; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0017244 (gene) of Snake gourd v1 genome

Gene IDTan0017244
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationLG03:64968941..64969585
RNA-Seq ExpressionTan0017244
SyntenyTan0017244
Gene Ontology termsGO:0006259 - DNA metabolic process (biological process)
GO:0003824 - catalytic activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0032811.1 uncharacterized protein E6C27_scaffold708G00650 [Cucumis melo var. makuwa]2.7e-3748.61Show/hide
Query:  GKEKRTS----MTPTLVQPSALQQLGTLTKERKNIPSTSNVTRPSAFHRL-----------SVATSKSEGPS-MSVFDRLQHDCLIETSKDKSSVETKDE
        G  +RTS    ++  + +    ++L     +RK+  STSN+ R SAF RL           S+ T K E  S + V+ R++H  +  +   +   E K +
Subjt:  GKEKRTS----MTPTLVQPSALQQLGTLTKERKNIPSTSNVTRPSAFHRL-----------SVATSKSEGPS-MSVFDRLQHDCLIETSKDKSSVETKDE

Query:  QEICNAFPSRMKRKTFVTVNT-EGVLKVKRHDIVFTNPSREDPEHEEGETSCHHIMVKEETETEMFNEDAEEAPLSLEDGNQSTVDELKEVNLGTPEESH
        +EI +  PSRMKRKTFVT+NT +G LKVKRHD++ TNP +ED E  EGE SCHHI + EE E E   EDAE+ P SLEDG QSTVDELKEVNLGT EE H
Subjt:  QEICNAFPSRMKRKTFVTVNT-EGVLKVKRHDIVFTNPSREDPEHEEGETSCHHIMVKEETETEMFNEDAEEAPLSLEDGNQSTVDELKEVNLGTPEESH

Query:  PTFISASLTSYKDVKF
        PTFISASL+S ++ K+
Subjt:  PTFISASLTSYKDVKF

KAA0059903.1 uncharacterized protein E6C27_scaffold108G002020 [Cucumis melo var. makuwa]2.3e-3646.52Show/hide
Query:  KEKRTSMTPTLVQPSALQQLGTLTKERKNIPSTSNVTRPSAFHRLSVATSK-SEGPSMSVFDRL-------QHDCLIETSKDKSS---------------
        + K    T  L Q SA Q+L    KE K I   S  T+PSAF RLS+   K ++ P   + + L       Q D  I+T K++S+               
Subjt:  KEKRTSMTPTLVQPSALQQLGTLTKERKNIPSTSNVTRPSAFHRLSVATSK-SEGPSMSVFDRL-------QHDCLIETSKDKSS---------------

Query:  --------VETKDEQEICNAFPSRMKRKTFVTVNT-EGVLKVKRHDIVFTNPSREDPEHEEGETSCHHIMVKEETETEMFNEDAEEAPLSLEDGNQSTVD
                 E K E+EI +   SRMKRKTFVT+NT +G LKVKRHD++ TNP +ED E  EGE SC HI + EE E     ED E+AP SLEDG+QST+D
Subjt:  --------VETKDEQEICNAFPSRMKRKTFVTVNT-EGVLKVKRHDIVFTNPSREDPEHEEGETSCHHIMVKEETETEMFNEDAEEAPLSLEDGNQSTVD

Query:  ELKEVNLGTPEESHPTFISASLTSYKDVKF
        ELKEVNLGT EE HPTFISASL+S ++ K+
Subjt:  ELKEVNLGTPEESHPTFISASLTSYKDVKF

KAA0062018.1 uncharacterized protein E6C27_scaffold89G003490 [Cucumis melo var. makuwa]9.3e-3846.38Show/hide
Query:  GKEKRTS----MTPTLVQPSALQQLGTLTKERKNIPSTSNVTRPSAFHRLSVATSK-SEGPSMSVFDRL-------QHDCLIETSKDKSS----------
        G  +RTS    ++P + +    ++L  +  ERK+  STSN+ R SAF RLS+   K ++ P   + +RL       Q D  I+T K +S+          
Subjt:  GKEKRTS----MTPTLVQPSALQQLGTLTKERKNIPSTSNVTRPSAFHRLSVATSK-SEGPSMSVFDRL-------QHDCLIETSKDKSS----------

