| GenBank top hits | e value | %identity | Alignment |
|---|
| KAA0059226.1 gag/pol protein [Cucumis melo var. makuwa] | 1.9e-128 | 56.02 | Show/hide |
Query: PSPPKGKKKMKR----GKTDRAAAQKGKKTKEVAEKGKCFHCNGGGHWKRNCSKFLGEKKNQ--------------------------------------
PSP +K KR GK A + K K VA K KCFHCN HWK NC K+L +KK +
Subjt: PSPPKGKKKMKR----GKTDRAAAQKGKKTKEVAEKGKCFHCNGGGHWKRNCSKFLGEKKNQ--------------------------------------
Query: -------GHINLNRIEKLVNSGLLNELEENFSPVCESCLEGKMTKCPFSGKGYRAEEPLELIHSDLCGPMNIKARGGYEYFVSFIDYYSRYGHTYLMHKK
GHINL+RI +LV +GLLN+L++ P CESCLEGKMTK PF+GKGYRA+EPLELIHSDLCGPMN+KARGG+EYF+SFID YSRYG+ YLM K
Subjt: -------GHINLNRIEKLVNSGLLNELEENFSPVCESCLEGKMTKCPFSGKGYRAEEPLELIHSDLCGPMNIKARGGYEYFVSFIDYYSRYGHTYLMHKK
Query: SETLEKFKEYKTEVENLLGKSLKTHRSDRGGEYMDTEFQDYMIEHEITSQLSAPGMPQQNGISERRNRTLLDMVRSTMSYARLPDSFWGYAVETAVYILN
SE LEKFKEYKTEVENLL K +K RSDRGGEYMD FQDYMIEH I SQLSAPG PQQNG+SERRNRTLLDMVRS MSYA+LP SFWGYAVETAV+ILN
Subjt: SETLEKFKEYKTEVENLLGKSLKTHRSDRGGEYMDTEFQDYMIEHEITSQLSAPGMPQQNGISERRNRTLLDMVRSTMSYARLPDSFWGYAVETAVYILN
Query: NNLGMPDPCVGVKPEKV--------------GTPFEILP---------------IRYPKETRGGLCFYPKDNRVLVSTNATFLEENHIRDHLPRSKMVLN
N +P V P ++ G P +L + YPKETRGGL F P++NRV VSTNATFLEE+H+R+H PRSK+VL+
Subjt: NNLGMPDPCVGVKPEKV--------------GTPFEILP---------------IRYPKETRGGLCFYPKDNRVLVSTNATFLEENHIRDHLPRSKMVLN
Query: EIDSTSARVADGASTSTSVVDPITSSQIR-SQELGMPQRSGRVVRQPDRYMGLAETPVVTPDDDCEDPLTYDQAMVDVDKDE
E S RV D S+ V + TS Q SQ L MP+RSGRVV QP+RY+GL ET VV PDD EDPL+Y QAM DVDKD+
Subjt: EIDSTSARVADGASTSTSVVDPITSSQIR-SQELGMPQRSGRVVRQPDRYMGLAETPVVTPDDDCEDPLTYDQAMVDVDKDE
|
|
| KAA0060254.1 gag/pol protein [Cucumis melo var. makuwa] | 2.0e-130 | 58.12 | Show/hide |
Query: EAEANVA--IRSYHRGWTSGTKPVAPSPPKGKKKMKRG----KTDRAAAQKGKKTKEVAEKGKCFHCNGGGHWKRNCSKFLGEKK--NQGHINLNRIEKL
+ EANVA R +HRG TSGTK + S K K K+G K + AAA+ KK+K A KG CFH N GHWKRNC K+L EKK QGHINLNRIE+L
Subjt: EAEANVA--IRSYHRGWTSGTKPVAPSPPKGKKKMKRG----KTDRAAAQKGKKTKEVAEKGKCFHCNGGGHWKRNCSKFLGEKK--NQGHINLNRIEKL
Query: VNSGLLNELEENFSPVCESCLEGKMTKCPFSGKGYRAEEPLELIHSDLCGPMNIKARGGYEYFVSFIDYYSRYGHTYLMHKKSETLEKFKEYKTEVENLL
V +G+L+ELEEN P+CESCLEGKMTK PF+GKG+RA+EPLEL+HSDLCGPMN+KARG +EYF++F D YSRYG+ YLM KSE LEKFKEYK EVEN L
Subjt: VNSGLLNELEENFSPVCESCLEGKMTKCPFSGKGYRAEEPLELIHSDLCGPMNIKARGGYEYFVSFIDYYSRYGHTYLMHKKSETLEKFKEYKTEVENLL
Query: GKSLKTHRSDRGGEYMDTEFQDYMIEHEITSQLSAPGMPQQNGISERRNRTLLDMVRSTMSYARLPDSFWGYAVETAVYILNNNLGMPDPCVGVKPEKV-
