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Tan0017266 (gene) of Snake gourd v1 genome

Gene IDTan0017266
OrganismTrichosanthes anguina (Snake gourd v1)
Descriptionvacuolar protein sorting-associated protein 55 homolog
Genome locationLG01:24651346..24653521
RNA-Seq ExpressionTan0017266
SyntenyTan0017266
Gene Ontology termsGO:0005975 - carbohydrate metabolic process (biological process)
GO:0006048 - UDP-N-acetylglucosamine biosynthetic process (biological process)
GO:0032511 - late endosome to vacuole transport via multivesicular body sorting pathway (biological process)
GO:0005768 - endosome (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0004610 - phosphoacetylglucosamine mutase activity (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR007262 - Vps55/LEPROT


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004150170.1 vacuolar protein sorting-associated protein 55 homolog [Cucumis sativus]7.2e-5483.33Show/hide
Query:  MADLPRSLQACLSMGKVAFLAILVSGGIVMQILACALYNNWWPMLSVIMYVLLPMPLLFFAGV----------RYWINATKFLTGASTIGSIAIPIILKH
        MADLP SLQACL MGKVAFLAILVSGGIVMQILACALYNNWWPMLSVIMYVLLPMPLLFFAG             WINATKFLTGAST+GSIAIP+ILKH
Subjt:  MADLPRSLQACLSMGKVAFLAILVSGGIVMQILACALYNNWWPMLSVIMYVLLPMPLLFFAGV----------RYWINATKFLTGASTIGSIAIPIILKH

Query:  AGIIGWGALAMDLSSFVVFVIAILCFLWMNEDDDYTMF
        AGIIGWGA+AMDLSSFVVFV+AILCF+ M+EDDDY+MF
Subjt:  AGIIGWGALAMDLSSFVVFVIAILCFLWMNEDDDYTMF

XP_022155500.1 vacuolar protein sorting-associated protein 55 homolog [Momordica charantia]6.6e-5587.05Show/hide
Query:  MADLPRSLQACLSMGKVAFLAILVSGGIVMQILACALYNNWWPMLSVIMYVLLPMPLLFFAGV----------RYWINATKFLTGASTIGSIAIPIILKH
        MADLP SLQAC SMGKVAFLAILVSGGIVMQILACALYNNWWPMLSVIMYVLLPMPLLFF G             WINATKFLTGASTIGSIAIPIILKH
Subjt:  MADLPRSLQACLSMGKVAFLAILVSGGIVMQILACALYNNWWPMLSVIMYVLLPMPLLFFAGV----------RYWINATKFLTGASTIGSIAIPIILKH

Query:  AGIIGWGALAMDLSSFVVFVIAILCFLWMNEDDD-YTMF
        AGIIGWGALAMDLSSF+VFVIAILCFLWMNEDDD YTMF
Subjt:  AGIIGWGALAMDLSSFVVFVIAILCFLWMNEDDD-YTMF

XP_022923424.1 vacuolar protein sorting-associated protein 55 homolog [Cucurbita moschata]7.2e-5485.51Show/hide
Query:  MADLPRSLQACLSMGKVAFLAILVSGGIVMQILACALYNNWWPMLSVIMYVLLPMPLLFFAG----------VRYWINATKFLTGASTIGSIAIPIILKH
        MADLP SLQACLSMGKVAFLAILVSGGIV+QILACALYNNWWPMLSVIMYVLLPMPLLFFAG             WINATKFLTGASTIGSIAIPIILKH
Subjt:  MADLPRSLQACLSMGKVAFLAILVSGGIVMQILACALYNNWWPMLSVIMYVLLPMPLLFFAG----------VRYWINATKFLTGASTIGSIAIPIILKH

Query:  AGIIGWGALAMDLSSFVVFVIAILCFLWMNEDDDYTMF
        AGIIGWGA+AMDLSSFVVFVIAILCF+ M+EDD YTMF
Subjt:  AGIIGWGALAMDLSSFVVFVIAILCFLWMNEDDDYTMF

