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Tan0017150 (gene) of Snake gourd v1 genome

Gene IDTan0017150
OrganismTrichosanthes anguina (Snake gourd v1)
Descriptionexpressed protein localized to the inner membrane of the chloroplast.
Genome locationLG05:22430834..22435101
RNA-Seq ExpressionTan0017150
SyntenyTan0017150
Gene Ontology termsGO:0009706 - chloroplast inner membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7010970.1 hypothetical protein SDJN02_27768, partial [Cucurbita argyrosperma subsp. argyrosperma]5.0e-7390.45Show/hide
Query:  MAACFAPSLSVSGGLIKASDLSSKSISFGPTPKLAVQKKCLKTNHKLSVRAEYNDGGRSGGGDFVAGFLLGGAVFGTLAYIFAPQIRRSLLNEDEYGFRR
        MAACFAPSLSVSGGLIKASDLSSKSISFG  PKLA+Q+KC +TNHKLSVRAEYNDGGR+GGG+FVAGFLLGGAVFGTLAYIFAPQIRRS+LNEDEYGFRR
Subjt:  MAACFAPSLSVSGGLIKASDLSSKSISFGPTPKLAVQKKCLKTNHKLSVRAEYNDGGRSGGGDFVAGFLLGGAVFGTLAYIFAPQIRRSLLNEDEYGFRR

Query:  AKRPIYYDEGLEKTRQTLNAKISQLNSAIDNVSSRLRGGNNTPAVPVEADPEIEATM
        A+RPIYYD+GLEKTRQTLN KI QLNSAIDNVSSRLRGGN TP+VPVEADPEIEATM
Subjt:  AKRPIYYDEGLEKTRQTLNAKISQLNSAIDNVSSRLRGGNNTPAVPVEADPEIEATM

XP_008459202.1 PREDICTED: uncharacterized protein LOC103498395 [Cucumis melo]5.9e-7492.41Show/hide
Query:  MAACFAPSLSVSGGLIKASDLSSKSISFGPTPKLAVQKKCLKTNHKLSVRAEYNDGGRSGGGDFVAGFLLGGAVFGTLAYIFAPQIRRSLLNEDEYGFRR
        MAACFAPSLSVSGGLIKASDLSSKS+SFG TPKLA+++KC KTNHKLSVRAEYNDGGRSGGGDFVAGFLLGGAVFGTLAY+FAPQIRRS+LNEDE+GFRR
Subjt:  MAACFAPSLSVSGGLIKASDLSSKSISFGPTPKLAVQKKCLKTNHKLSVRAEYNDGGRSGGGDFVAGFLLGGAVFGTLAYIFAPQIRRSLLNEDEYGFRR

Query:  AKRPIYYDEGLEKTRQTLNAKISQLNSAIDNVSSRLRGGNNTPAVPV-EADPEIEATM
        AKRP+YYDEGLEKTRQTLNAKISQLNSAIDNVSSRLRGGNNTPAVPV EA+PEIEATM
Subjt:  AKRPIYYDEGLEKTRQTLNAKISQLNSAIDNVSSRLRGGNNTPAVPV-EADPEIEATM

XP_022148671.1 uncharacterized protein LOC111017273 [Momordica charantia]6.5e-7393.63Show/hide
Query:  MAACFAPSLSVSGGLIKASDLSSKSISFGPTPKLAVQKKCLKTNHKLSVRAEYNDGGRSGGGDFVAGFLLGGAVFGTLAYIFAPQIRRSLLNEDEYGFRR
        MAACFAPSLSVSGGLIKASDLSSKSI+FG  PKLA+QKKCL+TN KLSVRAEYND GR GGGDFVAGFLLGGAVFGTLAYIFAPQIRRSLLNEDEYGFRR
Subjt:  MAACFAPSLSVSGGLIKASDLSSKSISFGPTPKLAVQKKCLKTNHKLSVRAEYNDGGRSGGGDFVAGFLLGGAVFGTLAYIFAPQIRRSLLNEDEYGFRR

