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Tan0017260 (gene) of Snake gourd v1 genome

Gene IDTan0017260
OrganismTrichosanthes anguina (Snake gourd v1)
Descriptionprotein RALF-like 10
Genome locationLG09:43425113..43425328
RNA-Seq ExpressionTan0017260
SyntenyTan0017260
Gene Ontology termsGO:0110165 - cellular anatomical structure (cellular component)
InterPro domainsIPR008801 - Rapid ALkalinization Factor


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8637268.1 hypothetical protein CSA_017684 [Cucumis sativus]1.1e-0855.07Show/hide
Query:  QSWLICLVLISMLVAGQEVAANITYLKLVD-CNQPNPPPSCSSPNGEGSTPVSVNAYTRGCSAINRCRG
        +SWLIC+V ISMLV  QEV A   +LK  + C+ P+PPPSCSS   +       N Y RGCSAI+RCRG
Subjt:  QSWLICLVLISMLVAGQEVAANITYLKLVD-CNQPNPPPSCSSPNGEGSTPVSVNAYTRGCSAINRCRG

KAG7020863.1 hypothetical protein SDJN02_17551, partial [Cucurbita argyrosperma subsp. argyrosperma]4.4e-0850.7Show/hide
Query:  ICLVLISMLVAGQEVAAN------ITYLKLVDCNQPNPPPSCSSPNGEGSTPVSVNAYTRGCSAINRCRGG
        ICL LI+ML+  Q+V  N      I YLK ++C+ PNPP  CS    +G   V  N Y RGCSAI+RCRGG
Subjt:  ICLVLISMLVAGQEVAAN------ITYLKLVDCNQPNPPPSCSSPNGEGSTPVSVNAYTRGCSAINRCRGG

XP_022947821.1 protein RALF-like 10 [Cucurbita moschata]7.2e-1158.57Show/hide
Query:  QSWLICLVLISMLVAGQEVAANITYLKLVD-CNQPNPPPSCSSPNGEGSTPVSVNAYTRGCSAINRCRGG
        +SWLICLVLI MLV  Q+VA+   +LK  D C QPNPPP CS  N      V  N Y RGCS I RCRGG
Subjt:  QSWLICLVLISMLVAGQEVAANITYLKLVD-CNQPNPPPSCSSPNGEGSTPVSVNAYTRGCSAINRCRGG

XP_023533089.1 protein RALF-like 10 [Cucurbita pepo subsp. pepo]2.7e-1058.57Show/hide
Query:  QSWLICLVLISMLVAGQEVAANITYLKLVD-CNQPNPPPSCSSPNGEGSTPVSVNAYTRGCSAINRCRGG
        +SWLIC+VLISMLV  QEVA+   +LK  D C QPNPP  CS  N      V  N Y RGCS I RCRGG
Subjt:  QSWLICLVLISMLVAGQEVAANITYLKLVD-CNQPNPPPSCSSPNGEGSTPVSVNAYTRGCSAINRCRGG

XP_038877580.1 protein RALF-like 11 [Benincasa hispida]3.8e-1261.43Show/hide
Query:  QSWLICLVLISMLVAGQEVAANITYLKLVD-CNQPNPPPSCSSPNGEGSTPVSVNAYTRGCSAINRCRGG
        +SWLIC+V ISMLV G  VAA   YL+ +D CNQPNPPP+CS    E    V  N Y RGCSAI+RCRGG
Subjt:  QSWLICLVLISMLVAGQEVAANITYLKLVD-CNQPNPPPSCSSPNGEGSTPVSVNAYTRGCSAINRCRGG

TrEMBL top hitse value%identityAlignment
A0A0A0LI94 Uncharacterized protein4.1e-1261.43Show/hide
Query:  QSWLICLVLISMLVAGQEVAANITYLKLVD-CNQPNPPPSCSSPNGEGSTPVSVNAYTRGCSAINRCRGG
        +SWLICL LI MLV GQEVAA   +LK +D CNQP+PPP+C  PN +       N Y R CSAINRCRGG
Subjt:  QSWLICLVLISMLVAGQEVAANITYLKLVD-CNQPNPPPSCSSPNGEGSTPVSVNAYTRGCSAINRCRGG

A0A0A0M0X3 Uncharacterized protein5.5e-0955.07Show/hide
Query:  QSWLICLVLISMLVAGQEVAANITYLKLVD-CNQPNPPPSCSSPNGEGSTPVSVNAYTRGCSAINRCRG
        +SWLIC+V ISMLV  QEV A   +LK  + C+ P+PPPSCSS   +       N Y RGCSAI+RCRG
Subjt:  QSWLICLVLISMLVAGQEVAANITYLKLVD-CNQPNPPPSCSSPNGEGSTPVSVNAYTRGCSAINRCRG

