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Tan0017221 (gene) of Snake gourd v1 genome

Gene IDTan0017221
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionCopper transport protein like
Genome locationLG04:5974089..5976520
RNA-Seq ExpressionTan0017221
SyntenyTan0017221
Gene Ontology termsGO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR006121 - Heavy metal-associated domain, HMA
IPR036163 - Heavy metal-associated domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6573880.1 Copper transport protein ATX1, partial [Cucurbita argyrosperma subsp. sororia]1.1e-3374.22Show/hide
Query:  MSQTTVLKVAMSCQGCVGAVKRVLGKLEGVETFDIDIDAQKVTVKGNVERDVVFQTVSKTGKKTAYWEDEAP---------AAAAP--------------
        MSQTTVLKVAMSCQGCVGAV+RVLGKLEGVETFDIDIDAQKVTVKGNVERDVVFQTVSKTGKKTAYWEDEAP         AAAAP              
Subjt:  MSQTTVLKVAMSCQGCVGAVKRVLGKLEGVETFDIDIDAQKVTVKGNVERDVVFQTVSKTGKKTAYWEDEAP---------AAAAP--------------

Query:  --------EAAPAAPAEAEAKPAETVAA
                EAAPAAPAEAEAKPAET AA
Subjt:  --------EAAPAAPAEAEAKPAETVAA

XP_008446769.1 PREDICTED: copper transport protein ATX1-like [Cucumis melo]2.4e-3389.8Show/hide
Query:  MSQTTVLKVAMSCQGCVGAVKRVLGKLEGVETFDIDIDAQKVTVKGNVERDVVFQTVSKTGKKTAYWEDEAPAAAAPEAAPAAPAEAEAKPAETVAAA
        MSQTTVLKVAMSCQGCVGAVKRVLGKLEGV+TFDIDIDAQKVTVKGNVERDVVFQTVSKTGKKTAYWED+  A+AAP A P APAEAEAKPAE +AAA
Subjt:  MSQTTVLKVAMSCQGCVGAVKRVLGKLEGVETFDIDIDAQKVTVKGNVERDVVFQTVSKTGKKTAYWEDEAPAAAAPEAAPAAPAEAEAKPAETVAAA

XP_022968570.1 copper transport protein ATX1-like isoform X2 [Cucurbita maxima]7.5e-3584.55Show/hide
Query:  MSQTTVLKVAMSCQGCVGAVKRVLGKLEGVETFDIDIDAQKVTVKGNVERDVVFQTVSKTGKKTAYWEDEAPAAA-----------APEAAPAA--PAEA
        MSQTTVLKVAMSCQGCVGAV+RVLGKLEGV+ FDIDIDAQKVTVKGNVERDVVFQTVSKTGKKTAYWEDEAPAAA           APEAAPAA  PAEA
Subjt:  MSQTTVLKVAMSCQGCVGAVKRVLGKLEGVETFDIDIDAQKVTVKGNVERDVVFQTVSKTGKKTAYWEDEAPAAA-----------APEAAPAA--PAEA

Query:  EAKPAETVAA
        EAKPAE+VAA
Subjt:  EAKPAETVAA

XP_022968572.1 copper transport protein ATX1-like isoform X3 [Cucurbita maxima]1.7e-3485.19Show/hide
Query:  MSQTTVLKVAMSCQGCVGAVKRVLGKLEGVETFDIDIDAQKVTVKGNVERDVVFQTVSKTGKKTAYWEDEAP---------AAAAPEAAPAA--PAEAEA
        MSQTTVLKVAMSCQGCVGAV+RVLGKLEGV+ FDIDIDAQKVTVKGNVERDVVFQTVSKTGKKTAYWEDEAP         AA APEAAPAA  PAEAEA
Subjt:  MSQTTVLKVAMSCQGCVGAVKRVLGKLEGVETFDIDIDAQKVTVKGNVERDVVFQTVSKTGKKTAYWEDEAP---------AAAAPEAAPAA--PAEAEA

Query:  KPAETVAA
        KPAE+VAA
Subjt:  KPAETVAA

XP_038893429.1 copper transport protein ATX1-like [Benincasa hispida]1.2e-3590.1Show/hide
Query:  MSQTTVLKVAMSCQGCVGAVKRVLGKLEGVETFDIDIDAQKVTVKGNVERDVVFQTVSKTGKKTAYWEDEAPAAAAPEAAPA---APAEAEAKPAETVAA
        MSQTTVLKVAMSCQGCVGAVKRVLGKLEGVE FDIDIDAQKVTVKGNVER+VVFQTVSKTGKKTAYWE++APAA+A EA PA   APAEAEAKPAETVAA
Subjt:  MSQTTVLKVAMSCQGCVGAVKRVLGKLEGVETFDIDIDAQKVTVKGNVERDVVFQTVSKTGKKTAYWEDEAPAAAAPEAAPA---APAEAEAKPAETVAA