XP_022965211.1 vacuolar protein sorting-associated protein 55 homolog [Cucurbita maxima]4.2e-5485.51Show/hide
Query:  MADLPRSLQACLSMGKVAFLAILVSGGIVMQILACALYNNWWPMLSVIMYVLLPMPLLFFAG----------VRYWINATKFLTGASTIGSIAIPIILKH
        MADLP SLQACLSMGKVAFLAILVSGGIV+QILACALYNNWWPMLSVIMYVLLPMPLLFFAG             WINATKFLTGASTIGSIAIPIILKH
Subjt:  MADLPRSLQACLSMGKVAFLAILVSGGIVMQILACALYNNWWPMLSVIMYVLLPMPLLFFAG----------VRYWINATKFLTGASTIGSIAIPIILKH

Query:  AGIIGWGALAMDLSSFVVFVIAILCFLWMNEDDDYTMF
        AGIIGWGA+AMDLSSFVVFVIAILCF+ M+EDD YTMF
Subjt:  AGIIGWGALAMDLSSFVVFVIAILCFLWMNEDDDYTMF

XP_038906097.1 vacuolar protein sorting-associated protein 55 homolog [Benincasa hispida]3.8e-5586.23Show/hide
Query:  MADLPRSLQACLSMGKVAFLAILVSGGIVMQILACALYNNWWPMLSVIMYVLLPMPLLFFAGV----------RYWINATKFLTGASTIGSIAIPIILKH
        MADLP SLQACLSMGKVAFLAILVSGGIVMQILACALYNNWWPMLSVIMYVLLPMPLLFFAG             WINATKFLTGAST+GSIAIPIILKH
Subjt:  MADLPRSLQACLSMGKVAFLAILVSGGIVMQILACALYNNWWPMLSVIMYVLLPMPLLFFAGV----------RYWINATKFLTGASTIGSIAIPIILKH

Query:  AGIIGWGALAMDLSSFVVFVIAILCFLWMNEDDDYTMF
        AGIIGWGA+AMDLSSFVVFVIAILCF+ M+EDDDYTMF
Subjt:  AGIIGWGALAMDLSSFVVFVIAILCFLWMNEDDDYTMF

TrEMBL top hitse value%identityAlignment
A0A0A0L5B3 Uncharacterized protein3.5e-5483.33Show/hide
Query:  MADLPRSLQACLSMGKVAFLAILVSGGIVMQILACALYNNWWPMLSVIMYVLLPMPLLFFAGV----------RYWINATKFLTGASTIGSIAIPIILKH
        MADLP SLQACL MGKVAFLAILVSGGIVMQILACALYNNWWPMLSVIMYVLLPMPLLFFAG             WINATKFLTGAST+GSIAIP+ILKH
Subjt:  MADLPRSLQACLSMGKVAFLAILVSGGIVMQILACALYNNWWPMLSVIMYVLLPMPLLFFAGV----------RYWINATKFLTGASTIGSIAIPIILKH

Query:  AGIIGWGALAMDLSSFVVFVIAILCFLWMNEDDDYTMF
        AGIIGWGA+AMDLSSFVVFV+AILCF+ M+EDDDY+MF
Subjt:  AGIIGWGALAMDLSSFVVFVIAILCFLWMNEDDDYTMF

A0A1S3BJT4 vacuolar protein sorting-associated protein 55 homolog4.6e-5483.33Show/hide
Query:  MADLPRSLQACLSMGKVAFLAILVSGGIVMQILACALYNNWWPMLSVIMYVLLPMPLLFFAGV----------RYWINATKFLTGASTIGSIAIPIILKH
        MADLP SLQACL MGKVAFLAILVSGGIVMQILACALYNNWWPMLSVIMYVLLPMPLLFFAG             WINATKFLTGAST+GSIAIP+ILKH
Subjt:  MADLPRSLQACLSMGKVAFLAILVSGGIVMQILACALYNNWWPMLSVIMYVLLPMPLLFFAGV----------RYWINATKFLTGASTIGSIAIPIILKH