A0A1S4DY33 protein RALF-like 306.1e-0854.29Show/hide
Query:  QSWLICLVLISMLVAGQEVAANITYLKLVD-CNQPNPPPSCSSPNGEGSTPVSVNAYTRGCSAINRCRGG
        +SWLIC  L+SMLV G EVAA   +LK +D C QP+PP SC   +    +P+   AY RGCS I RCRGG
Subjt:  QSWLICLVLISMLVAGQEVAANITYLKLVD-CNQPNPPPSCSSPNGEGSTPVSVNAYTRGCSAINRCRGG

A0A5S9WZ68 (thale cress) hypothetical protein5.2e-0744.93Show/hide
Query:  QSWLICLVLISMLVAGQEVAAN--ITYLKLVDCNQPNPPPSCSSPNGEGSTPVSVNAYTRGCSAINRCR
        ++WLICL++I   V  + V +   I Y  +  C  PNPPP C+ P  E   P  VN Y+RGCS I+RCR
Subjt:  QSWLICLVLISMLVAGQEVAAN--ITYLKLVDCNQPNPPPSCSSPNGEGSTPVSVNAYTRGCSAINRCR

A0A6J1G7J2 protein RALF-like 103.5e-1158.57Show/hide
Query:  QSWLICLVLISMLVAGQEVAANITYLKLVD-CNQPNPPPSCSSPNGEGSTPVSVNAYTRGCSAINRCRGG
        +SWLICLVLI MLV  Q+VA+   +LK  D C QPNPPP CS  N      V  N Y RGCS I RCRGG
Subjt:  QSWLICLVLISMLVAGQEVAANITYLKLVD-CNQPNPPPSCSSPNGEGSTPVSVNAYTRGCSAINRCRGG

SwissProt top hitse value%identityAlignment
F4ISE1 Protein RALF-like 127.7e-0842.03Show/hide
Query:  QSWLICLVLISMLVAGQEVAAN--ITYLKLVDCNQPNPPPSCSSPNGEGSTPVSVNAYTRGCSAINRCR
        ++W+I L++I  +V  + V +   I Y  +  C  PNPPP C+ P  E   P  VN Y+RGCS I+RCR
Subjt:  QSWLICLVLISMLVAGQEVAAN--ITYLKLVDCNQPNPPPSCSSPNGEGSTPVSVNAYTRGCSAINRCR

F4ISE2 Protein RALF-like 137.0e-0943.48Show/hide
Query:  QSWLICLVLISMLVAGQEVAAN--ITYLKLVDCNQPNPPPSCSSPNGEGSTPVSVNAYTRGCSAINRCR
        ++W+ICL++I   V  + V +   I Y  +  C  PNPPP C+ P  E   P  VN Y+RGCS I+RCR
Subjt:  QSWLICLVLISMLVAGQEVAAN--ITYLKLVDCNQPNPPPSCSSPNGEGSTPVSVNAYTRGCSAINRCR

O64466 Protein RALF-like 111.4e-0944.93Show/hide
Query:  QSWLICLVLISMLVAGQEVAAN--ITYLKLVDCNQPNPPPSCSSPNGEGSTPVSVNAYTRGCSAINRCR
        ++WLICL++I   V  + V +   I Y  +  C  PNPPP C+ P  E   P  VN Y+RGCS I+RCR
Subjt:  QSWLICLVLISMLVAGQEVAAN--ITYLKLVDCNQPNPPPSCSSPNGEGSTPVSVNAYTRGCSAINRCR

Q0V822 Protein RALF-like 268.8e-0437.5Show/hide
Query:  QSWLICLVLI--SMLVAGQEVAANITYLK---LVDCNQPNPPPSCSSPNGEGSTPVSVNAYTRGCSAINRCR
        ++W+I L++I  +++V   E      YL    L  C  PNPP  C   N      V V+ Y+RGCS I RCR
Subjt:  QSWLICLVLI--SMLVAGQEVAANITYLK---LVDCNQPNPPPSCSSPNGEGSTPVSVNAYTRGCSAINRCR

