTCTCTAAAACCAAACCCTCTTCTTCTTCTTCCCCTCCCCTCTGTAACAAACAATGGCCGATGACAACCAGAGCTTTCCCTTAGCGCACTA
CCAAGCTCACCACAAATCTGACGAAGAGCAACAAAAACTCTCCACATTCAAAACTCTCAAAAAGGAACGATCCAACAAATGCTTCATCTACGTTTTCTCCGCCTTCGTCT
TCCTCAGCGTCGCCGTTTTGATCTTCGCTCTCATCGTCCTGCGCGTCAATTCCCCTACCATCCACTTCTCTTCCATCTCCGTCGCTAAGTTTTCAATCTCCAACACGAAT
TCCTCTTCTCCTTCCATGAATCTGACCTTGATCGCGGAATTCGCCGTCGACAATTCGAACTTCGGTCCGTTTAATTTCGATAACGGCACCGTCGGTCTCATGTACGGCGG
CGCCATCGTTGGCGAGAGGAGTACCGGCGGAGGTAGGGCTGAGGCGAAAGGGACGAAGAGTATGAATGTTACTGTTGAAGGTTTCGCGAAGAATGTTAGCGGCGATTTGA
ATAGTACTTCGGGGATTTTGAATCTGAGTAGCTTCGCGAATTTGAGAGGCAGAGTTCGTTTGATTCATGTTTTCAGGAAGAGGATTTCGTCGGCGATTACTTGTTCGATT
AATCTCGATTTGAATACTCATCAAATTCAGCCTGATTGGGTTTGTGAGTGACTAGATTAGAAGAATCGGAATATCATCAATGAACTCAAGAACACTAATTAGTTTACTAT
TTTTTAAATTCGTTTATTTTTTTTTTCTAATGTAGTCTGAAGTTTGTTACAAACTTACAATTTTGGAGGGGTTTTTTTTCTTTTTCTTTTTCTGCATACGATGTAAAAAT
ATGCATGTTTTAAATTTTGTGCAAGATATTTCAATTAAAAAAATACTCTCAATTCAATCTCTA
Protein sequenceShow/hide protein sequence
MADDNQSFPLAHYQAHHKSDEEQQKLSTFKTLKKERSNKCFIYVFSAFVFLSVAVLIFALIVLRVNSPTIHFSSISVAKFSISNTNSSSPSMNLTLIAEFAVDNSNFGPF
NFDNGTVGLMYGGAIVGERSTGGGRAEAKGTKSMNVTVEGFAKNVSGDLNSTSGILNLSSFANLRGRVRLIHVFRKRISSAITCSINLDLNTHQIQPDWVCE