Query:  AGIIGWGALAMDLSSFVVFVIAILCFLWMNEDDDYTMF
        AGIIGWGA+AMDLSSFVVFV+AILCF+ M+EDDDY+MF
Subjt:  AGIIGWGALAMDLSSFVVFVIAILCFLWMNEDDDYTMF

A0A6J1DML0 vacuolar protein sorting-associated protein 55 homolog3.2e-5587.05Show/hide
Query:  MADLPRSLQACLSMGKVAFLAILVSGGIVMQILACALYNNWWPMLSVIMYVLLPMPLLFFAGV----------RYWINATKFLTGASTIGSIAIPIILKH
        MADLP SLQAC SMGKVAFLAILVSGGIVMQILACALYNNWWPMLSVIMYVLLPMPLLFF G             WINATKFLTGASTIGSIAIPIILKH
Subjt:  MADLPRSLQACLSMGKVAFLAILVSGGIVMQILACALYNNWWPMLSVIMYVLLPMPLLFFAGV----------RYWINATKFLTGASTIGSIAIPIILKH

Query:  AGIIGWGALAMDLSSFVVFVIAILCFLWMNEDDD-YTMF
        AGIIGWGALAMDLSSF+VFVIAILCFLWMNEDDD YTMF
Subjt:  AGIIGWGALAMDLSSFVVFVIAILCFLWMNEDDD-YTMF

A0A6J1E6D1 vacuolar protein sorting-associated protein 55 homolog3.5e-5485.51Show/hide
Query:  MADLPRSLQACLSMGKVAFLAILVSGGIVMQILACALYNNWWPMLSVIMYVLLPMPLLFFAG----------VRYWINATKFLTGASTIGSIAIPIILKH
        MADLP SLQACLSMGKVAFLAILVSGGIV+QILACALYNNWWPMLSVIMYVLLPMPLLFFAG             WINATKFLTGASTIGSIAIPIILKH
Subjt:  MADLPRSLQACLSMGKVAFLAILVSGGIVMQILACALYNNWWPMLSVIMYVLLPMPLLFFAG----------VRYWINATKFLTGASTIGSIAIPIILKH

Query:  AGIIGWGALAMDLSSFVVFVIAILCFLWMNEDDDYTMF
        AGIIGWGA+AMDLSSFVVFVIAILCF+ M+EDD YTMF
Subjt:  AGIIGWGALAMDLSSFVVFVIAILCFLWMNEDDDYTMF

A0A6J1HL31 vacuolar protein sorting-associated protein 55 homolog2.1e-5485.51Show/hide
Query:  MADLPRSLQACLSMGKVAFLAILVSGGIVMQILACALYNNWWPMLSVIMYVLLPMPLLFFAG----------VRYWINATKFLTGASTIGSIAIPIILKH
        MADLP SLQACLSMGKVAFLAILVSGGIV+QILACALYNNWWPMLSVIMYVLLPMPLLFFAG             WINATKFLTGASTIGSIAIPIILKH
Subjt:  MADLPRSLQACLSMGKVAFLAILVSGGIVMQILACALYNNWWPMLSVIMYVLLPMPLLFFAG----------VRYWINATKFLTGASTIGSIAIPIILKH

Query:  AGIIGWGALAMDLSSFVVFVIAILCFLWMNEDDDYTMF
        AGIIGWGA+AMDLSSFVVFVIAILCF+ M+EDD YTMF
Subjt:  AGIIGWGALAMDLSSFVVFVIAILCFLWMNEDDDYTMF