Query:  -------------VETKDEQEICNAFPSRMKRKTFVTVN-TEGVLKVKRHDIVFTNPSREDPEHEEGETSCHHIMVKEETETEMFNEDAEEAPLSLEDGN
                      E K E+EIC+  PSRMKRKTFVT N ++G LKVKRH ++ TNP +ED E +EGE SCHHI + EE E E   EDAE+AP SLEDG 
Subjt:  -------------VETKDEQEICNAFPSRMKRKTFVTVN-TEGVLKVKRHDIVFTNPSREDPEHEEGETSCHHIMVKEETETEMFNEDAEEAPLSLEDGN

Query:  QSTVDELKEVNLGTPEESHPTFISASLTSYKDVKF
        QSTVDELKEVNLGT EE  PTFI+ASL+S ++ K+
Subjt:  QSTVDELKEVNLGTPEESHPTFISASLTSYKDVKF

TYK05005.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]7.1e-3846.38Show/hide
Query:  GKEKRTS----MTPTLVQPSALQQLGTLTKERKNIPSTSNVTRPSAFHRLSVATSK-SEGPSMSVFDRL-------QHDCLIETSKDKSS----------
        G  +RTS    ++P + +    ++L     ERK+  STSN+ R SAF RLS+   K ++ P   + +RL       Q D  I+  K +S+          
Subjt:  GKEKRTS----MTPTLVQPSALQQLGTLTKERKNIPSTSNVTRPSAFHRLSVATSK-SEGPSMSVFDRL-------QHDCLIETSKDKSS----------

Query:  -------------VETKDEQEICNAFPSRMKRKTFVTVN-TEGVLKVKRHDIVFTNPSREDPEHEEGETSCHHIMVKEETETEMFNEDAEEAPLSLEDGN
                      E K E+EIC+  PSRMKRKTFVT+N ++G LKVKRHD++ TNP +ED E +EGE SCHHI + EE E E   EDAE+AP SLEDG 
Subjt:  -------------VETKDEQEICNAFPSRMKRKTFVTVN-TEGVLKVKRHDIVFTNPSREDPEHEEGETSCHHIMVKEETETEMFNEDAEEAPLSLEDGN

Query:  QSTVDELKEVNLGTPEESHPTFISASLTSYKDVKF
        QSTVDELKEVNLGT EE  PTFI+ASL+S ++ K+
Subjt:  QSTVDELKEVNLGTPEESHPTFISASLTSYKDVKF

TYK28162.1 uncharacterized protein E5676_scaffold289G00760 [Cucumis melo var. makuwa]7.6e-4048.72Show/hide
Query:  MPTGKEKRTSMTPTLVQPSALQQLGTLTKERKNIPSTSNVTRPSAFHRLSVATSK-SEGPSMSVFDRL-------QHDCLIETSKDKSS-----------
        M   + K    T  L Q SA Q+L    KE K I  TS  T+PSAF RLS+   K ++ P   + +RL       Q D  I+T K +S+           
Subjt:  MPTGKEKRTSMTPTLVQPSALQQLGTLTKERKNIPSTSNVTRPSAFHRLSVATSK-SEGPSMSVFDRL-------QHDCLIETSKDKSS-----------

Query:  ------------VETKDEQEICNAFPSRMKRKTFVTVNT-EGVLKVKRHDIVFTNPSREDPEHEEGETSCHHIMVKEETETEMFNEDAEEAPLSLEDGNQ
                     E K E+EI +  PSRMKRKTFVT+NT +G LKVKRHD++ TNP +ED E  E E SCHHI + EE E E   EDAEEAP SLEDG Q
Subjt:  ------------VETKDEQEICNAFPSRMKRKTFVTVNT-EGVLKVKRHDIVFTNPSREDPEHEEGETSCHHIMVKEETETEMFNEDAEEAPLSLEDGNQ

