; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0017290 (gene) of Snake gourd v1 genome

Gene IDTan0017290
OrganismTrichosanthes anguina (Snake gourd v1)
Description30S ribosomal protein S21, chloroplastic-like
Genome locationLG05:81372829..81374812
RNA-Seq ExpressionTan0017290
SyntenyTan0017290
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0005840 - ribosome (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR001911 - Ribosomal protein S21
IPR038380 - Ribosomal protein S21 superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004152510.2 30S ribosomal protein S21, chloroplastic [Cucumis sativus]4.8e-5375.15Show/hide
Query:  MAAAATSSLTKFFSFLSISKSSSVHRESVSLNFQSLSKSKPARLAAARGSVASTSPDSPEPTAGFLGIRNYNVLITVDDNESEEQLVGRFRRQVLRAGIL
        MAAAATSS+T FFSFLSISKSS +H  SVS+N QSL  SK  RL A+RG+VAS+   S EP    L I NYN+LITV +NESE+Q+V RFRRQVLRAGIL
Subjt:  MAAAATSSLTKFFSFLSISKSSSVHRESVSLNFQSLSKSKPARLAAARGSVASTSPDSPEPTAGFLGIRNYNVLITVDDNESEEQLVGRFRRQVLRAGIL

Query:  QECKRRRFFENSQAKRKRKAREAAKRNRKRWFRRPQSRAEQQPKQETPKRKNRDEEDDNWDFYKVDLPY
        QECKRRRFFENSQAKRKRKAREAAKRNRKR FRRPQS   +QP Q+TP+ KNRDEEDDNWDFY+VDLPY
Subjt:  QECKRRRFFENSQAKRKRKAREAAKRNRKRWFRRPQSRAEQQPKQETPKRKNRDEEDDNWDFYKVDLPY

XP_008439325.1 PREDICTED: uncharacterized protein LOC103484145 [Cucumis melo]4.3e-5474.85Show/hide
Query:  MAAAATSSLTKFFSFLSISKSSSVHRESVSLNFQSLSKSKPARLAAARGSVASTSPDSPEPTAGFLGIRNYNVLITVDDNESEEQLVGRFRRQVLRAGIL
        MAAAATSS+T FFSFLSISKSS +H  SVS+NFQSL KSK  RL A+RG+VAS+   S EP      I NYNVLITV +NESE+Q+V RFR QVLRAGIL
Subjt:  MAAAATSSLTKFFSFLSISKSSSVHRESVSLNFQSLSKSKPARLAAARGSVASTSPDSPEPTAGFLGIRNYNVLITVDDNESEEQLVGRFRRQVLRAGIL

Query:  QECKRRRFFENSQAKRKRKAREAAKRNRKRWFRRPQSRAEQQPKQETPKRKNRDEEDDNWDFYKVDLPYCS
        QECKRRRFFENSQAKRKRKAREAAKRNRKR FRRPQS  E+QP ++TP+ KN+DEEDDNWDFY+VDLPY S
Subjt:  QECKRRRFFENSQAKRKRKAREAAKRNRKRWFRRPQSRAEQQPKQETPKRKNRDEEDDNWDFYKVDLPYCS

XP_022994169.1 30S ribosomal protein S21, chloroplastic-like [Cucurbita maxima]1.7e-5374.4Show/hide
Query:  AATSSLTKFFSFLSISKSSSVHRESVSLNFQSLSKSKPARLAAARGSVASTSPDSPEPTAGFLGIRNYNVLITVDDNESEEQLVGRFRRQVLRAGILQEC
        AAT+SLT+FFSFLSISK S+ HRESVSLNFQSL+K+K ARLAAAR + +S +  SPE T+  L +RNYNVLITVD+N+ EE+LV +FRRQVLRAGILQEC
Subjt:  AATSSLTKFFSFLSISKSSSVHRESVSLNFQSLSKSKPARLAAARGSVASTSPDSPEPTAGFLGIRNYNVLITVDDNESEEQLVGRFRRQVLRAGILQEC

Query:  KRRRFFENSQAKRKRKAREAAKRNRKRWFRRPQSRAEQQPKQETPKRKNRDEEDDNWDFYKVDLPYCS
        KRRRFFENSQAKRKRKARE+AKRNRKR   +P+SRAE+Q KQET +RK+ +EE+DNWDFY+VDLPYCS
Subjt:  KRRRFFENSQAKRKRKAREAAKRNRKRWFRRPQSRAEQQPKQETPKRKNRDEEDDNWDFYKVDLPYCS