Query:  AKRPIYYDEGLEKTRQTLNAKISQLNSAIDNVSSRLRGGNNTPAVPVEADPEIEATM
        AKRPIYYDEGLEKTRQTLNAKI QLNSAIDNVSSRLRGGNNTPAVPVEADPE EATM
Subjt:  AKRPIYYDEGLEKTRQTLNAKISQLNSAIDNVSSRLRGGNNTPAVPVEADPEIEATM

XP_023512433.1 uncharacterized protein LOC111777191 [Cucurbita pepo subsp. pepo]2.7e-7492.36Show/hide
Query:  MAACFAPSLSVSGGLIKASDLSSKSISFGPTPKLAVQKKCLKTNHKLSVRAEYNDGGRSGGGDFVAGFLLGGAVFGTLAYIFAPQIRRSLLNEDEYGFRR
        MAACFAPSLSVSGGLIKASDLSSKSISFG TPKLA+Q+KC +TNHKLSVRAEYNDGGRSGGG+FVAGFLLGGAVFGTLAYIFAPQIRRS+LNEDEYGFRR
Subjt:  MAACFAPSLSVSGGLIKASDLSSKSISFGPTPKLAVQKKCLKTNHKLSVRAEYNDGGRSGGGDFVAGFLLGGAVFGTLAYIFAPQIRRSLLNEDEYGFRR

Query:  AKRPIYYDEGLEKTRQTLNAKISQLNSAIDNVSSRLRGGNNTPAVPVEADPEIEATM
        A+RPIYYD+GLEKTRQTLN KI QLNSAIDNVSSRLRGGN TPAVPVEADPEIEATM
Subjt:  AKRPIYYDEGLEKTRQTLNAKISQLNSAIDNVSSRLRGGNNTPAVPVEADPEIEATM

XP_038902580.1 uncharacterized protein LOC120089235 [Benincasa hispida]5.9e-7494.27Show/hide
Query:  MAACFAPSLSVSGGLIKASDLSSKSISFGPTPKLAVQKKCLKTNHKLSVRAEYNDGGRSGGGDFVAGFLLGGAVFGTLAYIFAPQIRRSLLNEDEYGFRR
        MAACFAPSLSVSGGLIKASDLSSKSISFG  PKLA+Q+K  +TN KLSVRAEYNDG RSGGGDFVAGFLLGGAVFGTLAYIFAPQIRRSLLNEDEYGFRR
Subjt:  MAACFAPSLSVSGGLIKASDLSSKSISFGPTPKLAVQKKCLKTNHKLSVRAEYNDGGRSGGGDFVAGFLLGGAVFGTLAYIFAPQIRRSLLNEDEYGFRR

Query:  AKRPIYYDEGLEKTRQTLNAKISQLNSAIDNVSSRLRGGNNTPAVPVEADPEIEATM
        AKRPIYYDEGLEKTRQTLNAKISQLNSAIDNVSSRLRGGNNTPAVPVEADPEIEATM
Subjt:  AKRPIYYDEGLEKTRQTLNAKISQLNSAIDNVSSRLRGGNNTPAVPVEADPEIEATM

TrEMBL top hitse value%identityAlignment
A0A1S3C9M4 uncharacterized protein LOC1034983952.9e-7492.41Show/hide
Query:  MAACFAPSLSVSGGLIKASDLSSKSISFGPTPKLAVQKKCLKTNHKLSVRAEYNDGGRSGGGDFVAGFLLGGAVFGTLAYIFAPQIRRSLLNEDEYGFRR
        MAACFAPSLSVSGGLIKASDLSSKS+SFG TPKLA+++KC KTNHKLSVRAEYNDGGRSGGGDFVAGFLLGGAVFGTLAY+FAPQIRRS+LNEDE+GFRR
Subjt:  MAACFAPSLSVSGGLIKASDLSSKSISFGPTPKLAVQKKCLKTNHKLSVRAEYNDGGRSGGGDFVAGFLLGGAVFGTLAYIFAPQIRRSLLNEDEYGFRR

