; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0017171 (gene) of Snake gourd v1 genome

Gene IDTan0017171
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionLOW QUALITY PROTEIN: uncharacterized protein LOC111024115
Genome locationLG11:36000649..36007903
RNA-Seq ExpressionTan0017171
SyntenyTan0017171
Gene Ontology termsGO:0005488 - binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0043652.1 uncharacterized protein E6C27_scaffold320G001000 [Cucumis melo var. makuwa]1.3e-0749.32Show/hide
Query:  NEARMREAQQGTMERMIRGIEELSERIRRLEVQNHARRRIPPP--PQQREDDHDNEYEGGSSDQLEDDQVTLI
        +E ++REAQQG + RMI  +E L++R+ R E++N AR R+PPP  P    + +DN+ EG  SD L+DDQVTL+
Subjt:  NEARMREAQQGTMERMIRGIEELSERIRRLEVQNHARRRIPPP--PQQREDDHDNEYEGGSSDQLEDDQVTLI

XP_022157414.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111024115 [Momordica charantia]1.5e-1155.95Show/hide
Query:  LVDMAQEGDLNINEARMREAQQGTMERMIRGIEELSERIRRLEVQNHARRRIPPPPQQREDDHDNEYEGGSSDQLEDDQVTLIA
        + ++  EG  NI++AR REA +GT+ERMIR +E L+ERI RLE QN A  R+PPPP  R  D D EYEG  SD  EDDQ T++A
Subjt:  LVDMAQEGDLNINEARMREAQQGTMERMIRGIEELSERIRRLEVQNHARRRIPPPPQQREDDHDNEYEGGSSDQLEDDQVTLIA

XP_022971169.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111469948, partial [Cucurbita maxima]5.8e-0854.17Show/hide
Query:  EGDLNINEARMREAQQGTMERMIRGIEELSERIRRLEVQNHARRRIPPPPQQREDDHDNEYEGGSSDQLEDD
        + + +I +AR+REAQQ TMER+IRGIEEL++RI RLE+QN AR+RIP P    +      YEG +SD  ED+
Subjt:  EGDLNINEARMREAQQGTMERMIRGIEELSERIRRLEVQNHARRRIPPPPQQREDDHDNEYEGGSSDQLEDD

XP_023520282.1 uncharacterized protein LOC111783592 [Cucurbita pepo subsp. pepo]1.2e-0855.56Show/hide
Query:  EGDLNINEARMREAQQGTMERMIRGIEELSERIRRLEVQNHARRRIPPPPQQREDDHDNEYEGGSSDQLEDD
        + + NI +AR+REAQQ TMER+IRGIEEL++RI RLE+QN AR+RIP P    +      YEG +SD  ED+
Subjt:  EGDLNINEARMREAQQGTMERMIRGIEELSERIRRLEVQNHARRRIPPPPQQREDDHDNEYEGGSSDQLEDD

XP_023520835.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111784339 [Cucurbita pepo subsp. pepo]1.2e-0855.56Show/hide
Query:  EGDLNINEARMREAQQGTMERMIRGIEELSERIRRLEVQNHARRRIPPPPQQREDDHDNEYEGGSSDQLEDD
        + + NI +AR+REAQQ TMER+IRGIEEL++RI RLE+QN AR+RIP P    +      YEG +SD  ED+
Subjt:  EGDLNINEARMREAQQGTMERMIRGIEELSERIRRLEVQNHARRRIPPPPQQREDDHDNEYEGGSSDQLEDD

TrEMBL top hitse value%identityAlignment
A0A5A7TK52 Retrotrans_gag domain-containing protein6.2e-0849.32Show/hide
Query:  NEARMREAQQGTMERMIRGIEELSERIRRLEVQNHARRRIPPP--PQQREDDHDNEYEGGSSDQLEDDQVTLI
        +E ++REAQQG + RMI  +E L++R+ R E++N AR R+PPP  P    + +DN+ EG  SD L+DDQVTL+
Subjt:  NEARMREAQQGTMERMIRGIEELSERIRRLEVQNHARRRIPPP--PQQREDDHDNEYEGGSSDQLEDDQVTLI