SwissProt top hitse value%identityAlignment
O89013 Leptin receptor gene-related protein4.9e-0529.6Show/hide
Query:  GKVAFLAILVSG--GIVMQILACAL--YNNWWPMLSVIMYVLLPMPLLFFAGVRYWINATK--------FLTGASTIGSIAIPIILKHAGIIGWGALAMD
        G  A +A+  SG  G+   +L CAL  Y  +WP+  +I YV+ P+P      V Y  +AT         F T    + +  +P++L    +I WGA  + 
Subjt:  GKVAFLAILVSG--GIVMQILACAL--YNNWWPMLSVIMYVLLPMPLLFFAGVRYWINATK--------FLTGASTIGSIAIPIILKHAGIIGWGALAMD

Query:  LS-SFVVFVIAILCFLWMNEDDDYT
        L+ + V+F+     FL     DD++
Subjt:  LS-SFVVFVIAILCFLWMNEDDDYT

P47111 Vacuolar protein sorting-associated protein 554.5e-0627.78Show/hide
Query:  KVAFLAILVSGGIVMQILACALYNNWWPMLSVIMYVLLPMP-LLFFAGVRYWI------------NATKFLTGASTIGSIAIPIILKHAGIIGWGALAMD
        K+  L+  ++ G ++ IL+CAL++N++P+  +++++L P+P  +F AG +Y              +   FLTG      IA+P++  H  +IG  +  M 
Subjt:  KVAFLAILVSGGIVMQILACALYNNWWPMLSVIMYVLLPMP-LLFFAGVRYWI------------NATKFLTGASTIGSIAIPIILKHAGIIGWGALAMD

Query:  LSSFVVFVIAILCFLW-----MNEDD
        +   ++   +I+ F W      NEDD
Subjt:  LSSFVVFVIAILCFLW-----MNEDD

Q18319 Vacuolar protein sorting-associated protein 55 homolog1.8e-0733.33Show/hide
Query:  MGKVAFLAILVSGGIV---MQILACAL--YNNWWPMLSVIMYVLLPMPLLF-------FAGVRYWINATKFLTGASTIGSIAIPIILKHAGIIGWGALAM
        MG V  +A L   G+V     +L CAL  Y  W PM  +  YVL P+PLL          G    I    F+T    I + A+PI+L HAG I   A  +
Subjt:  MGKVAFLAILVSGGIV---MQILACAL--YNNWWPMLSVIMYVLLPMPLLF-------FAGVRYWINATKFLTGASTIGSIAIPIILKHAGIIGWGALAM

Query:  DLSSFVVFVIAILCFLWMNEDDD
          +  V+    I+ + +++ DDD
Subjt:  DLSSFVVFVIAILCFLWMNEDDD

Q9AST6 Vacuolar protein sorting-associated protein 55 homolog2.7e-4367.91Show/hide
Query:  MADLPRSLQACLSMGKVAFLAILVSGGIVMQILACALYNNWWPMLSVIMYVLLPMPLLFFAGV----------RYWINATKFLTGASTIGSIAIPIILKH
        MAD+P  L+ CL MGK+AFLAILVS GIV+QILACAL+NNWWPMLSVIMYVLLPMPLLFF G             WINA KFLTGAS +GS+AIP ILKH
Subjt:  MADLPRSLQACLSMGKVAFLAILVSGGIVMQILACALYNNWWPMLSVIMYVLLPMPLLFFAGV----------RYWINATKFLTGASTIGSIAIPIILKH

Query:  AGIIGWGALAMDLSSFVVFVIAILCFLWMNEDDD
        AG+IGWGALA+DLSS+VVF++AIL ++ + +  D
Subjt:  AGIIGWGALAMDLSSFVVFVIAILCFLWMNEDDD

