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Tan0017045 (gene) of Snake gourd v1 genome

Gene IDTan0017045
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionB3 domain-containing transcription repressor VAL2
Genome locationLG01:43343547..43346361
RNA-Seq ExpressionTan0017045
SyntenyTan0017045
Gene Ontology termsGO:0005634 - nucleus (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7027860.1 B3 domain-containing protein [Cucurbita argyrosperma subsp. argyrosperma]3.5e-1980.33Show/hide
Query:  NPIRPGSRCLHLIPKPAHASFDAGLEPNASMVSQVHVARPPAEGRGQNQLLPRYWPRITDQ
        +P+  GSR  HLIPKPA A F+ GLEPNASMVSQV VARPPAEGRG+NQLLPRYWPRITDQ
Subjt:  NPIRPGSRCLHLIPKPAHASFDAGLEPNASMVSQVHVARPPAEGRGQNQLLPRYWPRITDQ
XP_022157278.1 B3 domain-containing transcription repressor VAL2 isoform X1 [Momordica charantia]1.0e-1878.69Show/hide
Query:  NPIRPGSRCLHLIPKPAHASFDAGLEPNASMVSQVHVARPPAEGRGQNQLLPRYWPRITDQ
        +P+  GSR  HLIPKPA + F+ GLEPNASMVSQV VARPPAEGRG+NQLLPRYWPRITDQ
Subjt:  NPIRPGSRCLHLIPKPAHASFDAGLEPNASMVSQVHVARPPAEGRGQNQLLPRYWPRITDQ
XP_022938001.1 B3 domain-containing transcription repressor VAL2 isoform X1 [Cucurbita moschata]3.5e-1980.33Show/hide
Query:  NPIRPGSRCLHLIPKPAHASFDAGLEPNASMVSQVHVARPPAEGRGQNQLLPRYWPRITDQ
        +P+  GSR  HLIPKPA A F+ GLEPNASMVSQV VARPPAEGRG+NQLLPRYWPRITDQ
Subjt:  NPIRPGSRCLHLIPKPAHASFDAGLEPNASMVSQVHVARPPAEGRGQNQLLPRYWPRITDQ
XP_022971286.1 B3 domain-containing transcription repressor VAL2 isoform X1 [Cucurbita maxima]3.5e-1980.33Show/hide
Query:  NPIRPGSRCLHLIPKPAHASFDAGLEPNASMVSQVHVARPPAEGRGQNQLLPRYWPRITDQ
        +P+  GSR  HLIPKPA A F+ GLEPNASMVSQV VARPPAEGRG+NQLLPRYWPRITDQ
Subjt:  NPIRPGSRCLHLIPKPAHASFDAGLEPNASMVSQVHVARPPAEGRGQNQLLPRYWPRITDQ
XP_023540681.1 B3 domain-containing transcription repressor VAL2 isoform X1 [Cucurbita pepo subsp. pepo]3.5e-1980.33Show/hide
Query:  NPIRPGSRCLHLIPKPAHASFDAGLEPNASMVSQVHVARPPAEGRGQNQLLPRYWPRITDQ
        +P+  GSR  HLIPKPA A F+ GLEPNASMVSQV VARPPAEGRG+NQLLPRYWPRITDQ
Subjt:  NPIRPGSRCLHLIPKPAHASFDAGLEPNASMVSQVHVARPPAEGRGQNQLLPRYWPRITDQ
TrEMBL top hitse value%identityAlignment
A0A6J1DSN4 B3 domain-containing protein Os07g0679700 isoform X25.0e-1978.69Show/hide
Query:  NPIRPGSRCLHLIPKPAHASFDAGLEPNASMVSQVHVARPPAEGRGQNQLLPRYWPRITDQ
        +P+  GSR  HLIPKPA + F+ GLEPNASMVSQV VARPPAEGRG+NQLLPRYWPRITDQ
Subjt:  NPIRPGSRCLHLIPKPAHASFDAGLEPNASMVSQVHVARPPAEGRGQNQLLPRYWPRITDQ
A0A6J1DSY7 B3 domain-containing transcription repressor VAL2 isoform X15.0e-1978.69Show/hide
Query:  NPIRPGSRCLHLIPKPAHASFDAGLEPNASMVSQVHVARPPAEGRGQNQLLPRYWPRITDQ
        +P+  GSR  HLIPKPA + F+ GLEPNASMVSQV VARPPAEGRG+NQLLPRYWPRITDQ
Subjt:  NPIRPGSRCLHLIPKPAHASFDAGLEPNASMVSQVHVARPPAEGRGQNQLLPRYWPRITDQ
A0A6J1FBY4 B3 domain-containing transcription repressor VAL2 isoform X11.7e-1980.33Show/hide
Query:  NPIRPGSRCLHLIPKPAHASFDAGLEPNASMVSQVHVARPPAEGRGQNQLLPRYWPRITDQ