A0A6J1DWE9 LOW QUALITY PROTEIN: uncharacterized protein LOC1110241157.1e-1255.95Show/hide
Query:  LVDMAQEGDLNINEARMREAQQGTMERMIRGIEELSERIRRLEVQNHARRRIPPPPQQREDDHDNEYEGGSSDQLEDDQVTLIA
        + ++  EG  NI++AR REA +GT+ERMIR +E L+ERI RLE QN A  R+PPPP  R  D D EYEG  SD  EDDQ T++A
Subjt:  LVDMAQEGDLNINEARMREAQQGTMERMIRGIEELSERIRRLEVQNHARRRIPPPPQQREDDHDNEYEGGSSDQLEDDQVTLIA

A0A6J1I7T3 LOW QUALITY PROTEIN: uncharacterized protein LOC1114699482.8e-0854.17Show/hide
Query:  EGDLNINEARMREAQQGTMERMIRGIEELSERIRRLEVQNHARRRIPPPPQQREDDHDNEYEGGSSDQLEDD
        + + +I +AR+REAQQ TMER+IRGIEEL++RI RLE+QN AR+RIP P    +      YEG +SD  ED+
Subjt:  EGDLNINEARMREAQQGTMERMIRGIEELSERIRRLEVQNHARRRIPPPPQQREDDHDNEYEGGSSDQLEDD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGCCATCCTTCTTGGGTACCAAAATCACCGGAACTGAGTCCAATTACAAGGTCGAGAGCCAAGAAGCTACAACAAGCTTTAATCACTCATATTCAAGCTATGGTGAG
CTCAAAAGAGGAGGTTCTAGAAGATAATTTGCATGCTAGAGTCATTCAAGTGGTGTTGATCGTACCTCTTGTGGACATGGCACAAGAAGGTGATCTTAACATTAACGAAG
CCCGAATGAGGGAGGCACAACAAGGAACCATGGAGAGAATGATTCGTGGAATAGAAGAGTTATCGGAGCGTATACGGAGGTTGGAGGTTCAAAACCACGCTAGGAGGAGA
ATTCCACCCCCTCCACAACAACGTGAGGATGACCATGACAACGAATATGAGGGAGGAAGTTCTGATCAACTAGAAGATGACCAAGTTACATTAATAGCAAATTTGCATGC
TAGAGTCATTCAAGTGGTGTTGATCGTACCTCTTGTGGAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGTGCCATCCTTCTTGGGTACCAAAATCACCGGAACTGAGTCCAATTACAAGGTCGAGAGCCAAGAAGCTACAACAAGCTTTAATCACTCATATTCAAGCTATGGTGAG
CTCAAAAGAGGAGGTTCTAGAAGATAATTTGCATGCTAGAGTCATTCAAGTGGTGTTGATCGTACCTCTTGTGGACATGGCACAAGAAGGTGATCTTAACATTAACGAAG
CCCGAATGAGGGAGGCACAACAAGGAACCATGGAGAGAATGATTCGTGGAATAGAAGAGTTATCGGAGCGTATACGGAGGTTGGAGGTTCAAAACCACGCTAGGAGGAGA
ATTCCACCCCCTCCACAACAACGTGAGGATGACCATGACAACGAATATGAGGGAGGAAGTTCTGATCAACTAGAAGATGACCAAGTTACATTAATAGCAAATTTGCATGC
TAGAGTCATTCAAGTGGTGTTGATCGTACCTCTTGTGGAGTGA
Protein sequenceShow/hide protein sequence
MCHPSWVPKSPELSPITRSRAKKLQQALITHIQAMVSSKEEVLEDNLHARVIQVVLIVPLVDMAQEGDLNINEARMREAQQGTMERMIRGIEELSERIRRLEVQNHARRR
IPPPPQQREDDHDNEYEGGSSDQLEDDQVTLIANLHARVIQVVLIVPLVE