K++KT RSDRGGEYMD +FQ+Y++E EI SQLSAPG PQQNG+SERRNRTLLDMVRS +SYA LP+SFWGYAV+TAVYILN +P V P K+
Subjt: GKSLKTHRSDRGGEYMDTEFQDYMIEHEITSQLSAPGMPQQNGISERRNRTLLDMVRSTMSYARLPDSFWGYAVETAVYILNNNLGMPDPCVGVKPEKV-
Query: -------------GTPFEILP---------------IRYPKETRGGLCFYPKDNRVLVSTNATFLEENHIRDHLPRSKMVLN----EIDSTSARVADGAS
G P +L + YPK TRGG + KDN+V V TNATFLE++HIR+H PRSK+VLN EI S RV + +S
Subjt: -------------GTPFEILP---------------IRYPKETRGGLCFYPKDNRVLVSTNATFLEENHIRDHLPRSKMVLN----EIDSTSARVADGAS
Query: TSTSVVDPITSSQ-IRSQELGMPQRSGRVVRQPDRYMGLAETPVVTPDDDCEDPLTYDQAMVDVDKDE
T VV +S++ + Q L P+RSGRV P RYM L ET V D D EDPLT+ +AM DVDKDE
Subjt: TSTSVVDPITSSQ-IRSQELGMPQRSGRVVRQPDRYMGLAETPVVTPDDDCEDPLTYDQAMVDVDKDE
|
|
| TYJ96910.1 gag/pol protein [Cucumis melo var. makuwa] | 1.5e-138 | 56.48 | Show/hide |
Query: MNTINYSLTTLLNELQTFQSLMRIRTSEAEANVA--IRSYHRGWTSGTKPVAPSPPKGKKKMKRG----KTDRAAAQKGKKTKEVAEKGKCFHCNGGGHW
MN I+Y+LTTLLNELQTF+SLM+I+ + EANVA R +HRG TSGTK + S K K +G K + AAA+ KK K A KG FHCN GHW
Subjt: MNTINYSLTTLLNELQTFQSLMRIRTSEAEANVA--IRSYHRGWTSGTKPVAPSPPKGKKKMKRG----KTDRAAAQKGKKTKEVAEKGKCFHCNGGGHW
Query: KRNCSKFLGEKKNQG------------------------HINLNRIEKLVNSGLLNELEENFSPVCESCLEGKMTKCPFSGKGYRAEEPLELIHSDLCGP
KRNC K+L EKK HINLNRIE+LV +GLL+ELEEN+ PVCESCLEGKMTK PF+GKG+RA+EPLEL+HSDLCGP
Subjt: KRNCSKFLGEKKNQG------------------------HINLNRIEKLVNSGLLNELEENFSPVCESCLEGKMTKCPFSGKGYRAEEPLELIHSDLCGP
Query: MNIKARGGYEYFVSFIDYYSRYGHTYLMHKKSETLEKFKEYKTEVENLLGKSLKTHRSDRGGEYMDTEFQDYMIEHEITSQLSAPGMPQQNGISERRNRT
MN+KARGG+EYF++F D YSRYG+ YLM KSE LEKFKEYK EVEN L K++KT RSDRGGEYMD +FQ+Y++E I SQLSAPG PQQNG+SERRN+T
Subjt: MNIKARGGYEYFVSFIDYYSRYGHTYLMHKKSETLEKFKEYKTEVENLLGKSLKTHRSDRGGEYMDTEFQDYMIEHEITSQLSAPGMPQQNGISERRNRT
Query: LLDMVRSTMSYARLPDSFWGYAVETAVYILNNNLGMPDPCVGVKPEKV--------------GTPFEILPIR---------------YPKETRGGLCFYP
LLDMV S MSYA LP+SFWGYAV+TAVYILN +P V P K+ G P +L I Y K +RGG + P
Subjt: LLDMVRSTMSYARLPDSFWGYAVETAVYILNNNLGMPDPCVGVKPEKV--------------GTPFEILPIR---------------YPKETRGGLCFYP
Query: KDNRVLVSTNATFLEENHIRDHLPRSKMVLNEIDS----TSARVADGASTSTSVVDPITSSQI-RSQELGMPQRSGRVVRQPDRYMGLAETPVVTPDDDC
KDN+VLVSTNATFLEE+HIR+H PRSK+VLNE+ + S RV + S TSVV +S++ + Q L P+RSGRV P RYM L ET V D D
Subjt: KDNRVLVSTNATFLEENHIRDHLPRSKMVLNEIDS----TSARVADGASTSTSVVDPITSSQI-RSQELGMPQRSGRVVRQPDRYMGLAETPVVTPDDDC
Query: EDPLTYDQAMVDVDKDE
EDPLT+ +AM DVDKDE
Subjt: EDPLTYDQAMVDVDKDE
|
|
