CuGenDBv2

Gene ID	Tan0017104
Organism	Trichosanthes anguina (Snake gourd v1)
Description	Winged helix-turn-helix DNA-binding domain containing protein
Genome location	LG01:15923790..15925135
RNA-Seq Expression	Tan0017104
Synteny	Tan0017104
Gene Ontology terms	GO:0016021 - integral component of membrane (cellular component) GO:0003677 - DNA binding (molecular function)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

XP_022142863.1 uncharacterized protein LOC111012874 [Momordica charantia]

1.3e-21

91.53

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Query:  MGGRGVIGDKWSMRVLWVCALGSAIGLYMVAQERQLQNRERMLAESLKDAESGGSGENV
        MGGRGVIGDKWSMRVLWVCA+GSAIGLYMVAQERQLQNR+RMLAESL D ESGG+GENV
Subjt:  MGGRGVIGDKWSMRVLWVCALGSAIGLYMVAQERQLQNRERMLAESLKDAESGGSGENV

XP_022929341.1 uncharacterized protein LOC111435944 [Cucurbita moschata]

2.6e-22

94.92

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Query:  MGGRGVIGDKWSMRVLWVCALGSAIGLYMVAQERQLQNRERMLAESLKDAESGGSGENV
        MGGRGVIGDKWSMRVLWVCALGSA+GLYMVAQERQLQNR RMLAESLKD ESGGSGENV
Subjt:  MGGRGVIGDKWSMRVLWVCALGSAIGLYMVAQERQLQNRERMLAESLKDAESGGSGENV

XP_022943152.1 uncharacterized protein LOC111447969 [Cucurbita moschata]

3.4e-22

94.92

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Query:  MGGRGVIGDKWSMRVLWVCALGSAIGLYMVAQERQLQNRERMLAESLKDAESGGSGENV
        MGGRGVIGDKWSMRVLWVCALGSAIGLYMV+QERQLQNR RMLAESLKD ESGGSGENV
Subjt:  MGGRGVIGDKWSMRVLWVCALGSAIGLYMVAQERQLQNRERMLAESLKDAESGGSGENV

XP_022985081.1 uncharacterized protein LOC111483159 [Cucurbita maxima]

7.5e-22

93.22

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Query:  MGGRGVIGDKWSMRVLWVCALGSAIGLYMVAQERQLQNRERMLAESLKDAESGGSGENV
        MGGRGVIGDKWSMRVLWVCALGSA+G YMVAQERQLQNR RMLAESLKD ESGGSGENV
Subjt:  MGGRGVIGDKWSMRVLWVCALGSAIGLYMVAQERQLQNRERMLAESLKDAESGGSGENV

XP_038903238.1 uncharacterized protein LOC120089884 [Benincasa hispida]

3.0e-23

98.31

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Query:  MGGRGVIGDKWSMRVLWVCALGSAIGLYMVAQERQLQNRERMLAESLKDAESGGSGENV
        MGGRGVIGDKWSMRVLWVCALGSAIGLYMVAQERQLQNR+RMLAESLKDAESGGSGENV
Subjt:  MGGRGVIGDKWSMRVLWVCALGSAIGLYMVAQERQLQNRERMLAESLKDAESGGSGENV

TrEMBL top hits

e value

%identity

Alignment

A0A6J1CPB9 uncharacterized protein LOC111012874

6.2e-22

91.53

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Query:  MGGRGVIGDKWSMRVLWVCALGSAIGLYMVAQERQLQNRERMLAESLKDAESGGSGENV
        MGGRGVIGDKWSMRVLWVCA+GSAIGLYMVAQERQLQNR+RMLAESL D ESGG+GENV
Subjt:  MGGRGVIGDKWSMRVLWVCALGSAIGLYMVAQERQLQNRERMLAESLKDAESGGSGENV

A0A6J1EMV3 uncharacterized protein LOC111435944

1.2e-22

94.92

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Query:  MGGRGVIGDKWSMRVLWVCALGSAIGLYMVAQERQLQNRERMLAESLKDAESGGSGENV
        MGGRGVIGDKWSMRVLWVCALGSA+GLYMVAQERQLQNR RMLAESLKD ESGGSGENV
Subjt:  MGGRGVIGDKWSMRVLWVCALGSAIGLYMVAQERQLQNRERMLAESLKDAESGGSGENV

A0A6J1FS83 uncharacterized protein LOC111447969

1.6e-22

94.92

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Query:  MGGRGVIGDKWSMRVLWVCALGSAIGLYMVAQERQLQNRERMLAESLKDAESGGSGENV
        MGGRGVIGDKWSMRVLWVCALGSAIGLYMV+QERQLQNR RMLAESLKD ESGGSGENV
Subjt:  MGGRGVIGDKWSMRVLWVCALGSAIGLYMVAQERQLQNRERMLAESLKDAESGGSGENV

