; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0017208 (gene) of Snake gourd v1 genome

Gene IDTan0017208
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionCCHC-type domain-containing protein
Genome locationLG11:39917100..39918854
RNA-Seq ExpressionTan0017208
SyntenyTan0017208
Gene Ontology termsNA
InterPro domainsIPR025836 - Zinc knuckle CX2CX4HX4C
IPR040256 - Uncharacterized protein At4g02000-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022132681.1 uncharacterized protein LOC111005481 [Momordica charantia]3.0e-1646.6Show/hide
Query:  MAQRLGNDMGSFVEFDEGNGELSWGASMRVKIWIDITKSLRRGIKLNLDGPMGGVLISIKYEKLQEFCSHCGIIGHHFKGCNQFYKNSTQGVKFHQYGQY
        MA RLGN +G F + +       WG+ +RV++  D+ K L RGIKLNLDGPMGG  I I+YE+L +F  HCG + H  K C+    +S    K  QYG +
Subjt:  MAQRLGNDMGSFVEFDEGNGELSWGASMRVKIWIDITKSLRRGIKLNLDGPMGGVLISIKYEKLQEFCSHCGIIGHHFKGCNQFYKNSTQGVKFHQYGQY

Query:  LRF
        LRF
Subjt:  LRF

XP_022156185.1 uncharacterized protein LOC111023135 [Momordica charantia]4.0e-2151.43Show/hide
Query:  MAQRLGNDMGSFVEFDEGNGELSWGASMRVKIWIDITKSLRRGIKLNLDGPMGGVLISIKYEKLQEFCSHCGIIGHHFKGCNQFYKNSTQGVK-FHQYGQ
        MA RLGN +G+FV+ D      SWGAS+R+++ IDITK LRRGIK+N+DGPMGG  I I+YE+L +FC  CG+IGH    C+  Y  +    +   +YG 
Subjt:  MAQRLGNDMGSFVEFDEGNGELSWGASMRVKIWIDITKSLRRGIKLNLDGPMGGVLISIKYEKLQEFCSHCGIIGHHFKGCNQFYKNSTQGVK-FHQYGQ

Query:  YLRFV
        +LRFV
Subjt:  YLRFV

XP_022158377.1 uncharacterized protein LOC111024874 [Momordica charantia]2.1e-1732.84Show/hide
Query:  MAQRLGNDMGSFVEFDEGNGELSWGASMRVKIWIDITKSLRRGIKLNLDGPMGGVLISIKYEKLQEFCSHCGIIGHHFKGCNQFYKNSTQGVKFHQYGQY
        MA RLGN +G F E D  +    WG+++RV++ +DI+K LRRGIKLNLDGP+GG  I I+YE+L +FC HCG+               +   K HQYG +
Subjt:  MAQRLGNDMGSFVEFDEGNGELSWGASMRVKIWIDITKSLRRGIKLNLDGPMGGVLISIKYEKLQEFCSHCGIIGHHFKGCNQFYKNSTQGVKFHQYGQY

Query:  LRFVNQSLVIARSPTSDDHKKHHSSEKTTATRLGTTMATSPASSVKSGTEGSPSAINIGW-----ISKSPAPGGSCGEDGEHAKKVEEA----SIKEVDS
        LR+  Q  V    PT    K+        +     + +TSP  +   G + +P+   I       ++++P  G    + G+    ++E     ++KE+ +
Subjt:  LRFVNQSLVIARSPTSDDHKKHHSSEKTTATRLGTTMATSPASSVKSGTEGSPSAINIGW-----ISKSPAPGGSCGEDGEHAKKVEEA----SIKEVDS

Query:  L
        L
Subjt:  L

XP_042961334.1 uncharacterized protein LOC122296019 [Carya illinoinensis]6.9e-1337.01Show/hide
Query:  MAQRLGNDMGSFVEFDEGNGELSWGASMRVKIWIDITKSLRRGIKLNLDGPMGGVLISIKYEKLQEFCSHCGIIGHHFKGCNQFYKNSTQGVKF-HQYGQ
        M +RLGN +G  +  D    E  WG  +RVK+ +DITK L RG  +N+DG      I  +YE+L  FC HCG I H   GC +       GV    QYG 
Subjt:  MAQRLGNDMGSFVEFDEGNGELSWGASMRVKIWIDITKSLRRGIKLNLDGPMGGVLISIKYEKLQEFCSHCGIIGHHFKGCNQFYKNSTQGVKF-HQYGQ