| TYJ97618.1 gag/pol protein [Cucumis melo var. makuwa] | 9.5e-133 | 58.55 | Show/hide |
Query: EAEANVA--IRSYHRGWTSGTKPVAPSPPKGKKKMKRG----KTDRAAAQKGKKTKEVAEKGKCFHCNGGGHWKRNCSKFLGEKK--NQGHINLNRIEKL
+ EANVA R +HRG TSGTK + S K K K+G K + AAA+ KK+K A KG CFH N GHWKRNC K+L EKK QGHINLNRIE+L
Subjt: EAEANVA--IRSYHRGWTSGTKPVAPSPPKGKKKMKRG----KTDRAAAQKGKKTKEVAEKGKCFHCNGGGHWKRNCSKFLGEKK--NQGHINLNRIEKL
Query: VNSGLLNELEENFSPVCESCLEGKMTKCPFSGKGYRAEEPLELIHSDLCGPMNIKARGGYEYFVSFIDYYSRYGHTYLMHKKSETLEKFKEYKTEVENLL
V +G+L+ELEEN P+CESCLEGKMTK PF+GKG+RA+EPLEL+HSDLCGPMN+KARG +EYF++F D YSRYG+ YLM KSE LEKFKEYK EVEN L
Subjt: VNSGLLNELEENFSPVCESCLEGKMTKCPFSGKGYRAEEPLELIHSDLCGPMNIKARGGYEYFVSFIDYYSRYGHTYLMHKKSETLEKFKEYKTEVENLL
Query: GKSLKTHRSDRGGEYMDTEFQDYMIEHEITSQLSAPGMPQQNGISERRNRTLLDMVRSTMSYARLPDSFWGYAVETAVYILNNNLGMPDPCVGVKPEKV-
K++KT RSDRGGEYMD +FQ+Y++E EI SQLSAPG PQQNG+SERRNRTLLDMVRS +SYA LP+SFWGYAV+TAVYILN +P V P K+
Subjt: GKSLKTHRSDRGGEYMDTEFQDYMIEHEITSQLSAPGMPQQNGISERRNRTLLDMVRSTMSYARLPDSFWGYAVETAVYILNNNLGMPDPCVGVKPEKV-
Query: -------------GTPFEILP---------------IRYPKETRGGLCFYPKDNRVLVSTNATFLEENHIRDHLPRSKMVLNEID----STSARVADGAS
G P +L + YPK TRGG + PKDN+V VSTNATFLEE+HIR+H PRSK+VLNE+ S RV + S
Subjt: -------------GTPFEILP---------------IRYPKETRGGLCFYPKDNRVLVSTNATFLEENHIRDHLPRSKMVLNEID----STSARVADGAS
Query: TSTSVVDPITSSQI-RSQELGMPQRSGRVVRQPDRYMGLAETPVVTPDDDCEDPLTYDQAMVDVDKDE
T VV +S++ + Q L P+RSGRV P RYM L ET V D D EDPLT+ +AM DVDKDE
Subjt: TSTSVVDPITSSQI-RSQELGMPQRSGRVVRQPDRYMGLAETPVVTPDDDCEDPLTYDQAMVDVDKDE
|
|
| TYK02840.1 gag/pol protein [Cucumis melo var. makuwa] | 1.9e-128 | 56.02 | Show/hide |
Query: PSPPKGKKKMKR----GKTDRAAAQKGKKTKEVAEKGKCFHCNGGGHWKRNCSKFLGEKKNQ--------------------------------------
PSP +K KR GK A + K K VA K KCFHCN HWK NC K+L +KK +
Subjt: PSPPKGKKKMKR----GKTDRAAAQKGKKTKEVAEKGKCFHCNGGGHWKRNCSKFLGEKKNQ--------------------------------------
Query: -------GHINLNRIEKLVNSGLLNELEENFSPVCESCLEGKMTKCPFSGKGYRAEEPLELIHSDLCGPMNIKARGGYEYFVSFIDYYSRYGHTYLMHKK
GHINL+RI +LV +GLLN+L++ P CESCLEGKMTK PF+GKGYRA+EPLELIHSDLCGPMN+KARGG+EYF+SFID YSRYG+ YLM K
Subjt: -------GHINLNRIEKLVNSGLLNELEENFSPVCESCLEGKMTKCPFSGKGYRAEEPLELIHSDLCGPMNIKARGGYEYFVSFIDYYSRYGHTYLMHKK
Query: SETLEKFKEYKTEVENLLGKSLKTHRSDRGGEYMDTEFQDYMIEHEITSQLSAPGMPQQNGISERRNRTLLDMVRSTMSYARLPDSFWGYAVETAVYILN
SE LEKFKEYKTEVENLL K +K RSDRGGEYMD FQDYMIEH I SQLSAPG PQQNG+SERRNRTLLDMVRS MSYA+LP SFWGYAVETAV+ILN