A0A6J1J744 uncharacterized protein LOC111483159

3.6e-22

93.22

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Query:  MGGRGVIGDKWSMRVLWVCALGSAIGLYMVAQERQLQNRERMLAESLKDAESGGSGENV
        MGGRGVIGDKWSMRVLWVCALGSA+G YMVAQERQLQNR RMLAESLKD ESGGSGENV
Subjt:  MGGRGVIGDKWSMRVLWVCALGSAIGLYMVAQERQLQNRERMLAESLKDAESGGSGENV

A0A6J1KQV7 uncharacterized protein LOC111496793

2.0e-20

89.83

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Query:  MGGRGVIGDKWSMRVLWVCALGSAIGLYMVAQERQLQNRERMLAESLKDAESGGSGENV
        MGGRGVIG KW MRVLWVCALGSAIGLYMVAQERQLQNR+RMLAESLKD ESGG GE+V
Subjt:  MGGRGVIGDKWSMRVLWVCALGSAIGLYMVAQERQLQNRERMLAESLKDAESGGSGENV

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT3G15395.1 unknown protein

6.3e-19

72.88

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Query:  MGGRGVIGDKWSMRVLWVCALGSAIGLYMVAQERQLQNRERMLAESLKDAESGGSGENV
        MG RG+I DKWSMR+LW CA+GSAIGLYMVA ERQ QNR R +AESL+ AES G G+NV
Subjt:  MGGRGVIGDKWSMRVLWVCALGSAIGLYMVAQERQLQNRERMLAESLKDAESGGSGENV

AT3G15395.2 unknown protein

6.3e-19

72.88

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Query:  MGGRGVIGDKWSMRVLWVCALGSAIGLYMVAQERQLQNRERMLAESLKDAESGGSGENV
        MG RG+I DKWSMR+LW CA+GSAIGLYMVA ERQ QNR R +AESL+ AES G G+NV
Subjt:  MGGRGVIGDKWSMRVLWVCALGSAIGLYMVAQERQLQNRERMLAESLKDAESGGSGENV

AT3G15395.3 unknown protein

6.3e-19

72.88

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Query:  MGGRGVIGDKWSMRVLWVCALGSAIGLYMVAQERQLQNRERMLAESLKDAESGGSGENV
        MG RG+I DKWSMR+LW CA+GSAIGLYMVA ERQ QNR R +AESL+ AES G G+NV
Subjt:  MGGRGVIGDKWSMRVLWVCALGSAIGLYMVAQERQLQNRERMLAESLKDAESGGSGENV

AT3G15395.4 unknown protein

6.3e-19

72.88

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Query:  MGGRGVIGDKWSMRVLWVCALGSAIGLYMVAQERQLQNRERMLAESLKDAESGGSGENV
        MG RG+I DKWSMR+LW CA+GSAIGLYMVA ERQ QNR R +AESL+ AES G G+NV
Subjt:  MGGRGVIGDKWSMRVLWVCALGSAIGLYMVAQERQLQNRERMLAESLKDAESGGSGENV

Sequences

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CDS sequence

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ATGGGAGGCAGAGGAGTTATTGGAGATAAATGGTCCATGAGGGTTCTCTGGGTTTGTGCCTTGGGGAGTGCAATCGGTTTGTATATGGTTGCTCAAGAAAGACAATTACA
GAACAGGGAAAGAATGTTGGCTGAGAGTCTGAAAGATGCGGAATCAGGAGGCAGTGGTGAAAACGTTTAG

mRNA sequence

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AGAATAACATCAGCCTGTTACAGCTTGACTACTTGAAGTGATCCTTTTTGGTGGTCAATACCCTGTTTCATTATCTTTTGTCATCGTTACCTGCTGCTTTGTTCTATAGA
GAGCCATATGCTTTCTCCGCAATGACATTCCAGATTAGATCAGTTGTTTGTTGTCTTATCAATCTTCCTTACCCATGTCACAAGGGATTGTGACATCTAGCATACAGATC
TCTTTCCTTATTAATGCATCTAGTTCTTAAAAGCTTAAAAAAATGAACCTATCACATCATTTTCTTTGATCCTTTCAGAGGATCGACTCTCTGAGTGCTGTAATTACTAA
AATTGGCTTCTTGTTCAATTTTTGCAGAAAGATATGGGAGGCAGAGGAGTTATTGGAGATAAATGGTCCATGAGGGTTCTCTGGGTTTGTGCCTTGGGGAGTGCAATCGG
TTTGTATATGGTTGCTCAAGAAAGACAATTACAGAACAGGGAAAGAATGTTGGCTGAGAGTCTGAAAGATGCGGAATCAGGAGGCAGTGGTGAAAACGTTTAG

Protein sequence

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MGGRGVIGDKWSMRVLWVCALGSAIGLYMVAQERQLQNRERMLAESLKDAESGGSGENV

Tan0017104 (gene) of Snake gourd v1 genome