Query:  YLRFVNQSLVIARSPTSDDHKKHHSSE
        +LR  ++ L+ +      +     SSE
Subjt:  YLRFVNQSLVIARSPTSDDHKKHHSSE

XP_042972822.1 uncharacterized protein LOC122304628 [Carya illinoinensis]6.9e-1337.01Show/hide
Query:  MAQRLGNDMGSFVEFDEGNGELSWGASMRVKIWIDITKSLRRGIKLNLDGPMGGVLISIKYEKLQEFCSHCGIIGHHFKGCNQFYKNSTQGVKF-HQYGQ
        M +RLGN +G  +  D    E  WG  +RVK+ +DITK L RG  +N+DG      I  +YE+L  FC HCG I H   GC +       GV    QYG 
Subjt:  MAQRLGNDMGSFVEFDEGNGELSWGASMRVKIWIDITKSLRRGIKLNLDGPMGGVLISIKYEKLQEFCSHCGIIGHHFKGCNQFYKNSTQGVKF-HQYGQ

Query:  YLRFVNQSLVIARSPTSDDHKKHHSSE
        +LR  ++ L+ +      +     SSE
Subjt:  YLRFVNQSLVIARSPTSDDHKKHHSSE

TrEMBL top hitse value%identityAlignment
A0A6J1BSZ1 uncharacterized protein LOC1110054811.4e-1646.6Show/hide
Query:  MAQRLGNDMGSFVEFDEGNGELSWGASMRVKIWIDITKSLRRGIKLNLDGPMGGVLISIKYEKLQEFCSHCGIIGHHFKGCNQFYKNSTQGVKFHQYGQY
        MA RLGN +G F + +       WG+ +RV++  D+ K L RGIKLNLDGPMGG  I I+YE+L +F  HCG + H  K C+    +S    K  QYG +
Subjt:  MAQRLGNDMGSFVEFDEGNGELSWGASMRVKIWIDITKSLRRGIKLNLDGPMGGVLISIKYEKLQEFCSHCGIIGHHFKGCNQFYKNSTQGVKFHQYGQY

Query:  LRF
        LRF
Subjt:  LRF

A0A6J1DU55 uncharacterized protein LOC1110231351.9e-2151.43Show/hide
Query:  MAQRLGNDMGSFVEFDEGNGELSWGASMRVKIWIDITKSLRRGIKLNLDGPMGGVLISIKYEKLQEFCSHCGIIGHHFKGCNQFYKNSTQGVK-FHQYGQ
        MA RLGN +G+FV+ D      SWGAS+R+++ IDITK LRRGIK+N+DGPMGG  I I+YE+L +FC  CG+IGH    C+  Y  +    +   +YG 
Subjt:  MAQRLGNDMGSFVEFDEGNGELSWGASMRVKIWIDITKSLRRGIKLNLDGPMGGVLISIKYEKLQEFCSHCGIIGHHFKGCNQFYKNSTQGVK-FHQYGQ

Query:  YLRFV
        +LRFV
Subjt:  YLRFV

A0A6J1DX30 uncharacterized protein LOC1110248741.0e-1732.84Show/hide
Query:  MAQRLGNDMGSFVEFDEGNGELSWGASMRVKIWIDITKSLRRGIKLNLDGPMGGVLISIKYEKLQEFCSHCGIIGHHFKGCNQFYKNSTQGVKFHQYGQY
        MA RLGN +G F E D  +    WG+++RV++ +DI+K LRRGIKLNLDGP+GG  I I+YE+L +FC HCG+               +   K HQYG +
Subjt:  MAQRLGNDMGSFVEFDEGNGELSWGASMRVKIWIDITKSLRRGIKLNLDGPMGGVLISIKYEKLQEFCSHCGIIGHHFKGCNQFYKNSTQGVKFHQYGQY

Query:  LRFVNQSLVIARSPTSDDHKKHHSSEKTTATRLGTTMATSPASSVKSGTEGSPSAINIGW-----ISKSPAPGGSCGEDGEHAKKVEEA----SIKEVDS
        LR+  Q  V    PT    K+        +     + +TSP  +   G + +P+   I       ++++P  G    + G+    ++E     ++KE+ +
Subjt:  LRFVNQSLVIARSPTSDDHKKHHSSEKTTATRLGTTMATSPASSVKSGTEGSPSAINIGW-----ISKSPAPGGSCGEDGEHAKKVEEA----SIKEVDS