Query:  STVDELKEVNLGTPEESHPTFISASLTSYKDVKF
        STVDELKEVNLGT EE  PTFISASL+S ++ K+
Subjt:  STVDELKEVNLGTPEESHPTFISASLTSYKDVKF

TrEMBL top hitse value%identityAlignment
A0A5A7UVC4 Uncharacterized protein1.1e-3646.52Show/hide
Query:  KEKRTSMTPTLVQPSALQQLGTLTKERKNIPSTSNVTRPSAFHRLSVATSK-SEGPSMSVFDRL-------QHDCLIETSKDKSS---------------
        + K    T  L Q SA Q+L    KE K I   S  T+PSAF RLS+   K ++ P   + + L       Q D  I+T K++S+               
Subjt:  KEKRTSMTPTLVQPSALQQLGTLTKERKNIPSTSNVTRPSAFHRLSVATSK-SEGPSMSVFDRL-------QHDCLIETSKDKSS---------------

Query:  --------VETKDEQEICNAFPSRMKRKTFVTVNT-EGVLKVKRHDIVFTNPSREDPEHEEGETSCHHIMVKEETETEMFNEDAEEAPLSLEDGNQSTVD
                 E K E+EI +   SRMKRKTFVT+NT +G LKVKRHD++ TNP +ED E  EGE SC HI + EE E     ED E+AP SLEDG+QST+D
Subjt:  --------VETKDEQEICNAFPSRMKRKTFVTVNT-EGVLKVKRHDIVFTNPSREDPEHEEGETSCHHIMVKEETETEMFNEDAEEAPLSLEDGNQSTVD

Query:  ELKEVNLGTPEESHPTFISASLTSYKDVKF
        ELKEVNLGT EE HPTFISASL+S ++ K+
Subjt:  ELKEVNLGTPEESHPTFISASLTSYKDVKF

A0A5A7V356 Uncharacterized protein4.5e-3846.38Show/hide
Query:  GKEKRTS----MTPTLVQPSALQQLGTLTKERKNIPSTSNVTRPSAFHRLSVATSK-SEGPSMSVFDRL-------QHDCLIETSKDKSS----------
        G  +RTS    ++P + +    ++L  +  ERK+  STSN+ R SAF RLS+   K ++ P   + +RL       Q D  I+T K +S+          
Subjt:  GKEKRTS----MTPTLVQPSALQQLGTLTKERKNIPSTSNVTRPSAFHRLSVATSK-SEGPSMSVFDRL-------QHDCLIETSKDKSS----------

Query:  -------------VETKDEQEICNAFPSRMKRKTFVTVN-TEGVLKVKRHDIVFTNPSREDPEHEEGETSCHHIMVKEETETEMFNEDAEEAPLSLEDGN
                      E K E+EIC+  PSRMKRKTFVT N ++G LKVKRH ++ TNP +ED E +EGE SCHHI + EE E E   EDAE+AP SLEDG 
Subjt:  -------------VETKDEQEICNAFPSRMKRKTFVTVN-TEGVLKVKRHDIVFTNPSREDPEHEEGETSCHHIMVKEETETEMFNEDAEEAPLSLEDGN

Query:  QSTVDELKEVNLGTPEESHPTFISASLTSYKDVKF
        QSTVDELKEVNLGT EE  PTFI+ASL+S ++ K+
Subjt:  QSTVDELKEVNLGTPEESHPTFISASLTSYKDVKF

