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Tan0017219 (gene) of Snake gourd v1 genome

Gene IDTan0017219
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionUnknown protein
Genome locationLG07:37592610..37593433
RNA-Seq ExpressionTan0017219
SyntenyTan0017219
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_038888747.1 vicilin-like seed storage protein At2g18540 [Benincasa hispida]1.9e-0530.56Show/hide
Query:  INLVRMFYRGMAYEEVSMSIIRGKLVSFSIVDIKMMYKLNLTIRSWGNEVIRSPTEKKRKEDLNILTHKVTKLRLSTTRIRTLVPSDTLDEPVVWFHIIK
        + +VR FY G  ++     I++G  V FS  DI  +YK+   + + GN++I  P E   ++ L +L    T+  +S   I+TL  +  L E  +W +++K
Subjt:  INLVRMFYRGMAYEEVSMSIIRGKLVSFSIVDIKMMYKLNLTIRSWGNEVIRSPTEKKRKEDLNILTHKVTKLRLSTTRIRTLVPSDTLDEPVVWFHIIK

Query:  NRIILMTH
         R+I  +H
Subjt:  NRIILMTH

XP_038898613.1 LOW QUALITY PROTEIN: uncharacterized protein LOC120086174 [Benincasa hispida]5.5e-0827.89Show/hide
Query:  DMMLEKGFLDIVGQFLEFITKVLTHYKWKELCVHPLAAKINLVRMFYRGMAYEEVSMSIIRGKLVSFSIVDIKMMYKLNLTIRSWGNEVIRSPTEKKRKE
        DM++E GF        + IT ++  + W      P      +V  FYRG  +E       +G+ V FS  +I  +Y++     + GN++I  PTE+  + 
Subjt:  DMMLEKGFLDIVGQFLEFITKVLTHYKWKELCVHPLAAKINLVRMFYRGMAYEEVSMSIIRGKLVSFSIVDIKMMYKLNLTIRSWGNEVIRSPTEKKRKE

Query:  DLNILTHKVTKLRLSTTRIRTLVPSDTLDEPVVWFHIIKNRIILMTH
         L +L    T+  +S   IRTL     L +  +W +++K ++I  TH
Subjt:  DLNILTHKVTKLRLSTTRIRTLVPSDTLDEPVVWFHIIKNRIILMTH

XP_038904385.1 uncharacterized protein LOC120090747 [Benincasa hispida]1.7e-0932.89Show/hide
Query:  DMMLEKGFLDIVGQFLEFITKVLTHYKWKEL--CVHPLAAKINLVRMFYRGMAYEEVSMSIIRGKLVSFSIVDIKMMYKLNLTIRSWGNEVIRSPTEKKR
        DMM+E GF+       +F + VL H  W+    C+  +   +  VR FY+G  +      I++G +V FS  DI  +YK+     + GN++I  P E+K 
Subjt:  DMMLEKGFLDIVGQFLEFITKVLTHYKWKEL--CVHPLAAKINLVRMFYRGMAYEEVSMSIIRGKLVSFSIVDIKMMYKLNLTIRSWGNEVIRSPTEKKR

Query:  KEDLNILTHKVTKLRLSTTRIRTLVPSDTLDEPVVWFHIIKNRIILMTH
        ++ L  LT   T+  +S   I+TL  S  L E  +W +++K RII  +H
Subjt:  KEDLNILTHKVTKLRLSTTRIRTLVPSDTLDEPVVWFHIIKNRIILMTH

TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACACCCGAATCTAGATCCTCATCAGGGGAAGAGAATGAGAATGATGAAAAAGAAGGGGAGGAGGTTGTGGAGACTGAAGATGAGGTAGTAGAATTTGATGATGATCG
AATTCTAGTCTCCTCGGTTATGAGGAATAGAAGAAAAGAAGAAGATGGCCAACAACGAGGTCAACTCATGGCTCACCCATGCAAGCACGAACACCATCACCATCACCATC
ACAGAGAAACATTCAAAGAGGTTGATGTTAAAAGCATGCTGGAGATAGTAAAGGGAAGAGACATGATGCTTGAGAAAGGCTTCTTAGACATTGTTGGACAATTCCTTGAG
TTTATCACCAAAGTCCTTACCCATTACAAGTGGAAAGAGCTTTGTGTCCATCCTCTCGCAGCCAAGATCAACTTAGTAAGAATGTTTTATAGGGGTATGGCATATGAAGA
GGTGAGCATGTCGATCATTAGAGGCAAACTAGTGAGCTTCTCGATTGTGGACATCAAGATGATGTATAAACTAAATTTGACCATCCGTTCTTGGGGTAATGAGGTCATTA
GAAGCCCCACTGAGAAGAAACGCAAGGAAGACCTCAACATTTTAACCCATAAGGTGACTAAATTGAGATTATCAACCACAAGGATCAGAACCTTGGTCCCAAGTGATACA
TTGGATGAGCCAGTCGTGTGGTTTCATATCATCAAGAATAGGATTATTCTCATGACTCATTATATTTCAAGAAAGGGTCATGCTCCTTTATTGTTTGTACAAGGCAATGG
ACTTAAATAA
mRNA sequenceShow/hide mRNA sequence
ATGACACCCGAATCTAGATCCTCATCAGGGGAAGAGAATGAGAATGATGAAAAAGAAGGGGAGGAGGTTGTGGAGACTGAAGATGAGGTAGTAGAATTTGATGATGATCG
AATTCTAGTCTCCTCGGTTATGAGGAATAGAAGAAAAGAAGAAGATGGCCAACAACGAGGTCAACTCATGGCTCACCCATGCAAGCACGAACACCATCACCATCACCATC
ACAGAGAAACATTCAAAGAGGTTGATGTTAAAAGCATGCTGGAGATAGTAAAGGGAAGAGACATGATGCTTGAGAAAGGCTTCTTAGACATTGTTGGACAATTCCTTGAG
TTTATCACCAAAGTCCTTACCCATTACAAGTGGAAAGAGCTTTGTGTCCATCCTCTCGCAGCCAAGATCAACTTAGTAAGAATGTTTTATAGGGGTATGGCATATGAAGA
GGTGAGCATGTCGATCATTAGAGGCAAACTAGTGAGCTTCTCGATTGTGGACATCAAGATGATGTATAAACTAAATTTGACCATCCGTTCTTGGGGTAATGAGGTCATTA
GAAGCCCCACTGAGAAGAAACGCAAGGAAGACCTCAACATTTTAACCCATAAGGTGACTAAATTGAGATTATCAACCACAAGGATCAGAACCTTGGTCCCAAGTGATACA
TTGGATGAGCCAGTCGTGTGGTTTCATATCATCAAGAATAGGATTATTCTCATGACTCATTATATTTCAAGAAAGGGTCATGCTCCTTTATTGTTTGTACAAGGCAATGG
ACTTAAATAA
Protein sequenceShow/hide protein sequence
MTPESRSSSGEENENDEKEGEEVVETEDEVVEFDDDRILVSSVMRNRRKEEDGQQRGQLMAHPCKHEHHHHHHHRETFKEVDVKSMLEIVKGRDMMLEKGFLDIVGQFLE
FITKVLTHYKWKELCVHPLAAKINLVRMFYRGMAYEEVSMSIIRGKLVSFSIVDIKMMYKLNLTIRSWGNEVIRSPTEKKRKEDLNILTHKVTKLRLSTTRIRTLVPSDT
LDEPVVWFHIIKNRIILMTHYISRKGHAPLLFVQGNGLK