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Tan0017007 (gene) of Snake gourd v1 genome

Gene IDTan0017007
OrganismTrichosanthes anguina (Snake gourd v1)
Descriptionarabinogalactan peptide 23-like
Genome locationLG09:57181564..57181755
RNA-Seq ExpressionTan0017007
SyntenyTan0017007
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR044702 - Arabinogalactan protein 23/40


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7018419.1 Arabinogalactan peptide 23, partial [Cucurbita argyrosperma subsp. argyrosperma]2.3e-1379.37Show/hide
Query:  MKMKKFACATLFAAVAVSTVVASNESLSPAAAPGPSSAASVALPALGSLIGASLVSFLTYILN
        M+MK  ACA LFAA AV+ VVAS+ES SPAAAPGPSSAAS ALPALGSLIGASLVSF+ Y+LN
Subjt:  MKMKKFACATLFAAVAVSTVVASNESLSPAAAPGPSSAASVALPALGSLIGASLVSFLTYILN
KAG7025661.1 Arabinogalactan peptide 23, partial [Cucurbita argyrosperma subsp. argyrosperma]8.9e-1376.19Show/hide
Query:  MKMKKFACATLFAAVAVSTVVASNESLSPAAAPGPSSAASVALPALGSLIGASLVSFLTYILN
        M+MKK ACA LFAA  V+ VVAS+ESLSPAAAPGPSSAAS ALPALGSL+GASLVSF+ +  N
Subjt:  MKMKKFACATLFAAVAVSTVVASNESLSPAAAPGPSSAASVALPALGSLIGASLVSFLTYILN
XP_023004714.1 arabinogalactan peptide 23-like [Cucurbita maxima]3.1e-1377.78Show/hide
Query:  MKMKKFACATLFAAVAVSTVVASNESLSPAAAPGPSSAASVALPALGSLIGASLVSFLTYILN
        M+MKK ACA LFAA  V+ VVAS+ESLSPAAAPGPSSAAS ALPALGSL+GASLVSF+ Y  N
Subjt:  MKMKKFACATLFAAVAVSTVVASNESLSPAAAPGPSSAASVALPALGSLIGASLVSFLTYILN
XP_023528634.1 arabinogalactan peptide 23 [Cucurbita pepo subsp. pepo]3.6e-1480.95Show/hide
Query:  MKMKKFACATLFAAVAVSTVVASNESLSPAAAPGPSSAASVALPALGSLIGASLVSFLTYILN
        M+MK  ACA LFAA AV+ VVAS+ESLSPAAAPGPSSAAS ALPALGSLIGASLVSF+ Y+LN
Subjt:  MKMKKFACATLFAAVAVSTVVASNESLSPAAAPGPSSAASVALPALGSLIGASLVSFLTYILN
XP_038899473.1 arabinogalactan protein 23-like [Benincasa hispida]1.4e-1377.78Show/hide
Query:  MKMKKFACATLFAAVAVSTVVASNESLSPAAAPGPSSAASVALPALGSLIGASLVSFLTYILN
        M+MKK ACA LFAA AVS+ VA++ESLSPAAAPGPSSAAS ALPALGSL+GASLV+F+ Y LN
Subjt:  MKMKKFACATLFAAVAVSTVVASNESLSPAAAPGPSSAASVALPALGSLIGASLVSFLTYILN
TrEMBL top hitse value%identityAlignment
A0A1S3CDX5 arabinogalactan peptide 23-like3.2e-0868.75Show/hide
Query:  MKMKKFACATLFAAVAVSTVVASNESLSPAAAPGPSSAASVALPALGSLIGASLVSFL-TYILN
        M+MKK ACA LFAA AVS  VA++ES+SPAAAPGPSSAAS ALP L    GAS+VSF+  Y LN
Subjt:  MKMKKFACATLFAAVAVSTVVASNESLSPAAAPGPSSAASVALPALGSLIGASLVSFL-TYILN
A0A6J1F3F5 arabinogalactan peptide 23-like2.1e-1274.6Show/hide
Query:  MKMKKFACATLFAAVAVSTVVASNESLSPAAAPGPSSAASVALPALGSLIGASLVSFLTYILN
        M+MKK ACA LFAA  V+ VVAS+ESLSPAAAPGPSSAAS  LPALGSL+GASLVS + Y  N
Subjt:  MKMKKFACATLFAAVAVSTVVASNESLSPAAAPGPSSAASVALPALGSLIGASLVSFLTYILN