Query:  AKRPIYYDEGLEKTRQTLNAKISQLNSAIDNVSSRLRGGNNTPAVPV-EADPEIEATM
        AKRP+YYDEGLEKTRQTLNAKISQLNSAIDNVSSRLRGGNNTPAVPV EA+PEIEATM
Subjt:  AKRPIYYDEGLEKTRQTLNAKISQLNSAIDNVSSRLRGGNNTPAVPV-EADPEIEATM

A0A5D3CQ66 Uncharacterized protein2.9e-7492.41Show/hide
Query:  MAACFAPSLSVSGGLIKASDLSSKSISFGPTPKLAVQKKCLKTNHKLSVRAEYNDGGRSGGGDFVAGFLLGGAVFGTLAYIFAPQIRRSLLNEDEYGFRR
        MAACFAPSLSVSGGLIKASDLSSKS+SFG TPKLA+++KC KTNHKLSVRAEYNDGGRSGGGDFVAGFLLGGAVFGTLAY+FAPQIRRS+LNEDE+GFRR
Subjt:  MAACFAPSLSVSGGLIKASDLSSKSISFGPTPKLAVQKKCLKTNHKLSVRAEYNDGGRSGGGDFVAGFLLGGAVFGTLAYIFAPQIRRSLLNEDEYGFRR

Query:  AKRPIYYDEGLEKTRQTLNAKISQLNSAIDNVSSRLRGGNNTPAVPV-EADPEIEATM
        AKRP+YYDEGLEKTRQTLNAKISQLNSAIDNVSSRLRGGNNTPAVPV EA+PEIEATM
Subjt:  AKRPIYYDEGLEKTRQTLNAKISQLNSAIDNVSSRLRGGNNTPAVPV-EADPEIEATM

A0A6J1D647 uncharacterized protein LOC1110172733.2e-7393.63Show/hide
Query:  MAACFAPSLSVSGGLIKASDLSSKSISFGPTPKLAVQKKCLKTNHKLSVRAEYNDGGRSGGGDFVAGFLLGGAVFGTLAYIFAPQIRRSLLNEDEYGFRR
        MAACFAPSLSVSGGLIKASDLSSKSI+FG  PKLA+QKKCL+TN KLSVRAEYND GR GGGDFVAGFLLGGAVFGTLAYIFAPQIRRSLLNEDEYGFRR
Subjt:  MAACFAPSLSVSGGLIKASDLSSKSISFGPTPKLAVQKKCLKTNHKLSVRAEYNDGGRSGGGDFVAGFLLGGAVFGTLAYIFAPQIRRSLLNEDEYGFRR

Query:  AKRPIYYDEGLEKTRQTLNAKISQLNSAIDNVSSRLRGGNNTPAVPVEADPEIEATM
        AKRPIYYDEGLEKTRQTLNAKI QLNSAIDNVSSRLRGGNNTPAVPVEADPE EATM
Subjt:  AKRPIYYDEGLEKTRQTLNAKISQLNSAIDNVSSRLRGGNNTPAVPVEADPEIEATM

A0A6J1FVP6 uncharacterized protein LOC1114488974.1e-7390.45Show/hide
Query:  MAACFAPSLSVSGGLIKASDLSSKSISFGPTPKLAVQKKCLKTNHKLSVRAEYNDGGRSGGGDFVAGFLLGGAVFGTLAYIFAPQIRRSLLNEDEYGFRR
        MAACFAPSLSVSGGLIKASDLSSKSISFG  PKLA+Q+KC +T+HKLSVRAEYNDGGR+GGG+FVAGFLLGGAVFGTLAYIFAPQIRRS+LNEDEYGFRR
Subjt:  MAACFAPSLSVSGGLIKASDLSSKSISFGPTPKLAVQKKCLKTNHKLSVRAEYNDGGRSGGGDFVAGFLLGGAVFGTLAYIFAPQIRRSLLNEDEYGFRR