Query:  A
        A
Subjt:  A

TrEMBL top hitse value%identityAlignment
A0A1S3BFW4 copper transport protein ATX1-like1.2e-3389.8Show/hide
Query:  MSQTTVLKVAMSCQGCVGAVKRVLGKLEGVETFDIDIDAQKVTVKGNVERDVVFQTVSKTGKKTAYWEDEAPAAAAPEAAPAAPAEAEAKPAETVAAA
        MSQTTVLKVAMSCQGCVGAVKRVLGKLEGV+TFDIDIDAQKVTVKGNVERDVVFQTVSKTGKKTAYWED+  A+AAP A P APAEAEAKPAE +AAA
Subjt:  MSQTTVLKVAMSCQGCVGAVKRVLGKLEGVETFDIDIDAQKVTVKGNVERDVVFQTVSKTGKKTAYWEDEAPAAAAPEAAPAAPAEAEAKPAETVAAA

A0A5A7SZ31 Copper transport protein ATX1-like1.2e-3389.8Show/hide
Query:  MSQTTVLKVAMSCQGCVGAVKRVLGKLEGVETFDIDIDAQKVTVKGNVERDVVFQTVSKTGKKTAYWEDEAPAAAAPEAAPAAPAEAEAKPAETVAAA
        MSQTTVLKVAMSCQGCVGAVKRVLGKLEGV+TFDIDIDAQKVTVKGNVERDVVFQTVSKTGKKTAYWED+  A+AAP A P APAEAEAKPAE +AAA
Subjt:  MSQTTVLKVAMSCQGCVGAVKRVLGKLEGVETFDIDIDAQKVTVKGNVERDVVFQTVSKTGKKTAYWEDEAPAAAAPEAAPAAPAEAEAKPAETVAAA

A0A6J1HTV3 copper transport protein ATX1-like isoform X38.1e-3585.19Show/hide
Query:  MSQTTVLKVAMSCQGCVGAVKRVLGKLEGVETFDIDIDAQKVTVKGNVERDVVFQTVSKTGKKTAYWEDEAP---------AAAAPEAAPAA--PAEAEA
        MSQTTVLKVAMSCQGCVGAV+RVLGKLEGV+ FDIDIDAQKVTVKGNVERDVVFQTVSKTGKKTAYWEDEAP         AA APEAAPAA  PAEAEA
Subjt:  MSQTTVLKVAMSCQGCVGAVKRVLGKLEGVETFDIDIDAQKVTVKGNVERDVVFQTVSKTGKKTAYWEDEAP---------AAAAPEAAPAA--PAEAEA

Query:  KPAETVAA
        KPAE+VAA
Subjt:  KPAETVAA

A0A6J1HXJ6 copper transport protein ATX1-like isoform X23.6e-3584.55Show/hide
Query:  MSQTTVLKVAMSCQGCVGAVKRVLGKLEGVETFDIDIDAQKVTVKGNVERDVVFQTVSKTGKKTAYWEDEAPAAA-----------APEAAPAA--PAEA
        MSQTTVLKVAMSCQGCVGAV+RVLGKLEGV+ FDIDIDAQKVTVKGNVERDVVFQTVSKTGKKTAYWEDEAPAAA           APEAAPAA  PAEA
Subjt:  MSQTTVLKVAMSCQGCVGAVKRVLGKLEGVETFDIDIDAQKVTVKGNVERDVVFQTVSKTGKKTAYWEDEAPAAA-----------APEAAPAA--PAEA

Query:  EAKPAETVAA
        EAKPAE+VAA
Subjt:  EAKPAETVAA

A0A6J1I011 copper transport protein ATX1-like isoform X12.0e-3374.4Show/hide
Query:  MSQTTVLKVAMSCQGCVGAVKRVLGKLEGVETFDIDIDAQKVTVKGNVERDVVFQTVSKTGKKTAYWEDEAPAAA-------------------------
        MSQTTVLKVAMSCQGCVGAV+RVLGKLEGV+ FDIDIDAQKVTVKGNVERDVVFQTVSKTGKKTAYWEDEAPAAA                         
Subjt:  MSQTTVLKVAMSCQGCVGAVKRVLGKLEGVETFDIDIDAQKVTVKGNVERDVVFQTVSKTGKKTAYWEDEAPAAA-------------------------