Q9UUH1 Vacuolar protein sorting-associated protein 552.2e-0526.83Show/hide
Query:  KVAFLAILVSGGIVMQILACALYNNWWPMLSVIMYVLLPMPLLFFAGV-----------RYWINATKFLTGASTIGSIAIPIILKHAGIIGWGALAMDL-
        K+  L+ +++ G ++ IL+CAL+ NW+P+L VI ++L P+P L                R  ++  +F  GA+     A+PI+  + G+IG  A  M   
Subjt:  KVAFLAILVSGGIVMQILACALYNNWWPMLSVIMYVLLPMPLLFFAGV-----------RYWINATKFLTGASTIGSIAIPIILKHAGIIGWGALAMDL-

Query:  -SSFVVFVIAILCFLWMNEDDDY
          S +  VI +    ++  ++++
Subjt:  -SSFVVFVIAILCFLWMNEDDDY

Arabidopsis top hitse value%identityAlignment
AT1G32410.1 Vacuolar protein sorting 55 (VPS55) family protein1.9e-4467.91Show/hide
Query:  MADLPRSLQACLSMGKVAFLAILVSGGIVMQILACALYNNWWPMLSVIMYVLLPMPLLFFAGV----------RYWINATKFLTGASTIGSIAIPIILKH
        MAD+P  L+ CL MGK+AFLAILVS GIV+QILACAL+NNWWPMLSVIMYVLLPMPLLFF G             WINA KFLTGAS +GS+AIP ILKH
Subjt:  MADLPRSLQACLSMGKVAFLAILVSGGIVMQILACALYNNWWPMLSVIMYVLLPMPLLFFAGV----------RYWINATKFLTGASTIGSIAIPIILKH

Query:  AGIIGWGALAMDLSSFVVFVIAILCFLWMNEDDD
        AG+IGWGALA+DLSS+VVF++AIL ++ + +  D
Subjt:  AGIIGWGALAMDLSSFVVFVIAILCFLWMNEDDD

AT1G32410.2 Vacuolar protein sorting 55 (VPS55) family protein1.9e-4467.91Show/hide
Query:  MADLPRSLQACLSMGKVAFLAILVSGGIVMQILACALYNNWWPMLSVIMYVLLPMPLLFFAGV----------RYWINATKFLTGASTIGSIAIPIILKH
        MAD+P  L+ CL MGK+AFLAILVS GIV+QILACAL+NNWWPMLSVIMYVLLPMPLLFF G             WINA KFLTGAS +GS+AIP ILKH
Subjt:  MADLPRSLQACLSMGKVAFLAILVSGGIVMQILACALYNNWWPMLSVIMYVLLPMPLLFFAGV----------RYWINATKFLTGASTIGSIAIPIILKH

Query:  AGIIGWGALAMDLSSFVVFVIAILCFLWMNEDDD
        AG+IGWGALA+DLSS+VVF++AIL ++ + +  D
Subjt:  AGIIGWGALAMDLSSFVVFVIAILCFLWMNEDDD

AT1G32410.3 Vacuolar protein sorting 55 (VPS55) family protein1.9e-4467.91Show/hide
Query:  MADLPRSLQACLSMGKVAFLAILVSGGIVMQILACALYNNWWPMLSVIMYVLLPMPLLFFAGV----------RYWINATKFLTGASTIGSIAIPIILKH
        MAD+P  L+ CL MGK+AFLAILVS GIV+QILACAL+NNWWPMLSVIMYVLLPMPLLFF G             WINA KFLTGAS +GS+AIP ILKH
Subjt:  MADLPRSLQACLSMGKVAFLAILVSGGIVMQILACALYNNWWPMLSVIMYVLLPMPLLFFAGV----------RYWINATKFLTGASTIGSIAIPIILKH

Query:  AGIIGWGALAMDLSSFVVFVIAILCFLWMNEDDD
        AG+IGWGALA+DLSS+VVF++AIL ++ + +  D
Subjt:  AGIIGWGALAMDLSSFVVFVIAILCFLWMNEDDD