A0A5D3C0W6 Ty3-gypsy retrotransposon protein3.5e-3846.38Show/hide
Query:  GKEKRTS----MTPTLVQPSALQQLGTLTKERKNIPSTSNVTRPSAFHRLSVATSK-SEGPSMSVFDRL-------QHDCLIETSKDKSS----------
        G  +RTS    ++P + +    ++L     ERK+  STSN+ R SAF RLS+   K ++ P   + +RL       Q D  I+  K +S+          
Subjt:  GKEKRTS----MTPTLVQPSALQQLGTLTKERKNIPSTSNVTRPSAFHRLSVATSK-SEGPSMSVFDRL-------QHDCLIETSKDKSS----------

Query:  -------------VETKDEQEICNAFPSRMKRKTFVTVN-TEGVLKVKRHDIVFTNPSREDPEHEEGETSCHHIMVKEETETEMFNEDAEEAPLSLEDGN
                      E K E+EIC+  PSRMKRKTFVT+N ++G LKVKRHD++ TNP +ED E +EGE SCHHI + EE E E   EDAE+AP SLEDG 
Subjt:  -------------VETKDEQEICNAFPSRMKRKTFVTVN-TEGVLKVKRHDIVFTNPSREDPEHEEGETSCHHIMVKEETETEMFNEDAEEAPLSLEDGN

Query:  QSTVDELKEVNLGTPEESHPTFISASLTSYKDVKF
        QSTVDELKEVNLGT EE  PTFI+ASL+S ++ K+
Subjt:  QSTVDELKEVNLGTPEESHPTFISASLTSYKDVKF

A0A5D3DXC7 Reverse transcriptase domain-containing protein3.7e-4048.72Show/hide
Query:  MPTGKEKRTSMTPTLVQPSALQQLGTLTKERKNIPSTSNVTRPSAFHRLSVATSK-SEGPSMSVFDRL-------QHDCLIETSKDKSS-----------
        M   + K    T  L Q SA Q+L    KE K I  TS  T+PSAF RLS+   K ++ P   + +RL       Q D  I+T K +S+           
Subjt:  MPTGKEKRTSMTPTLVQPSALQQLGTLTKERKNIPSTSNVTRPSAFHRLSVATSK-SEGPSMSVFDRL-------QHDCLIETSKDKSS-----------

Query:  ------------VETKDEQEICNAFPSRMKRKTFVTVNT-EGVLKVKRHDIVFTNPSREDPEHEEGETSCHHIMVKEETETEMFNEDAEEAPLSLEDGNQ
                     E K E+EI +  PSRMKRKTFVT+NT +G LKVKRHD++ TNP +ED E  E E SCHHI + EE E E   EDAEEAP SLEDG Q
Subjt:  ------------VETKDEQEICNAFPSRMKRKTFVTVNT-EGVLKVKRHDIVFTNPSREDPEHEEGETSCHHIMVKEETETEMFNEDAEEAPLSLEDGNQ

Query:  STVDELKEVNLGTPEESHPTFISASLTSYKDVKF
        STVDELKEVNLGT EE  PTFISASL+S ++ K+
Subjt:  STVDELKEVNLGTPEESHPTFISASLTSYKDVKF

A0A5D3E3K0 Uncharacterized protein1.3e-3748.61Show/hide
Query:  GKEKRTS----MTPTLVQPSALQQLGTLTKERKNIPSTSNVTRPSAFHRL-----------SVATSKSEGPS-MSVFDRLQHDCLIETSKDKSSVETKDE
        G  +RTS    ++  + +    ++L     +RK+  STSN+ R SAF RL           S+ T K E  S + V+ R++H  +  +   +   E K +
Subjt:  GKEKRTS----MTPTLVQPSALQQLGTLTKERKNIPSTSNVTRPSAFHRL-----------SVATSKSEGPS-MSVFDRLQHDCLIETSKDKSSVETKDE