Subjt: SETLEKFKEYKTEVENLLGKSLKTHRSDRGGEYMDTEFQDYMIEHEITSQLSAPGMPQQNGISERRNRTLLDMVRSTMSYARLPDSFWGYAVETAVYILN
Query: NNLGMPDPCVGVKPEKV--------------GTPFEILP---------------IRYPKETRGGLCFYPKDNRVLVSTNATFLEENHIRDHLPRSKMVLN
N +P V P ++ G P +L + YPKETRGGL F P++NRV VSTNATFLEE+H+R+H PRSK+VL+
Subjt: NNLGMPDPCVGVKPEKV--------------GTPFEILP---------------IRYPKETRGGLCFYPKDNRVLVSTNATFLEENHIRDHLPRSKMVLN
Query: EIDSTSARVADGASTSTSVVDPITSSQIR-SQELGMPQRSGRVVRQPDRYMGLAETPVVTPDDDCEDPLTYDQAMVDVDKDE
E S RV D S+ V + TS Q SQ L MP+RSGRVV QP+RY+GL ET VV PDD EDPL+Y QAM DVDKD+
Subjt: EIDSTSARVADGASTSTSVVDPITSSQIR-SQELGMPQRSGRVVRQPDRYMGLAETPVVTPDDDCEDPLTYDQAMVDVDKDE
|
|
| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7UYE8 Gag/pol protein | 9.0e-129 | 56.02 | Show/hide |
Query: PSPPKGKKKMKR----GKTDRAAAQKGKKTKEVAEKGKCFHCNGGGHWKRNCSKFLGEKKNQ--------------------------------------
PSP +K KR GK A + K K VA K KCFHCN HWK NC K+L +KK +
Subjt: PSPPKGKKKMKR----GKTDRAAAQKGKKTKEVAEKGKCFHCNGGGHWKRNCSKFLGEKKNQ--------------------------------------
Query: -------GHINLNRIEKLVNSGLLNELEENFSPVCESCLEGKMTKCPFSGKGYRAEEPLELIHSDLCGPMNIKARGGYEYFVSFIDYYSRYGHTYLMHKK
GHINL+RI +LV +GLLN+L++ P CESCLEGKMTK PF+GKGYRA+EPLELIHSDLCGPMN+KARGG+EYF+SFID YSRYG+ YLM K
Subjt: -------GHINLNRIEKLVNSGLLNELEENFSPVCESCLEGKMTKCPFSGKGYRAEEPLELIHSDLCGPMNIKARGGYEYFVSFIDYYSRYGHTYLMHKK
Query: SETLEKFKEYKTEVENLLGKSLKTHRSDRGGEYMDTEFQDYMIEHEITSQLSAPGMPQQNGISERRNRTLLDMVRSTMSYARLPDSFWGYAVETAVYILN
SE LEKFKEYKTEVENLL K +K RSDRGGEYMD FQDYMIEH I SQLSAPG PQQNG+SERRNRTLLDMVRS MSYA+LP SFWGYAVETAV+ILN
Subjt: SETLEKFKEYKTEVENLLGKSLKTHRSDRGGEYMDTEFQDYMIEHEITSQLSAPGMPQQNGISERRNRTLLDMVRSTMSYARLPDSFWGYAVETAVYILN
Query: NNLGMPDPCVGVKPEKV--------------GTPFEILP---------------IRYPKETRGGLCFYPKDNRVLVSTNATFLEENHIRDHLPRSKMVLN
N +P V P ++ G P +L + YPKETRGGL F P++NRV VSTNATFLEE+H+R+H PRSK+VL+
Subjt: NNLGMPDPCVGVKPEKV--------------GTPFEILP---------------IRYPKETRGGLCFYPKDNRVLVSTNATFLEENHIRDHLPRSKMVLN
Query: EIDSTSARVADGASTSTSVVDPITSSQIR-SQELGMPQRSGRVVRQPDRYMGLAETPVVTPDDDCEDPLTYDQAMVDVDKDE
E S RV D S+ V + TS Q SQ L MP+RSGRVV QP+RY+GL ET VV PDD EDPL+Y QAM DVDKD+
Subjt: EIDSTSARVADGASTSTSVVDPITSSQIR-SQELGMPQRSGRVVRQPDRYMGLAETPVVTPDDDCEDPLTYDQAMVDVDKDE
|
|
| A0A5A7UYX7 Gag/pol protein | 9.6e-131 | 58.12 | Show/hide |
Query: EAEANVA--IRSYHRGWTSGTKPVAPSPPKGKKKMKRG----KTDRAAAQKGKKTKEVAEKGKCFHCNGGGHWKRNCSKFLGEKK--NQGHINLNRIEKL
+ EANVA R +HRG TSGTK + S K K K+G K + AAA+ KK+K A KG CFH N GHWKRNC K+L EKK QGHINLNRIE+L