        +P+  GSR  HLIPKPA A F+ GLEPNASMVSQV VARPPAEGRG+NQLLPRYWPRITDQ
Subjt:  NPIRPGSRCLHLIPKPAHASFDAGLEPNASMVSQVHVARPPAEGRGQNQLLPRYWPRITDQ
A0A6J1I1J6 B3 domain-containing transcription repressor VAL2 isoform X26.5e-1985.71Show/hide
Query:  GSRCLHLIPKPAHASFDAGLEPNASMVSQVHVARPPAEGRGQNQLLPRYWPRITDQ
        GSR  HLIPKPA A F+ GLEPNASMVSQV VARPPAEGRG+NQLLPRYWPRITDQ
Subjt:  GSRCLHLIPKPAHASFDAGLEPNASMVSQVHVARPPAEGRGQNQLLPRYWPRITDQ
A0A6J1I2X3 B3 domain-containing transcription repressor VAL2 isoform X11.7e-1980.33Show/hide
Query:  NPIRPGSRCLHLIPKPAHASFDAGLEPNASMVSQVHVARPPAEGRGQNQLLPRYWPRITDQ
        +P+  GSR  HLIPKPA A F+ GLEPNASMVSQV VARPPAEGRG+NQLLPRYWPRITDQ
Subjt:  NPIRPGSRCLHLIPKPAHASFDAGLEPNASMVSQVHVARPPAEGRGQNQLLPRYWPRITDQ
SwissProt top hitse value%identityAlignment
Q5CCK4 B3 domain-containing transcription repressor VAL22.5e-1569.09Show/hide
Query:  RCLHLIPKPAH-ASFDAGLEPNASMVSQVHVARPPAEGRGQNQLLPRYWPRITDQ
        R   L+PKPA+ A   AG+EP+ S+VSQ+HVARPP EGRG+ QLLPRYWPRITDQ
Subjt:  RCLHLIPKPAH-ASFDAGLEPNASMVSQVHVARPPAEGRGQNQLLPRYWPRITDQ
Q6Z3U3 B3 domain-containing protein Os07g06797003.3e-1250.82Show/hide
Query:  NPIRPGSRCLHLIPKPAHASFDAGLEPNASMVSQVHVARPPAEGRGQNQLLPRYWPRITDQ
        +P +   R  H + +P      A  +P   M+  + VARPPAEGRG+NQLLPRYWPRITDQ
Subjt:  NPIRPGSRCLHLIPKPAHASFDAGLEPNASMVSQVHVARPPAEGRGQNQLLPRYWPRITDQ
Q8W4L5 B3 domain-containing transcription repressor VAL14.7e-0643.14Show/hide
Query:  HLIPKPAHASFDAGLEPNASMVSQVHVARPPAEGRGQNQLLPRYWPRITDQ
        +++ KP+  +      P AS  +Q  + RPP EGRG+  LLPRYWP+ TD+
Subjt:  HLIPKPAHASFDAGLEPNASMVSQVHVARPPAEGRGQNQLLPRYWPRITDQ
Arabidopsis top hitse value%identityAlignment
AT2G30470.1 high-level expression of sugar-inducible gene 23.3e-0743.14Show/hide
Query:  HLIPKPAHASFDAGLEPNASMVSQVHVARPPAEGRGQNQLLPRYWPRITDQ
        +++ KP+  +      P AS  +Q  + RPP EGRG+  LLPRYWP+ TD+
Subjt:  HLIPKPAHASFDAGLEPNASMVSQVHVARPPAEGRGQNQLLPRYWPRITDQ
AT4G32010.1 HSI2-like 11.7e-1669.09Show/hide
Query:  RCLHLIPKPAH-ASFDAGLEPNASMVSQVHVARPPAEGRGQNQLLPRYWPRITDQ
        R   L+PKPA+ A   AG+EP+ S+VSQ+HVARPP EGRG+ QLLPRYWPRITDQ
Subjt:  RCLHLIPKPAH-ASFDAGLEPNASMVSQVHVARPPAEGRGQNQLLPRYWPRITDQ

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGCTGCAATTTGCGGTCGAGTACCTCTTTCACCCAACCATTTCTTCAATCCGATCAGGCCAGGTTCTAGATGTCTTCATCTTATTCCGAAGCCTGCACATGCATC
ATTTGATGCAGGCTTAGAGCCAAATGCTAGCATGGTTTCACAAGTGCATGTAGCAAGACCACCTGCTGAAGGGAGGGGACAGAATCAATTGCTTCCTCGTTATTGGCCTA
GGATCACTGACCAATAG
mRNA sequenceShow/hide mRNA sequence
ATGGAAGCTGCAATTTGCGGTCGAGTACCTCTTTCACCCAACCATTTCTTCAATCCGATCAGGCCAGGTTCTAGATGTCTTCATCTTATTCCGAAGCCTGCACATGCATC
ATTTGATGCAGGCTTAGAGCCAAATGCTAGCATGGTTTCACAAGTGCATGTAGCAAGACCACCTGCTGAAGGGAGGGGACAGAATCAATTGCTTCCTCGTTATTGGCCTA
GGATCACTGACCAATAG
Protein sequenceShow/hide protein sequence
MEAAICGRVPLSPNHFFNPIRPGSRCLHLIPKPAHASFDAGLEPNASMVSQVHVARPPAEGRGQNQLLPRYWPRITDQ