Query:  L
        L
Subjt:  L

A0A803M277 Uncharacterized protein1.8e-1128.78Show/hide
Query:  AQRLGNDMGSFVEFDEGNGELSWGASMRVKIWIDITKSLRRGIKLNLDGPMGGVLISIKYEKLQEFCSHCGIIGHHFKGCNQF-YKNSTQGVKFHQYGQY
        A+ +G+ +G F+EFD+ +  L W   +R+K+WID+ K+LRRG+K+ + G      +  KYE+L +FC +CG +GH+ K C+    ++   G    QYG +
Subjt:  AQRLGNDMGSFVEFDEGNGELSWGASMRVKIWIDITKSLRRGIKLNLDGPMGGVLISIKYEKLQEFCSHCGIIGHHFKGCNQF-YKNSTQGVKFHQYGQY

Query:  LRFVNQSLVIARSPTSDDHKKHHSSEKTTATRLG--------TTMATSPASSVKSGTEGSPSAINIGWISKSPAPGGS---CGEDGE---HAKKVEEASI
        L      L  ++    D  K+    E  + ++ G          +   P S+ +     SPS  N+      P P  +   C +D +   HA+ V ++S 
Subjt:  LRFVNQSLVIARSPTSDDHKKHHSSEKTTATRLG--------TTMATSPASSVKSGTEGSPSAINIGWISKSPAPGGS---CGEDGE---HAKKVEEASI