Subjt: EAEANVA--IRSYHRGWTSGTKPVAPSPPKGKKKMKRG----KTDRAAAQKGKKTKEVAEKGKCFHCNGGGHWKRNCSKFLGEKK--NQGHINLNRIEKL
Query: VNSGLLNELEENFSPVCESCLEGKMTKCPFSGKGYRAEEPLELIHSDLCGPMNIKARGGYEYFVSFIDYYSRYGHTYLMHKKSETLEKFKEYKTEVENLL
V +G+L+ELEEN P+CESCLEGKMTK PF+GKG+RA+EPLEL+HSDLCGPMN+KARG +EYF++F D YSRYG+ YLM KSE LEKFKEYK EVEN L
Subjt: VNSGLLNELEENFSPVCESCLEGKMTKCPFSGKGYRAEEPLELIHSDLCGPMNIKARGGYEYFVSFIDYYSRYGHTYLMHKKSETLEKFKEYKTEVENLL
Query: GKSLKTHRSDRGGEYMDTEFQDYMIEHEITSQLSAPGMPQQNGISERRNRTLLDMVRSTMSYARLPDSFWGYAVETAVYILNNNLGMPDPCVGVKPEKV-
K++KT RSDRGGEYMD +FQ+Y++E EI SQLSAPG PQQNG+SERRNRTLLDMVRS +SYA LP+SFWGYAV+TAVYILN +P V P K+
Subjt: GKSLKTHRSDRGGEYMDTEFQDYMIEHEITSQLSAPGMPQQNGISERRNRTLLDMVRSTMSYARLPDSFWGYAVETAVYILNNNLGMPDPCVGVKPEKV-
Query: -------------GTPFEILP---------------IRYPKETRGGLCFYPKDNRVLVSTNATFLEENHIRDHLPRSKMVLN----EIDSTSARVADGAS
G P +L + YPK TRGG + KDN+V V TNATFLE++HIR+H PRSK+VLN EI S RV + +S
Subjt: -------------GTPFEILP---------------IRYPKETRGGLCFYPKDNRVLVSTNATFLEENHIRDHLPRSKMVLN----EIDSTSARVADGAS
Query: TSTSVVDPITSSQ-IRSQELGMPQRSGRVVRQPDRYMGLAETPVVTPDDDCEDPLTYDQAMVDVDKDE
T VV +S++ + Q L P+RSGRV P RYM L ET V D D EDPLT+ +AM DVDKDE
Subjt: TSTSVVDPITSSQ-IRSQELGMPQRSGRVVRQPDRYMGLAETPVVTPDDDCEDPLTYDQAMVDVDKDE
|
|
| A0A5D3BAN6 Gag/pol protein | 7.3e-139 | 56.48 | Show/hide |
Query: MNTINYSLTTLLNELQTFQSLMRIRTSEAEANVA--IRSYHRGWTSGTKPVAPSPPKGKKKMKRG----KTDRAAAQKGKKTKEVAEKGKCFHCNGGGHW
MN I+Y+LTTLLNELQTF+SLM+I+ + EANVA R +HRG TSGTK + S K K +G K + AAA+ KK K A KG FHCN GHW
Subjt: MNTINYSLTTLLNELQTFQSLMRIRTSEAEANVA--IRSYHRGWTSGTKPVAPSPPKGKKKMKRG----KTDRAAAQKGKKTKEVAEKGKCFHCNGGGHW
Query: KRNCSKFLGEKKNQG------------------------HINLNRIEKLVNSGLLNELEENFSPVCESCLEGKMTKCPFSGKGYRAEEPLELIHSDLCGP
KRNC K+L EKK HINLNRIE+LV +GLL+ELEEN+ PVCESCLEGKMTK PF+GKG+RA+EPLEL+HSDLCGP
Subjt: KRNCSKFLGEKKNQG------------------------HINLNRIEKLVNSGLLNELEENFSPVCESCLEGKMTKCPFSGKGYRAEEPLELIHSDLCGP
Query: MNIKARGGYEYFVSFIDYYSRYGHTYLMHKKSETLEKFKEYKTEVENLLGKSLKTHRSDRGGEYMDTEFQDYMIEHEITSQLSAPGMPQQNGISERRNRT
MN+KARGG+EYF++F D YSRYG+ YLM KSE LEKFKEYK EVEN L K++KT RSDRGGEYMD +FQ+Y++E I SQLSAPG PQQNG+SERRN+T
Subjt: MNIKARGGYEYFVSFIDYYSRYGHTYLMHKKSETLEKFKEYKTEVENLLGKSLKTHRSDRGGEYMDTEFQDYMIEHEITSQLSAPGMPQQNGISERRNRT
Query: LLDMVRSTMSYARLPDSFWGYAVETAVYILNNNLGMPDPCVGVKPEKV--------------GTPFEILPIR---------------YPKETRGGLCFYP