Query:  AKRPIYYDEGLEKTRQTLNAKISQLNSAIDNVSSRLRGGNNTPAVPVEADPEIEATM
        A+RPIYYD+GLEKTRQTLN KI QLNSAIDNVSSRLRGGN TPAVPVEADPEIEATM
Subjt:  AKRPIYYDEGLEKTRQTLNAKISQLNSAIDNVSSRLRGGNNTPAVPVEADPEIEATM

A0A6J1JGK4 uncharacterized protein LOC1114843147.1e-7390.45Show/hide
Query:  MAACFAPSLSVSGGLIKASDLSSKSISFGPTPKLAVQKKCLKTNHKLSVRAEYNDGGRSGGGDFVAGFLLGGAVFGTLAYIFAPQIRRSLLNEDEYGFRR
        MAAC APSLSVSGGLIKASDLSSKSISFG  PKLA+Q+KC ++NHKLSVRAEYNDGGRSGGG+FVAGFLLGGAVFGTLAYIFAPQIRRS+LNEDEYGFRR
Subjt:  MAACFAPSLSVSGGLIKASDLSSKSISFGPTPKLAVQKKCLKTNHKLSVRAEYNDGGRSGGGDFVAGFLLGGAVFGTLAYIFAPQIRRSLLNEDEYGFRR

Query:  AKRPIYYDEGLEKTRQTLNAKISQLNSAIDNVSSRLRGGNNTPAVPVEADPEIEATM
        A+RPIYYD+GLEKTRQTLN KI QLNSAIDNVSSRLRGGN TPAVPVEADPEIEATM
Subjt:  AKRPIYYDEGLEKTRQTLNAKISQLNSAIDNVSSRLRGGNNTPAVPVEADPEIEATM

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G42960.1 expressed protein localized to the inner membrane of the chloroplast.4.2e-1740.74Show/hide
Query:  SISFGPTPKLAVQKKCLKTNHKLSVRAEYNDGGRSGG-GDFVAGFLLGGAVFGTLAYIFAPQIRRSLLNEDEYGFRRAKRPIYYDE--GLEKTRQTLNAK
        S+SFG      +     +T   L++++ Y D   SG  G FV GF+LGG + G L  ++APQI +++   D     R      YDE   LEKTR+ L  K
Subjt:  SISFGPTPKLAVQKKCLKTNHKLSVRAEYNDGGRSGG-GDFVAGFLLGGAVFGTLAYIFAPQIRRSLLNEDEYGFRRAKRPIYYDE--GLEKTRQTLNAK

Query:  ISQLNSAIDNVSSRLRGGNNTPAVPVEADPEIEAT
        I+QLNSAID+VSS+L+   +TP     +  EIEAT
Subjt:  ISQLNSAIDNVSSRLRGGNNTPAVPVEADPEIEAT

AT3G02900.1 unknown protein1.4e-3654.88Show/hide
Query:  MAACFAPSLSVSGGLIKASDLSSKSISFGPTPKLAVQKKCLKTNHKLSVRAEYNDGGRSGG-GDFVAGFLLGGAVFGTLAYIFAPQIRRSLLNEDEYGFR
        MA+  A  +S SG     +  +  +I    T  L VQ K    +HKLSV A Y  G + GG  DFV GFLLG AVFGTLAYIFAPQIRRS+L+E+EYGF+
Subjt:  MAACFAPSLSVSGGLIKASDLSSKSISFGPTPKLAVQKKCLKTNHKLSVRAEYNDGGRSGG-GDFVAGFLLGGAVFGTLAYIFAPQIRRSLLNEDEYGFR