Query:  -APEAAPAA--PAEAEAKPAETVAA
         APEAAPAA  PAEAEAKPAE+VAA
Subjt:  -APEAAPAA--PAEAEAKPAETVAA

SwissProt top hitse value%identityAlignment
B3H6D0 Heavy metal-associated isoprenylated plant protein 451.8e-1049.18Show/hide
Query:  LKVAMSCQGCVGAVKRVLGKLEGVETFDIDIDAQKVTVKGNVERDVVFQTVSKTGKKTAYW
        L V M C+GC   V+R + KL+GV+T +ID+D QKVTV G V+R+ V + V +TG+   YW
Subjt:  LKVAMSCQGCVGAVKRVLGKLEGVETFDIDIDAQKVTVKGNVERDVVFQTVSKTGKKTAYW

F4JZL7 Heavy metal-associated isoprenylated plant protein 339.6e-0947.69Show/hide
Query:  QTTVLKVAMSCQGCVGAVKRVLGKLEGVETFDIDIDAQKVTVKGNVERDVVFQTVSKTGKKTAYW
        QT VLKV + C GC   VK++L K+EGV T  ID +  KVTV GNV+  V+ + + K+GK    W
Subjt:  QTTVLKVAMSCQGCVGAVKRVLGKLEGVETFDIDIDAQKVTVKGNVERDVVFQTVSKTGKKTAYW

O82089 Copper transport protein CCH2.4e-2367.68Show/hide
Query:  MSQTTVLKVAMSCQGCVGAVKRVLGKLEGVETFDIDIDAQKVTVKGNVERDVVFQTVSKTGKKTAYWEDEAPAAAAPEAAPAAPAEAEAK-PAETVAAA
        M+QT VLKV MSCQGCVGAV RVLGK+EGVE+FDIDI  QKVTVKGNVE + VFQTVSKTGKKT+YW  EA A    EA P      E K  AET   A
Subjt:  MSQTTVLKVAMSCQGCVGAVKRVLGKLEGVETFDIDIDAQKVTVKGNVERDVVFQTVSKTGKKTAYWEDEAPAAAAPEAAPAAPAEAEAK-PAETVAAA

Q84J88 Heavy metal-associated isoprenylated plant protein 362.5e-0942.19Show/hide
Query:  TTVLKVAMSCQGCVGAVKRVLGKLEGVETFDIDIDAQKVTVKGNVERDVVFQTVSKTGKKTAYW
        T VL+V++ C+GC   +K++L K++GV T +ID+  QKVTV GNVE +++ + + K G+    W
Subjt:  TTVLKVAMSCQGCVGAVKRVLGKLEGVETFDIDIDAQKVTVKGNVERDVVFQTVSKTGKKTAYW

Q94BT9 Copper transport protein ATX12.1e-2473.68Show/hide
Query:  MSQTTVLKVAMSCQGCVGAVKRVLGKLEGVETFDIDIDAQKVTVKGNVERDVVFQTVSKTGKKTAYWEDEAPAAAA
        MSQT VL+VAM+C+GCVGAVKRVLGK+EGVE+FD+DI  QKVTVKGNV+ D V QTV+KTGKKTA+WE E   A A
Subjt:  MSQTTVLKVAMSCQGCVGAVKRVLGKLEGVETFDIDIDAQKVTVKGNVERDVVFQTVSKTGKKTAYWEDEAPAAAA

Arabidopsis top hitse value%identityAlignment
AT1G66240.1 homolog of anti-oxidant 11.5e-2573.68Show/hide
Query:  MSQTTVLKVAMSCQGCVGAVKRVLGKLEGVETFDIDIDAQKVTVKGNVERDVVFQTVSKTGKKTAYWEDEAPAAAA
        MSQT VL+VAM+C+GCVGAVKRVLGK+EGVE+FD+DI  QKVTVKGNV+ D V QTV+KTGKKTA+WE E   A A
Subjt:  MSQTTVLKVAMSCQGCVGAVKRVLGKLEGVETFDIDIDAQKVTVKGNVERDVVFQTVSKTGKKTAYWEDEAPAAAA

AT1G66240.2 homolog of anti-oxidant 11.7e-2172.73Show/hide
Query:  MSCQGCVGAVKRVLGKLEGVETFDIDIDAQKVTVKGNVERDVVFQTVSKTGKKTAYWEDEAPAAAA
        M+C+GCVGAVKRVLGK+EGVE+FD+DI  QKVTVKGNV+ D V QTV+KTGKKTA+WE E   A A
Subjt:  MSCQGCVGAVKRVLGKLEGVETFDIDIDAQKVTVKGNVERDVVFQTVSKTGKKTAYWEDEAPAAAA