LLDMV S MSYA LP+SFWGYAV+TAVYILN +P V P K+ G P +L I Y K +RGG + P
Subjt: LLDMVRSTMSYARLPDSFWGYAVETAVYILNNNLGMPDPCVGVKPEKV--------------GTPFEILPIR---------------YPKETRGGLCFYP
Query: KDNRVLVSTNATFLEENHIRDHLPRSKMVLNEIDS----TSARVADGASTSTSVVDPITSSQI-RSQELGMPQRSGRVVRQPDRYMGLAETPVVTPDDDC
KDN+VLVSTNATFLEE+HIR+H PRSK+VLNE+ + S RV + S TSVV +S++ + Q L P+RSGRV P RYM L ET V D D
Subjt: KDNRVLVSTNATFLEENHIRDHLPRSKMVLNEIDS----TSARVADGASTSTSVVDPITSSQI-RSQELGMPQRSGRVVRQPDRYMGLAETPVVTPDDDC
Query: EDPLTYDQAMVDVDKDE
EDPLT+ +AM DVDKDE
Subjt: EDPLTYDQAMVDVDKDE
|
|
| A0A5D3BHG7 Gag/pol protein | 4.6e-133 | 58.55 | Show/hide |
Query: EAEANVA--IRSYHRGWTSGTKPVAPSPPKGKKKMKRG----KTDRAAAQKGKKTKEVAEKGKCFHCNGGGHWKRNCSKFLGEKK--NQGHINLNRIEKL
+ EANVA R +HRG TSGTK + S K K K+G K + AAA+ KK+K A KG CFH N GHWKRNC K+L EKK QGHINLNRIE+L
Subjt: EAEANVA--IRSYHRGWTSGTKPVAPSPPKGKKKMKRG----KTDRAAAQKGKKTKEVAEKGKCFHCNGGGHWKRNCSKFLGEKK--NQGHINLNRIEKL
Query: VNSGLLNELEENFSPVCESCLEGKMTKCPFSGKGYRAEEPLELIHSDLCGPMNIKARGGYEYFVSFIDYYSRYGHTYLMHKKSETLEKFKEYKTEVENLL
V +G+L+ELEEN P+CESCLEGKMTK PF+GKG+RA+EPLEL+HSDLCGPMN+KARG +EYF++F D YSRYG+ YLM KSE LEKFKEYK EVEN L
Subjt: VNSGLLNELEENFSPVCESCLEGKMTKCPFSGKGYRAEEPLELIHSDLCGPMNIKARGGYEYFVSFIDYYSRYGHTYLMHKKSETLEKFKEYKTEVENLL
Query: GKSLKTHRSDRGGEYMDTEFQDYMIEHEITSQLSAPGMPQQNGISERRNRTLLDMVRSTMSYARLPDSFWGYAVETAVYILNNNLGMPDPCVGVKPEKV-
K++KT RSDRGGEYMD +FQ+Y++E EI SQLSAPG PQQNG+SERRNRTLLDMVRS +SYA LP+SFWGYAV+TAVYILN +P V P K+
Subjt: GKSLKTHRSDRGGEYMDTEFQDYMIEHEITSQLSAPGMPQQNGISERRNRTLLDMVRSTMSYARLPDSFWGYAVETAVYILNNNLGMPDPCVGVKPEKV-
Query: -------------GTPFEILP---------------IRYPKETRGGLCFYPKDNRVLVSTNATFLEENHIRDHLPRSKMVLNEID----STSARVADGAS
G P +L + YPK TRGG + PKDN+V VSTNATFLEE+HIR+H PRSK+VLNE+ S RV + S
Subjt: -------------GTPFEILP---------------IRYPKETRGGLCFYPKDNRVLVSTNATFLEENHIRDHLPRSKMVLNEID----STSARVADGAS
Query: TSTSVVDPITSSQI-RSQELGMPQRSGRVVRQPDRYMGLAETPVVTPDDDCEDPLTYDQAMVDVDKDE
T VV +S++ + Q L P+RSGRV P RYM L ET V D D EDPLT+ +AM DVDKDE
Subjt: TSTSVVDPITSSQI-RSQELGMPQRSGRVVRQPDRYMGLAETPVVTPDDDCEDPLTYDQAMVDVDKDE
|
|
| A0A5D3BUN8 Gag/pol protein | 9.0e-129 | 56.02 | Show/hide |
Query: PSPPKGKKKMKR----GKTDRAAAQKGKKTKEVAEKGKCFHCNGGGHWKRNCSKFLGEKKNQ--------------------------------------
PSP +K KR GK A + K K VA K KCFHCN HWK NC K+L +KK +
Subjt: PSPPKGKKKMKR----GKTDRAAAQKGKKTKEVAEKGKCFHCNGGGHWKRNCSKFLGEKKNQ--------------------------------------
Query: -------GHINLNRIEKLVNSGLLNELEENFSPVCESCLEGKMTKCPFSGKGYRAEEPLELIHSDLCGPMNIKARGGYEYFVSFIDYYSRYGHTYLMHKK