Query:  RAKRPIYYDEGLEKTRQTLNAKISQLNSAIDNVSSRLRGG-------NNTPAVPVEADPEIEAT
        + ++P+YYDEGLE+ R+ LN KI QLNSAID VSSRL+GG        ++P+VPVE D E EAT
Subjt:  RAKRPIYYDEGLEKTRQTLNAKISQLNSAIDNVSSRLRGG-------NNTPAVPVEADPEIEAT

AT3G02900.2 unknown protein8.1e-3762.6Show/hide
Query:  LAVQKKCLKTNHKLSVRAEYNDGGRSGG-GDFVAGFLLGGAVFGTLAYIFAPQIRRSLLNEDEYGFRRAKRPIYYDEGLEKTRQTLNAKISQLNSAIDNV
        L VQ K    +HKLSV A Y  G + GG  DFV GFLLG AVFGTLAYIFAPQIRRS+L+E+EYGF++ ++P+YYDEGLE+ R+ LN KI QLNSAID V
Subjt:  LAVQKKCLKTNHKLSVRAEYNDGGRSGG-GDFVAGFLLGGAVFGTLAYIFAPQIRRSLLNEDEYGFRRAKRPIYYDEGLEKTRQTLNAKISQLNSAIDNV

Query:  SSRLRGG-------NNTPAVPVEADPEIEAT
        SSRL+GG        ++P+VPVE D E EAT
Subjt:  SSRLRGG-------NNTPAVPVEADPEIEAT

AT5G16660.1 unknown protein3.7e-4263.1Show/hide
Query:  MAACFAPS-LSVSG----GLIKASDLS--SKSISFGPTPKLAVQKKCLKTNHKLSVRAEYNDGGRSG-GGDFVAGFLLGGAVFGTLAYIFAPQIRRSLLN
        MA+C A + LS+SG      +KA+ LS  +K  S   T  L + KK  +T  K SV A Y DG RSG  GDF+AGFLLGGAVFG +AYIFAPQIRRS+LN
Subjt:  MAACFAPS-LSVSG----GLIKASDLS--SKSISFGPTPKLAVQKKCLKTNHKLSVRAEYNDGGRSG-GGDFVAGFLLGGAVFGTLAYIFAPQIRRSLLN

Query:  -EDEYGFRRAKRPIYYDEGLEKTRQTLNAKISQLNSAIDNVSSRLRG-GNNTPA--VPVEADPEIEAT
         EDEYGF + K+P YYDEGLEKTR+TLN KI QLNSAIDNVSSRLRG   NT +  VPVE DPE+EAT
Subjt:  -EDEYGFRRAKRPIYYDEGLEKTRQTLNAKISQLNSAIDNVSSRLRG-GNNTPA--VPVEADPEIEAT

AT5G16660.2 unknown protein6.0e-4062.5Show/hide
Query:  MAACFAPS-LSVSG----GLIKASDLS--SKSISFGPTPKLAVQKKCLKTNHKLSVRAEYNDGGRSG-GGDFVAGFLLGGAVFGTLAYIFAPQIRRSLLN
        MA+C A + LS+SG      +KA+ LS  +K  S   T  L + KK  +T  K SV A   DG RSG  GDF+AGFLLGGAVFG +AYIFAPQIRRS+LN
Subjt:  MAACFAPS-LSVSG----GLIKASDLS--SKSISFGPTPKLAVQKKCLKTNHKLSVRAEYNDGGRSG-GGDFVAGFLLGGAVFGTLAYIFAPQIRRSLLN

Query:  -EDEYGFRRAKRPIYYDEGLEKTRQTLNAKISQLNSAIDNVSSRLRG-GNNTPA--VPVEADPEIEAT
         EDEYGF + K+P YYDEGLEKTR+TLN KI QLNSAIDNVSSRLRG   NT +  VPVE DPE+EAT
Subjt:  -EDEYGFRRAKRPIYYDEGLEKTRQTLNAKISQLNSAIDNVSSRLRG-GNNTPA--VPVEADPEIEAT