AT3G56240.1 copper chaperone1.7e-2467.68Show/hide
Query:  MSQTTVLKVAMSCQGCVGAVKRVLGKLEGVETFDIDIDAQKVTVKGNVERDVVFQTVSKTGKKTAYWEDEAPAAAAPEAAPAAPAEAEAK-PAETVAAA
        M+QT VLKV MSCQGCVGAV RVLGK+EGVE+FDIDI  QKVTVKGNVE + VFQTVSKTGKKT+YW  EA A    EA P      E K  AET   A
Subjt:  MSQTTVLKVAMSCQGCVGAVKRVLGKLEGVETFDIDIDAQKVTVKGNVERDVVFQTVSKTGKKTAYWEDEAPAAAAPEAAPAAPAEAEAK-PAETVAAA

AT3G56891.1 Heavy metal transport/detoxification superfamily protein1.2e-1149.18Show/hide
Query:  LKVAMSCQGCVGAVKRVLGKLEGVETFDIDIDAQKVTVKGNVERDVVFQTVSKTGKKTAYW
        L V M C+GC   V+R + KL+GV+T +ID+D QKVTV G V+R+ V + V +TG+   YW
Subjt:  LKVAMSCQGCVGAVKRVLGKLEGVETFDIDIDAQKVTVKGNVERDVVFQTVSKTGKKTAYW

AT5G27690.1 Heavy metal transport/detoxification superfamily protein1.8e-1042.19Show/hide
Query:  TTVLKVAMSCQGCVGAVKRVLGKLEGVETFDIDIDAQKVTVKGNVERDVVFQTVSKTGKKTAYW
        T VL+V++ C+GC   +K++L K++GV T +ID+  QKVTV GNVE +++ + + K G+    W
Subjt:  TTVLKVAMSCQGCVGAVKRVLGKLEGVETFDIDIDAQKVTVKGNVERDVVFQTVSKTGKKTAYW


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTCAGACTACCGTCCTCAAGGTTGCTATGTCATGTCAAGGCTGTGTTGGAGCGGTCAAAAGGGTCTTGGGGAAACTGGAAGGAGTCGAGACATTTGACATCGATAT
AGATGCACAAAAGGTGACTGTGAAAGGCAACGTGGAGCGCGATGTAGTTTTTCAAACTGTTTCGAAAACCGGTAAGAAGACAGCCTACTGGGAAGATGAAGCCCCAGCAG
CAGCTGCACCGGAGGCTGCCCCAGCAGCACCAGCTGAAGCAGAAGCAAAACCTGCCGAGACTGTGGCTGCTGCTTGA
mRNA sequenceShow/hide mRNA sequence
AAGTTATCTTGTTAGGAATCGGGCGAAAATTATTTTTAAAATTATTGTCGATTCGGTTGACCCGACCCACCAAACAGAGTCTATTAAAGCCGGGTGAAAGCCTGGCAATA
CCCAGTAGCGCAGAGATCGGTGAGGGCGAATTTTCCAAGACTTTTTCGTCAGTTTCTCTTCCGAATTTCTGTAATCTGTAACCATGTCTCAGACTACCGTCCTCAAGGTT
GCTATGTCATGTCAAGGCTGTGTTGGAGCGGTCAAAAGGGTCTTGGGGAAACTGGAAGGAGTCGAGACATTTGACATCGATATAGATGCACAAAAGGTGACTGTGAAAGG
CAACGTGGAGCGCGATGTAGTTTTTCAAACTGTTTCGAAAACCGGTAAGAAGACAGCCTACTGGGAAGATGAAGCCCCAGCAGCAGCTGCACCGGAGGCTGCCCCAGCAG
CACCAGCTGAAGCAGAAGCAAAACCTGCCGAGACTGTGGCTGCTGCTTGAAGTTTTACTTCCATTTACTTCATGGAAATTTTCTGTTCAATGCATAAGGTCTTTGCTTCC
TGAAGCTAATAATAATGTATTAGTACGCGAACTTGGCTATTAAATCTGTAATATTTTGATTTAAGTTCCTCTTGTATGACCTACATTAAAACTTAACTATAGTCTATAGA
TGTATTTCTGGTTTTGCCTCGATTCTTTTGTCCATTTCAGCCTTCTGCTTCTTTGTGTAATAATTTTTTAGAGGTTGTTTGGGGTGTTGGGTGAATTATAATAGTCTGTG
AGTTATAATAGTATGTGTAATTATATAGTATTATTTAAAATGTAGAGTTGTTTAATCTTGAATTATAATAGTATGTATTTGGGGTGCAAAGTACTCCACAAATTATTATA
ACACAAG
Protein sequenceShow/hide protein sequence
MSQTTVLKVAMSCQGCVGAVKRVLGKLEGVETFDIDIDAQKVTVKGNVERDVVFQTVSKTGKKTAYWEDEAPAAAAPEAAPAAPAEAEAKPAETVAAA