GHINL+RI +LV +GLLN+L++ P CESCLEGKMTK PF+GKGYRA+EPLELIHSDLCGPMN+KARGG+EYF+SFID YSRYG+ YLM K
Subjt: -------GHINLNRIEKLVNSGLLNELEENFSPVCESCLEGKMTKCPFSGKGYRAEEPLELIHSDLCGPMNIKARGGYEYFVSFIDYYSRYGHTYLMHKK
Query: SETLEKFKEYKTEVENLLGKSLKTHRSDRGGEYMDTEFQDYMIEHEITSQLSAPGMPQQNGISERRNRTLLDMVRSTMSYARLPDSFWGYAVETAVYILN
SE LEKFKEYKTEVENLL K +K RSDRGGEYMD FQDYMIEH I SQLSAPG PQQNG+SERRNRTLLDMVRS MSYA+LP SFWGYAVETAV+ILN
Subjt: SETLEKFKEYKTEVENLLGKSLKTHRSDRGGEYMDTEFQDYMIEHEITSQLSAPGMPQQNGISERRNRTLLDMVRSTMSYARLPDSFWGYAVETAVYILN
Query: NNLGMPDPCVGVKPEKV--------------GTPFEILP---------------IRYPKETRGGLCFYPKDNRVLVSTNATFLEENHIRDHLPRSKMVLN
N +P V P ++ G P +L + YPKETRGGL F P++NRV VSTNATFLEE+H+R+H PRSK+VL+
Subjt: NNLGMPDPCVGVKPEKV--------------GTPFEILP---------------IRYPKETRGGLCFYPKDNRVLVSTNATFLEENHIRDHLPRSKMVLN
Query: EIDSTSARVADGASTSTSVVDPITSSQIR-SQELGMPQRSGRVVRQPDRYMGLAETPVVTPDDDCEDPLTYDQAMVDVDKDE
E S RV D S+ V + TS Q SQ L MP+RSGRVV QP+RY+GL ET VV PDD EDPL+Y QAM DVDKD+
Subjt: EIDSTSARVADGASTSTSVVDPITSSQIR-SQELGMPQRSGRVVRQPDRYMGLAETPVVTPDDDCEDPLTYDQAMVDVDKDE
|
|
| SwissProt top hits | e value | %identity | Alignment |
|---|
| P04146 Copia protein | 9.5e-27 | 34.2 | Show/hide |
Query: INLNRIEKLVNSGLLNELEENFSPVCESCLEGKMTKCPFSGKGYRA--EEPLELIHSDLCGPMNIKARGGYEYFVSFIDYYSRYGHTYLMHKKSETLEKF
+ + R + LLN LE + +CE CL GK + PF + + PL ++HSD+CGP+ YFV F+D ++ Y TYL+ KS+ F
Subjt: INLNRIEKLVNSGLLNELEENFSPVCESCLEGKMTKCPFSGKGYRA--EEPLELIHSDLCGPMNIKARGGYEYFVSFIDYYSRYGHTYLMHKKSETLEKF
Query: KEYKTEVENLLGKSLKTHRSDRGGEYMDTEFQDYMIEHEITSQLSAPGMPQQNGISERRNRTLLDMVRSTMSYARLPDSFWGYAVETAVYILN
+++ + E + D G EY+ E + + ++ I+ L+ P PQ NG+SER RT+ + R+ +S A+L SFWG AV TA Y++N
Subjt: KEYKTEVENLLGKSLKTHRSDRGGEYMDTEFQDYMIEHEITSQLSAPGMPQQNGISERRNRTLLDMVRSTMSYARLPDSFWGYAVETAVYILN
|
|
| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 2.2e-39 | 38.36 | Show/hide |
Query: KNQGHINLNRIEKLVNSGLLNELEENFSPVCESCLEGKMTKCPFSGKGYRAEEPLELIHSDLCGPMNIKARGGYEYFVSFIDYYSRYGHTYLMHKKSETL
K GH++ ++ L L++ + C+ CL GK + F R L+L++SD+CGPM I++ GG +YFV+FID SR Y++ K +
Subjt: KNQGHINLNRIEKLVNSGLLNELEENFSPVCESCLEGKMTKCPFSGKGYRAEEPLELIHSDLCGPMNIKARGGYEYFVSFIDYYSRYGHTYLMHKKSETL
Query: EKFKEYKTEVENLLGKSLKTHRSDRGGEYMDTEFQDYMIEHEITSQLSAPGMPQQNGISERRNRTLLDMVRSTMSYARLPDSFWGYAVETAVYILNNNLG
+ F+++ VE G+ LK RSD GGEY EF++Y H I + + PG PQ NG++ER NRT+++ VRS + A+LP SFWG AV+TA Y++N +