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCGCCTGCTTTGCTCCTTCGCTGTCCGTGTCTGGGGGATTAATCAAGGCCTCAGATCTCTCCTCAAAGTCCATTTCCTTTGGGCCAACACCAAAACTTGCCGTTCA
GAAGAAGTGCTTGAAAACCAACCACAAGTTATCAGTCCGTGCTGAGTACAATGATGGTGGTAGAAGTGGAGGTGGGGATTTCGTTGCTGGTTTTCTTCTTGGGGGTGCTG
TATTTGGAACTTTAGCTTACATTTTTGCTCCACAGATCAGGAGATCTCTACTAAATGAAGACGAGTACGGTTTTAGAAGGGCAAAGCGTCCAATCTACTACGACGAAGGT
CTAGAGAAAACCAGACAGACATTGAATGCAAAAATAAGCCAATTGAATTCTGCGATTGACAATGTATCTTCACGTCTGAGAGGTGGCAACAATACTCCAGCTGTGCCAGT
TGAAGCCGATCCTGAAATTGAAGCTACCATGTAA
mRNA sequenceShow/hide mRNA sequence
TGGATTAGTAGTTAATTGGAACACAATTGGATAGATAAATGGAGCTGAATTCATAACCTTATAAAAAAAAGTGTAATTAGAAGTTATAGATTATAAAATAGGTAACAGAG
GCGACCTATAATCCGGCTATCTTCAACACTCTCTCTTGCTCTTTCTTCTTCCTCTCTCTCTCTCGCTCTCTCTCCAATTTCTCTGATCTCTCTCTAGATCTCTGCTCTCC
TTCTTCCACATGGCCGCCTGCTTTGCTCCTTCGCTGTCCGTGTCTGGGGGATTAATCAAGGCCTCAGATCTCTCCTCAAAGTCCATTTCCTTTGGGCCAACACCAAAACT
TGCCGTTCAGAAGAAGTGCTTGAAAACCAACCACAAGTTATCAGTCCGTGCTGAGTACAATGATGGTGGTAGAAGTGGAGGTGGGGATTTCGTTGCTGGTTTTCTTCTTG
GGGGTGCTGTATTTGGAACTTTAGCTTACATTTTTGCTCCACAGATCAGGAGATCTCTACTAAATGAAGACGAGTACGGTTTTAGAAGGGCAAAGCGTCCAATCTACTAC
GACGAAGGTCTAGAGAAAACCAGACAGACATTGAATGCAAAAATAAGCCAATTGAATTCTGCGATTGACAATGTATCTTCACGTCTGAGAGGTGGCAACAATACTCCAGC
TGTGCCAGTTGAAGCCGATCCTGAAATTGAAGCTACCATGTAAATTCAACTTAAACATGGACGGATCATAATTCAAAAGGTTTGAAGCTTTTACATCTTAGAGACCATAT
CATCTATGCCACCATTTTTAATTGAAAGTTCTTTGGATTGATCATGTTCAAAATGGGATTCTACAGTTTATTAGCATTGTTGGAAATATCTTAAGATAAGTAAATCACTG
CTAAATCCCAAATTTTGAGGCTTAAACTTATTTGTAAGAGTATATTTAGTGTTTTTTTTGTGTATATATATATATATATATTCTTAACAGAACTACTTATAGAGATTAAT
ACAAAACTTAATAAATT
Protein sequenceShow/hide protein sequence
MAACFAPSLSVSGGLIKASDLSSKSISFGPTPKLAVQKKCLKTNHKLSVRAEYNDGGRSGGGDFVAGFLLGGAVFGTLAYIFAPQIRRSLLNEDEYGFRRAKRPIYYDEG
LEKTRQTLNAKISQLNSAIDNVSSRLRGGNNTPAVPVEADPEIEATM