Query:  QEICNAFPSRMKRKTFVTVNT-EGVLKVKRHDIVFTNPSREDPEHEEGETSCHHIMVKEETETEMFNEDAEEAPLSLEDGNQSTVDELKEVNLGTPEESH
        +EI +  PSRMKRKTFVT+NT +G LKVKRHD++ TNP +ED E  EGE SCHHI + EE E E   EDAE+ P SLEDG QSTVDELKEVNLGT EE H
Subjt:  QEICNAFPSRMKRKTFVTVNT-EGVLKVKRHDIVFTNPSREDPEHEEGETSCHHIMVKEETETEMFNEDAEEAPLSLEDGNQSTVDELKEVNLGTPEESH

Query:  PTFISASLTSYKDVKF
        PTFISASL+S ++ K+
Subjt:  PTFISASLTSYKDVKF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCCACTGGTAAAGAAAAAAGAACGTCAATGACTCCAACTTTGGTGCAACCATCAGCGTTGCAACAATTAGGCACACTTACGAAAGAGAGGAAAAATATACCTTCGAC
TTCAAATGTGACACGCCCTTCAGCTTTTCACAGGTTAAGTGTAGCCACGTCAAAAAGTGAGGGTCCTTCCATGTCAGTTTTTGACCGACTTCAACATGATTGCCTGATTG
AAACCTCGAAGGATAAATCCTCTGTTGAAACAAAAGATGAGCAAGAAATTTGCAATGCCTTTCCTTCCCGTATGAAAAGAAAAACCTTCGTTACAGTTAATACAGAGGGT
GTGTTGAAGGTAAAACGACACGATATCGTCTTCACCAACCCCTCAAGAGAGGATCCTGAACATGAAGAAGGCGAGACCTCTTGTCACCATATTATGGTTAAAGAAGAAAC
AGAGACTGAAATGTTCAATGAGGATGCCGAAGAGGCACCATTATCGCTTGAAGATGGCAATCAATCAACAGTAGATGAGCTTAAAGAGGTGAACCTCGGTACGCCGGAAG
AGTCGCACCCAACTTTCATAAGTGCATCGCTCACTTCATATAAAGATGTGAAATTTCAGCCAACAAAAAATTGCCACATCATTAATTTGAATTAA
mRNA sequenceShow/hide mRNA sequence
ATGCCCACTGGTAAAGAAAAAAGAACGTCAATGACTCCAACTTTGGTGCAACCATCAGCGTTGCAACAATTAGGCACACTTACGAAAGAGAGGAAAAATATACCTTCGAC
TTCAAATGTGACACGCCCTTCAGCTTTTCACAGGTTAAGTGTAGCCACGTCAAAAAGTGAGGGTCCTTCCATGTCAGTTTTTGACCGACTTCAACATGATTGCCTGATTG
AAACCTCGAAGGATAAATCCTCTGTTGAAACAAAAGATGAGCAAGAAATTTGCAATGCCTTTCCTTCCCGTATGAAAAGAAAAACCTTCGTTACAGTTAATACAGAGGGT
GTGTTGAAGGTAAAACGACACGATATCGTCTTCACCAACCCCTCAAGAGAGGATCCTGAACATGAAGAAGGCGAGACCTCTTGTCACCATATTATGGTTAAAGAAGAAAC
AGAGACTGAAATGTTCAATGAGGATGCCGAAGAGGCACCATTATCGCTTGAAGATGGCAATCAATCAACAGTAGATGAGCTTAAAGAGGTGAACCTCGGTACGCCGGAAG
AGTCGCACCCAACTTTCATAAGTGCATCGCTCACTTCATATAAAGATGTGAAATTTCAGCCAACAAAAAATTGCCACATCATTAATTTGAATTAA
Protein sequenceShow/hide protein sequence
MPTGKEKRTSMTPTLVQPSALQQLGTLTKERKNIPSTSNVTRPSAFHRLSVATSKSEGPSMSVFDRLQHDCLIETSKDKSSVETKDEQEICNAFPSRMKRKTFVTVNTEG
VLKVKRHDIVFTNPSREDPEHEEGETSCHHIMVKEETETEMFNEDAEEAPLSLEDGNQSTVDELKEVNLGTPEESHPTFISASLTSYKDVKFQPTKNCHIINLN