AT1G32410.4 Vacuolar protein sorting 55 (VPS55) family protein1.9e-4467.91Show/hide
Query:  MADLPRSLQACLSMGKVAFLAILVSGGIVMQILACALYNNWWPMLSVIMYVLLPMPLLFFAGV----------RYWINATKFLTGASTIGSIAIPIILKH
        MAD+P  L+ CL MGK+AFLAILVS GIV+QILACAL+NNWWPMLSVIMYVLLPMPLLFF G             WINA KFLTGAS +GS+AIP ILKH
Subjt:  MADLPRSLQACLSMGKVAFLAILVSGGIVMQILACALYNNWWPMLSVIMYVLLPMPLLFFAGV----------RYWINATKFLTGASTIGSIAIPIILKH

Query:  AGIIGWGALAMDLSSFVVFVIAILCFLWMNEDDD
        AG+IGWGALA+DLSS+VVF++AIL ++ + +  D
Subjt:  AGIIGWGALAMDLSSFVVFVIAILCFLWMNEDDD

AT1G32410.5 Vacuolar protein sorting 55 (VPS55) family protein1.9e-4467.91Show/hide
Query:  MADLPRSLQACLSMGKVAFLAILVSGGIVMQILACALYNNWWPMLSVIMYVLLPMPLLFFAGV----------RYWINATKFLTGASTIGSIAIPIILKH
        MAD+P  L+ CL MGK+AFLAILVS GIV+QILACAL+NNWWPMLSVIMYVLLPMPLLFF G             WINA KFLTGAS +GS+AIP ILKH
Subjt:  MADLPRSLQACLSMGKVAFLAILVSGGIVMQILACALYNNWWPMLSVIMYVLLPMPLLFFAGV----------RYWINATKFLTGASTIGSIAIPIILKH

Query:  AGIIGWGALAMDLSSFVVFVIAILCFLWMNEDDD
        AG+IGWGALA+DLSS+VVF++AIL ++ + +  D
Subjt:  AGIIGWGALAMDLSSFVVFVIAILCFLWMNEDDD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAGACTTACCACGTTCTTTGCAAGCCTGCTTGAGTATGGGGAAGGTGGCATTCTTAGCAATTTTGGTTTCTGGAGGAATAGTAATGCAAATATTGGCATGCGCCTT
GTACAATAATTGGTGGCCGATGCTAAGTGTGATAATGTATGTGCTTCTCCCTATGCCTTTATTATTCTTTGCCGGGGTCAGATACTGGATCAATGCAACGAAATTCTTGA
CTGGAGCTTCGACTATAGGAAGCATTGCCATCCCCATCATCCTGAAGCATGCCGGGATCATCGGCTGGGGGGCACTGGCAATGGACCTCTCGTCATTTGTAGTATTCGTG
ATTGCCATTTTGTGTTTCTTGTGGATGAACGAAGACGATGACTACACCATGTTCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCAGACTTACCACGTTCTTTGCAAGCCTGCTTGAGTATGGGGAAGGTGGCATTCTTAGCAATTTTGGTTTCTGGAGGAATAGTAATGCAAATATTGGCATGCGCCTT
GTACAATAATTGGTGGCCGATGCTAAGTGTGATAATGTATGTGCTTCTCCCTATGCCTTTATTATTCTTTGCCGGGGTCAGATACTGGATCAATGCAACGAAATTCTTGA
CTGGAGCTTCGACTATAGGAAGCATTGCCATCCCCATCATCCTGAAGCATGCCGGGATCATCGGCTGGGGGGCACTGGCAATGGACCTCTCGTCATTTGTAGTATTCGTG
ATTGCCATTTTGTGTTTCTTGTGGATGAACGAAGACGATGACTACACCATGTTCTGA
Protein sequenceShow/hide protein sequence
MADLPRSLQACLSMGKVAFLAILVSGGIVMQILACALYNNWWPMLSVIMYVLLPMPLLFFAGVRYWINATKFLTGASTIGSIAIPIILKHAGIIGWGALAMDLSSFVVFV
IAILCFLWMNEDDDYTMF