Query:  KEVDS
          V S
Subjt:  KEVDS

A0A803NE34 Uncharacterized protein5.3e-1142.27Show/hide
Query:  GNDMGSFVEFDEGNGELSWGASMRVKIWIDITKSLRRGIKLNLDGPMGGVLISIKYEKLQEFCSHCGIIGHHFKGCN-QFYKNSTQGVKFHQYGQYL
        G  +G F+E D+ +  L WG  MRVKI  DI K LRRGIK++  G      I  KYE+L++FC +CG +GH  + C+ Q  ++   G   +QYG +L
Subjt:  GNDMGSFVEFDEGNGELSWGASMRVKIWIDITKSLRRGIKLNLDGPMGGVLISIKYEKLQEFCSHCGIIGHHFKGCN-QFYKNSTQGVKFHQYGQYL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G47920.1 unknown protein8.1e-0428.75Show/hide
Query:  AQRLGNDMGSFVEFDEGNGELSWGASMRVKIWIDITKSLRRGIKLNLDGPMGGVLISIKYEKLQEFCSHCGIIGHHFKGC
        A  + +++G  +  D  +  ++  A +RV++ I IT  LR   ++  D      LI  +YE+L+  CS C  + HH   C
Subjt:  AQRLGNDMGSFVEFDEGNGELSWGASMRVKIWIDITKSLRRGIKLNLDGPMGGVLISIKYEKLQEFCSHCGIIGHHFKGC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCCAGAGATTGGGTAATGATATGGGTTCCTTTGTGGAGTTTGATGAGGGGAATGGAGAACTGAGTTGGGGGGCGAGCATGAGAGTGAAAATTTGGATTGATATAAC
AAAATCGTTGAGAAGGGGAATAAAACTGAACCTGGATGGTCCCATGGGAGGAGTTCTGATTTCTATCAAGTACGAGAAATTACAAGAATTTTGTTCTCACTGTGGGATCA
TAGGACACCATTTCAAGGGCTGCAACCAATTCTACAAGAACTCAACCCAAGGTGTGAAATTTCACCAATATGGACAGTACCTGAGATTCGTGAACCAATCTCTAGTGATA
GCCCGCTCCCCTACTTCAGATGATCACAAGAAGCATCATTCTAGTGAGAAAACGACAGCAACGAGGCTGGGTACAACAATGGCTACTTCTCCGGCGTCTTCTGTGAAATC
AGGAACGGAGGGATCTCCGTCAGCGATCAACATCGGTTGGATCTCCAAGTCACCGGCGCCGGGAGGATCTTGCGGCGAAGATGGAGAACACGCAAAAAAAGTGGAAGAAG
CTTCGATCAAGGAAGTGGACAGTTTAATTGATGGGCTTTTGCATGCCAGTAGGCTGGACAAGCTCGTGGGCCTTTCAGTGCACAAGGAACAGGCGGTTTTGGTCGATCCC
ATCACAGTCACAATGGTGGGCCTAAAGGAGGATGGGTCTGGTAAGCCTCTAGCTGAAAATTCAACTCCAACCTCAGTCATTGGGAAGAAACTTTCACGTTTGCATAGGCA
GTCCATAGAGATTTCACAAGTGGAATCTAATATTCATAAAGCCGAGGAGAAAAAGAGAAAGGGGGAAGCATCCATTGAGCCGACGAGTAAGAGACTAAATGGAGGTACAG
AACACGAGAAGGGGGAAGAGCGTGAGATTATATTGGCGGCGGTTGCCTCGCAAGCCCGCCAAGCGCCATGA
mRNA sequenceShow/hide mRNA sequence
CCCTAACAAGCAACGTATGTAATGGTTGAAACAATTTTTAAAAACAATTTAAATCAACTAAGAGTGTTCTGTAACGGTTCTTGCGGTTTTCTCTCTAGAACCATTGTACG
ACCTTGCCGGAACTTCTCCGTTAGGAGTCTGTCGACCTCGGGTTGAGTGTCCAGGCTCGCCTGGTTGTGTACTATTTTGGTTGCAATCCTTGGACTCTGTTCGGTAATGG
GTTTCTACAAGTCGATCTGCAGGACACGAGGAATTGATCGAGGACTAGAGCAAACTTAATCTAACTGTTAAGGAAGAAGAGACTTCAGTCGATGTGAAGTTTGATACGAG
AGTGAATGTGGAAGAGGGGCTGGAAAGCTGCCTTGTGGAAAAACTGATCTGCGGAAGAATTGTTTCGGCAGAGGTAATGCGGAATACTTTCAAGGCAGCATGGGAGATCG
AATTGGGGCTCGAGGTCGGGGGTGTTGGCAAGAATTTGTTCTTCTTTCGGTTCCGGAATGAGATGGATTGTCTGAGATTGACTCACGGAGGACCCTAGACATACCGTTGG
CATGCTTCAACAAAGAAATGGCCCAGAGATTGGGTAATGATATGGGTTCCTTTGTGGAGTTTGATGAGGGGAATGGAGAACTGAGTTGGGGGGCGAGCATGAGAGTGAAA
ATTTGGATTGATATAACAAAATCGTTGAGAAGGGGAATAAAACTGAACCTGGATGGTCCCATGGGAGGAGTTCTGATTTCTATCAAGTACGAGAAATTACAAGAATTTTG
TTCTCACTGTGGGATCATAGGACACCATTTCAAGGGCTGCAACCAATTCTACAAGAACTCAACCCAAGGTGTGAAATTTCACCAATATGGACAGTACCTGAGATTCGTGA
ACCAATCTCTAGTGATAGCCCGCTCCCCTACTTCAGATGATCACAAGAAGCATCATTCTAGTGAGAAAACGACAGCAACGAGGCTGGGTACAACAATGGCTACTTCTCCG
GCGTCTTCTGTGAAATCAGGAACGGAGGGATCTCCGTCAGCGATCAACATCGGTTGGATCTCCAAGTCACCGGCGCCGGGAGGATCTTGCGGCGAAGATGGAGAACACGC
AAAAAAAGTGGAAGAAGCTTCGATCAAGGAAGTGGACAGTTTAATTGATGGGCTTTTGCATGCCAGTAGGCTGGACAAGCTCGTGGGCCTTTCAGTGCACAAGGAACAGG
CGGTTTTGGTCGATCCCATCACAGTCACAATGGTGGGCCTAAAGGAGGATGGGTCTGGTAAGCCTCTAGCTGAAAATTCAACTCCAACCTCAGTCATTGGGAAGAAACTT
TCACGTTTGCATAGGCAGTCCATAGAGATTTCACAAGTGGAATCTAATATTCATAAAGCCGAGGAGAAAAAGAGAAAGGGGGAAGCATCCATTGAGCCGACGAGTAAGAG
ACTAAATGGAGGTACAGAACACGAGAAGGGGGAAGAGCGTGAGATTATATTGGCGGCGGTTGCCTCGCAAGCCCGCCAAGCGCCATGA
Protein sequenceShow/hide protein sequence
MAQRLGNDMGSFVEFDEGNGELSWGASMRVKIWIDITKSLRRGIKLNLDGPMGGVLISIKYEKLQEFCSHCGIIGHHFKGCNQFYKNSTQGVKFHQYGQYLRFVNQSLVI
ARSPTSDDHKKHHSSEKTTATRLGTTMATSPASSVKSGTEGSPSAINIGWISKSPAPGGSCGEDGEHAKKVEEASIKEVDSLIDGLLHASRLDKLVGLSVHKEQAVLVDP
ITVTMVGLKEDGSGKPLAENSTPTSVIGKKLSRLHRQSIEISQVESNIHKAEEKKRKGEASIEPTSKRLNGGTEHEKGEEREIILAAVASQARQAP