Q9LSG0 Protein RALF-like 251.2e-0545.83Show/hide
Query:  MKQSWLICLVLISMLVAGQEVAANIT---YLKLVDCNQPNPPPSCSSPNGEGSTPVSVNAYTRGCSAINRCR
        MK   +I LV+ S+L+ G+ V AN     YL L  C +PN PP C     +  TP  VN Y+RGC+ INRCR
Subjt:  MKQSWLICLVLISMLVAGQEVAANIT---YLKLVDCNQPNPPPSCSSPNGEGSTPVSVNAYTRGCSAINRCR

Arabidopsis top hitse value%identityAlignment
AT2G19030.1 ralf-like 111.0e-1044.93Show/hide
Query:  QSWLICLVLISMLVAGQEVAAN--ITYLKLVDCNQPNPPPSCSSPNGEGSTPVSVNAYTRGCSAINRCR
        ++WLICL++I   V  + V +   I Y  +  C  PNPPP C+ P  E   P  VN Y+RGCS I+RCR
Subjt:  QSWLICLVLISMLVAGQEVAAN--ITYLKLVDCNQPNPPPSCSSPNGEGSTPVSVNAYTRGCSAINRCR

AT2G19040.1 RALF-like 125.5e-0942.03Show/hide
Query:  QSWLICLVLISMLVAGQEVAAN--ITYLKLVDCNQPNPPPSCSSPNGEGSTPVSVNAYTRGCSAINRCR
        ++W+I L++I  +V  + V +   I Y  +  C  PNPPP C+ P  E   P  VN Y+RGCS I+RCR
Subjt:  QSWLICLVLISMLVAGQEVAAN--ITYLKLVDCNQPNPPPSCSSPNGEGSTPVSVNAYTRGCSAINRCR

AT2G19045.1 RALF-like 135.0e-1043.48Show/hide
Query:  QSWLICLVLISMLVAGQEVAAN--ITYLKLVDCNQPNPPPSCSSPNGEGSTPVSVNAYTRGCSAINRCR
        ++W+ICL++I   V  + V +   I Y  +  C  PNPPP C+ P  E   P  VN Y+RGCS I+RCR
Subjt:  QSWLICLVLISMLVAGQEVAAN--ITYLKLVDCNQPNPPPSCSSPNGEGSTPVSVNAYTRGCSAINRCR

AT3G25165.1 ralf-like 258.8e-0745.83Show/hide
Query:  MKQSWLICLVLISMLVAGQEVAANIT---YLKLVDCNQPNPPPSCSSPNGEGSTPVSVNAYTRGCSAINRCR
        MK   +I LV+ S+L+ G+ V AN     YL L  C +PN PP C     +  TP  VN Y+RGC+ INRCR
Subjt:  MKQSWLICLVLISMLVAGQEVAANIT---YLKLVDCNQPNPPPSCSSPNGEGSTPVSVNAYTRGCSAINRCR

AT3G25170.1 ralf-like 266.3e-0537.5Show/hide
Query:  QSWLICLVLI--SMLVAGQEVAANITYLK---LVDCNQPNPPPSCSSPNGEGSTPVSVNAYTRGCSAINRCR
        ++W+I L++I  +++V   E      YL    L  C  PNPP  C   N      V V+ Y+RGCS I RCR
Subjt:  QSWLICLVLI--SMLVAGQEVAANITYLK---LVDCNQPNPPPSCSSPNGEGSTPVSVNAYTRGCSAINRCR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGCAATCATGGCTCATATGTTTAGTTCTTATTAGCATGTTGGTGGCAGGACAAGAAGTAGCAGCGAACATAACTTATCTTAAACTAGTGGACTGCAACCAACCAAA
CCCACCACCAAGTTGTTCTTCACCGAATGGAGAAGGTTCTACACCTGTTTCTGTTAATGCCTATACTCGAGGTTGCTCTGCCATCAACCGTTGTCGTGGAGGATGA
mRNA sequenceShow/hide mRNA sequence
ATGAAGCAATCATGGCTCATATGTTTAGTTCTTATTAGCATGTTGGTGGCAGGACAAGAAGTAGCAGCGAACATAACTTATCTTAAACTAGTGGACTGCAACCAACCAAA
CCCACCACCAAGTTGTTCTTCACCGAATGGAGAAGGTTCTACACCTGTTTCTGTTAATGCCTATACTCGAGGTTGCTCTGCCATCAACCGTTGTCGTGGAGGATGA
Protein sequenceShow/hide protein sequence
MKQSWLICLVLISMLVAGQEVAANITYLKLVDCNQPNPPPSCSSPNGEGSTPVSVNAYTRGCSAINRCRGG