Subjt: EKFKEYKTEVENLLGKSLKTHRSDRGGEYMDTEFQDYMIEHEITSQLSAPGMPQQNGISERRNRTLLDMVRSTMSYARLPDSFWGYAVETAVYILNNNLG
Query: MPDPCVGVKPEKVGTPFEI
+ P PE+V T E+
Subjt: MPDPCVGVKPEKVGTPFEI
|
|
| Q12491 Transposon Ty2-B Gag-Pol polyprotein | 4.4e-16 | 28.37 | Show/hide |
Query: GHINLNRIEKLVNSGLLNELEEN-------FSPVCESCLEGKMTKCPFSGKGYRAE-----EPLELIHSDLCGPMNIKARGGYEYFVSFIDYYSRYGHTY
GH N I+K + + L+E+ + C CL GK TK KG R + EP + +H+D+ GP++ + YF+SF D +R+ Y
Subjt: GHINLNRIEKLVNSGLLNELEEN-------FSPVCESCLEGKMTKCPFSGKGYRAE-----EPLELIHSDLCGPMNIKARGGYEYFVSFIDYYSRYGHTY
Query: LMHKKSE--TLEKFKEYKTEVENLLGKSLKTHRSDRGGEYMDTEFQDYMIEHEITSQLSAPGMPQQNGISERRNRTLLDMVRSTMSYARLPDSFWGYAVE
+H + E L F ++N + + DRG EY + + IT+ + + +G++ER NRTLL+ R+ + + LP+ W AVE
Subjt: LMHKKSE--TLEKFKEYKTEVENLLGKSLKTHRSDRGGEYMDTEFQDYMIEHEITSQLSAPGMPQQNGISERRNRTLLDMVRSTMSYARLPDSFWGYAVE
Query: TAVYILNN
+ I N+
Subjt: TAVYILNN
|
|
| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 1.5e-24 | 31.92 | Show/hide |
Query: LNRIEKLVNSGLLNELEENFSPVCESCLEGKMTKCPFSGKGYRAEEPLELIHSDLCGPMNIKARGGYEYFVSFIDYYSRYGHTYLMHKKSETLEKFKEYK
LN + + +LN + S C CL K K PFS + PLE I+SD+ I + Y Y+V F+D+++RY Y + +KS+ E F +K
Subjt: LNRIEKLVNSGLLNELEENFSPVCESCLEGKMTKCPFSGKGYRAEEPLELIHSDLCGPMNIKARGGYEYFVSFIDYYSRYGHTYLMHKKSETLEKFKEYK
Query: TEVENLLGKSLKTHRSDRGGEYMDTEFQDYMIEHEITSQLSAPGMPQQNGISERRNRTLLDMVRSTMSYARLPDSFWGYAVETAVYILNNNLGMPDPCVG
+EN + T SD GGE++ +Y +H I+ S P P+ NG+SER++R +++ + +S+A +P ++W YA AVY++N +P P +
Subjt: TEVENLLGKSLKTHRSDRGGEYMDTEFQDYMIEHEITSQLSAPGMPQQNGISERRNRTLLDMVRSTMSYARLPDSFWGYAVETAVYILNNNLGMPDPCVG
Query: VKPEKVGTPFEIL
++ +PF+ L
Subjt: VKPEKVGTPFEIL
|
|
| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 1.6e-26 | 31.65 | Show/hide |
Query: GHINLNRIEKLVNSGLLNELEENFSPV-CESCLEGKMTKCPFSGKGYRAEEPLELIHSDLCGPMNIKARGGYEYFVSFIDYYSRYGHTYLMHKKSETLEK
GH +L + ++++ L L + + C C K K PFS + +PLE I+SD+ I + Y Y+V F+D+++RY Y + +KS+ +
Subjt: GHINLNRIEKLVNSGLLNELEENFSPV-CESCLEGKMTKCPFSGKGYRAEEPLELIHSDLCGPMNIKARGGYEYFVSFIDYYSRYGHTYLMHKKSETLEK
Query: FKEYKTEVENLLGKSLKTHRSDRGGEYMDTEFQDYMIEHEITSQLSAPGMPQQNGISERRNRTLLDMVRSTMSYARLPDSFWGYAVETAVYILNNNLGMP
F +K+ VEN + T SD GGE++ +DY+ +H I+ S P P+ NG+SER++R +++M + +S+A +P ++W YA AVY++N +P
Subjt: FKEYKTEVENLLGKSLKTHRSDRGGEYMDTEFQDYMIEHEITSQLSAPGMPQQNGISERRNRTLLDMVRSTMSYARLPDSFWGYAVETAVYILNNNLGMP
Query: DPCVGVKPEKVGTPFEIL---PIRYPKETRGGLCFYP
P + ++ +PF+ L P Y K G YP
Subjt: DPCVGVKPEKVGTPFEIL---PIRYPKETRGGLCFYP
|
|