A0A6J1H8I1 arabinogalactan peptide 23-like9.6e-1374.6Show/hide
Query:  MKMKKFACATLFAAVAVSTVVASNESLSPAAAPGPSSAASVALPALGSLIGASLVSFLTYILN
        M+MKK ACA LFAA  ++ VVAS+ESLSPAAAPGPSSAAS ALPALGSL+GASLVSF+ +  N
Subjt:  MKMKKFACATLFAAVAVSTVVASNESLSPAAAPGPSSAASVALPALGSLIGASLVSFLTYILN
A0A6J1IYE9 arabinogalactan peptide 23-like9.6e-1376.19Show/hide
Query:  MKMKKFACATLFAAVAVSTVVASNESLSPAAAPGPSSAASVALPALGSLIGASLVSFLTYILN
        M+MK  AC  LF A AV+ VVAS+ES SPAAAPGPSSAAS ALPALGSLIGASLVSF+ Y+LN
Subjt:  MKMKKFACATLFAAVAVSTVVASNESLSPAAAPGPSSAASVALPALGSLIGASLVSFLTYILN
A0A6J1KX42 arabinogalactan peptide 23-like1.5e-1377.78Show/hide
Query:  MKMKKFACATLFAAVAVSTVVASNESLSPAAAPGPSSAASVALPALGSLIGASLVSFLTYILN
        M+MKK ACA LFAA  V+ VVAS+ESLSPAAAPGPSSAAS ALPALGSL+GASLVSF+ Y  N
Subjt:  MKMKKFACATLFAAVAVSTVVASNESLSPAAAPGPSSAASVALPALGSLIGASLVSFLTYILN
SwissProt top hitse value%identityAlignment
Q8S2W4 Arabinogalactan protein 232.1e-0960.32Show/hide
Query:  MKMKKFACATLFAAVAVSTVVASNESLSPAAAPGPSSAASVALPALGSLIGASLVSFLTYILN
        M+MKK AC  LFAA +++ V+A+ E  +P  APGP+SAAS ALPALGSL+GASLVS  +Y L+
Subjt:  MKMKKFACATLFAAVAVSTVVASNESLSPAAAPGPSSAASVALPALGSLIGASLVSFLTYILN
Arabidopsis top hitse value%identityAlignment
AT2G41905.1 BEST Arabidopsis thaliana protein match is: arabinogalactan protein 23 (TAIR:AT3G57690.1)5.4e-0856.25Show/hide
Query:  MKMKKFACATLFAAVAVSTVVASNESLSPAAAPGP-SSAASVALPALGSLIGASLVSFLTYILN
        M+MKK AC  +FAA +++ V+A+      A APGP +S ASVA+PALGSL+GASLVS   Y LN
Subjt:  MKMKKFACATLFAAVAVSTVVASNESLSPAAAPGP-SSAASVALPALGSLIGASLVSFLTYILN
AT3G20865.1 arabinogalactan protein 406.2e-0446.77Show/hide
Query:  MKMKKFACATLFAAVAVSTVVASNESLSPAAAPGPSSAASVALPALGSLIGASLVSFLTYIL
        M+MK    A   +AV VS+V A+    SPA +PG SSA++VA P +GS++ ASL +FL  +L
Subjt:  MKMKKFACATLFAAVAVSTVVASNESLSPAAAPGPSSAASVALPALGSLIGASLVSFLTYIL
AT3G57690.1 arabinogalactan protein 231.5e-1060.32Show/hide
Query:  MKMKKFACATLFAAVAVSTVVASNESLSPAAAPGPSSAASVALPALGSLIGASLVSFLTYILN
        M+MKK AC  LFAA +++ V+A+ E  +P  APGP+SAAS ALPALGSL+GASLVS  +Y L+
Subjt:  MKMKKFACATLFAAVAVSTVVASNESLSPAAAPGPSSAASVALPALGSLIGASLVSFLTYILN

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAATGAAGAAGTTTGCCTGTGCCACCCTCTTTGCTGCTGTTGCAGTCAGCACAGTCGTGGCCTCCAATGAGTCTCTCTCTCCTGCCGCCGCACCCGGGCCGAGTAG
TGCCGCCTCTGTCGCTCTTCCCGCCCTTGGATCGCTAATTGGTGCCTCACTTGTTTCCTTCCTTACCTACATCTTGAATTGA
mRNA sequenceShow/hide mRNA sequence
ATGAAAATGAAGAAGTTTGCCTGTGCCACCCTCTTTGCTGCTGTTGCAGTCAGCACAGTCGTGGCCTCCAATGAGTCTCTCTCTCCTGCCGCCGCACCCGGGCCGAGTAG
TGCCGCCTCTGTCGCTCTTCCCGCCCTTGGATCGCTAATTGGTGCCTCACTTGTTTCCTTCCTTACCTACATCTTGAATTGA
Protein sequenceShow/hide protein sequence
MKMKKFACATLFAAVAVSTVVASNESLSPAAAPGPSSAASVALPALGSLIGASLVSFLTYILN