XP_023542788.1 30S ribosomal protein S21, chloroplastic-like [Cucurbita pepo subsp. pepo]3.1e-5273.81Show/hide
Query:  AATSSLTKFFSFLSISKSSSVHRESVSLNFQSLSKSKPARLAAARGSVASTSPDSPEPTAGFLGIRNYNVLITVDDNESEEQLVGRFRRQVLRAGILQEC
        AAT+SLT+FFSFLSISK S+ H ESVSLNFQSL+K K ARLAAAR + +S +  SPE T+  L +RNYNVLITVD+N+ EE+LV +FRRQVLRAGILQEC
Subjt:  AATSSLTKFFSFLSISKSSSVHRESVSLNFQSLSKSKPARLAAARGSVASTSPDSPEPTAGFLGIRNYNVLITVDDNESEEQLVGRFRRQVLRAGILQEC

Query:  KRRRFFENSQAKRKRKAREAAKRNRKRWFRRPQSRAEQQPKQETPKRKNRDEEDDNWDFYKVDLPYCS
        KRRRFFENSQAKRKRKARE+AKRNRKR   +P+SRAE+Q KQET +RK+ DE DDNW+FY+VDLPYCS
Subjt:  KRRRFFENSQAKRKRKAREAAKRNRKRWFRRPQSRAEQQPKQETPKRKNRDEEDDNWDFYKVDLPYCS

XP_038894121.1 30S ribosomal protein S21, chloroplastic-like [Benincasa hispida]2.5e-6281.29Show/hide
Query:  MAAAATSSLTKFFSFLSISKSSSVHRESVSLNFQSLSKSKPARLAAARGSVASTSPDSPEPTAGFLGIRNYNVLITVDDNESEEQLVGRFRRQVLRAGIL
        MAAAATSSLTKFFS LSISKSS +H  SVS+N QSL KSKPARL A RGSV   +P S EP   F G+R YNVLITV +NESE+QLV RFRRQVLRAGIL
Subjt:  MAAAATSSLTKFFSFLSISKSSSVHRESVSLNFQSLSKSKPARLAAARGSVASTSPDSPEPTAGFLGIRNYNVLITVDDNESEEQLVGRFRRQVLRAGIL

Query:  QECKRRRFFENSQAKRKRKAREAAKRNRKRWFRRPQSRAEQQPKQETPKRKNRDEEDDNWDFYKVDLPYCS
        QECKRRRFFENSQAKRKRKAREAAKRNRKRWFRRPQSRAE+QP ++TP+RKNRDEEDDNWDFY+VDLPYCS
Subjt:  QECKRRRFFENSQAKRKRKAREAAKRNRKRWFRRPQSRAEQQPKQETPKRKNRDEEDDNWDFYKVDLPYCS

TrEMBL top hitse value%identityAlignment
A0A0A0LWJ6 Uncharacterized protein2.3e-5375.15Show/hide
Query:  MAAAATSSLTKFFSFLSISKSSSVHRESVSLNFQSLSKSKPARLAAARGSVASTSPDSPEPTAGFLGIRNYNVLITVDDNESEEQLVGRFRRQVLRAGIL
        MAAAATSS+T FFSFLSISKSS +H  SVS+N QSL  SK  RL A+RG+VAS+   S EP    L I NYN+LITV +NESE+Q+V RFRRQVLRAGIL
Subjt:  MAAAATSSLTKFFSFLSISKSSSVHRESVSLNFQSLSKSKPARLAAARGSVASTSPDSPEPTAGFLGIRNYNVLITVDDNESEEQLVGRFRRQVLRAGIL

Query:  QECKRRRFFENSQAKRKRKAREAAKRNRKRWFRRPQSRAEQQPKQETPKRKNRDEEDDNWDFYKVDLPY
        QECKRRRFFENSQAKRKRKAREAAKRNRKR FRRPQS   +QP Q+TP+ KNRDEEDDNWDFY+VDLPY
Subjt:  QECKRRRFFENSQAKRKRKAREAAKRNRKRWFRRPQSRAEQQPKQETPKRKNRDEEDDNWDFYKVDLPY

A0A1S3AZ70 uncharacterized protein LOC1034841452.1e-5474.85Show/hide
Query:  MAAAATSSLTKFFSFLSISKSSSVHRESVSLNFQSLSKSKPARLAAARGSVASTSPDSPEPTAGFLGIRNYNVLITVDDNESEEQLVGRFRRQVLRAGIL
        MAAAATSS+T FFSFLSISKSS +H  SVS+NFQSL KSK  RL A+RG+VAS+   S EP      I NYNVLITV +NESE+Q+V RFR QVLRAGIL
Subjt:  MAAAATSSLTKFFSFLSISKSSSVHRESVSLNFQSLSKSKPARLAAARGSVASTSPDSPEPTAGFLGIRNYNVLITVDDNESEEQLVGRFRRQVLRAGIL

Query:  QECKRRRFFENSQAKRKRKAREAAKRNRKRWFRRPQSRAEQQPKQETPKRKNRDEEDDNWDFYKVDLPYCS
        QECKRRRFFENSQAKRKRKAREAAKRNRKR FRRPQS  E+QP ++TP+ KN+DEEDDNWDFY+VDLPY S
Subjt:  QECKRRRFFENSQAKRKRKAREAAKRNRKRWFRRPQSRAEQQPKQETPKRKNRDEEDDNWDFYKVDLPYCS

A0A6J1GTI1 30S ribosomal protein S21, chloroplastic-like1.7e-5172.62Show/hide
Query:  AATSSLTKFFSFLSISKSSSVHRESVSLNFQSLSKSKPARLAAARGSVASTSPDSPEPTAGFLGIRNYNVLITVDDNESEEQLVGRFRRQVLRAGILQEC
        AAT+SLT+FFSFLSISK S+ HRESVSLNFQS +K   ARLAAAR + +S +  SPE T+  L +RNYNVLITVD+N+ EE+LV +FRRQVLRAGILQEC
Subjt:  AATSSLTKFFSFLSISKSSSVHRESVSLNFQSLSKSKPARLAAARGSVASTSPDSPEPTAGFLGIRNYNVLITVDDNESEEQLVGRFRRQVLRAGILQEC

Query:  KRRRFFENSQAKRKRKAREAAKRNRKRWFRRPQSRAEQQPKQETPKRKNRDEEDDNWDFYKVDLPYCS
        KRRRFFENSQAKRKRKARE+AKRNRKR   +P+SRAE+Q KQE  +RK+ DE DDNW+FY+VDLPYCS
Subjt:  KRRRFFENSQAKRKRKAREAAKRNRKRWFRRPQSRAEQQPKQETPKRKNRDEEDDNWDFYKVDLPYCS

A0A6J1K257 30S ribosomal protein S21, chloroplastic-like8.0e-5474.4Show/hide
Query:  AATSSLTKFFSFLSISKSSSVHRESVSLNFQSLSKSKPARLAAARGSVASTSPDSPEPTAGFLGIRNYNVLITVDDNESEEQLVGRFRRQVLRAGILQEC
        AAT+SLT+FFSFLSISK S+ HRESVSLNFQSL+K+K ARLAAAR + +S +  SPE T+  L +RNYNVLITVD+N+ EE+LV +FRRQVLRAGILQEC
Subjt:  AATSSLTKFFSFLSISKSSSVHRESVSLNFQSLSKSKPARLAAARGSVASTSPDSPEPTAGFLGIRNYNVLITVDDNESEEQLVGRFRRQVLRAGILQEC

Query:  KRRRFFENSQAKRKRKAREAAKRNRKRWFRRPQSRAEQQPKQETPKRKNRDEEDDNWDFYKVDLPYCS
        KRRRFFENSQAKRKRKARE+AKRNRKR   +P+SRAE+Q KQET +RK+ +EE+DNWDFY+VDLPYCS
Subjt:  KRRRFFENSQAKRKRKAREAAKRNRKRWFRRPQSRAEQQPKQETPKRKNRDEEDDNWDFYKVDLPYCS

E5GBW8 Structural constituent of ribosome2.1e-5474.85Show/hide
Query:  MAAAATSSLTKFFSFLSISKSSSVHRESVSLNFQSLSKSKPARLAAARGSVASTSPDSPEPTAGFLGIRNYNVLITVDDNESEEQLVGRFRRQVLRAGIL
        MAAAATSS+T FFSFLSISKSS +H  SVS+NFQSL KSK  RL A+RG+VAS+   S EP      I NYNVLITV +NESE+Q+V RFR QVLRAGIL
Subjt:  MAAAATSSLTKFFSFLSISKSSSVHRESVSLNFQSLSKSKPARLAAARGSVASTSPDSPEPTAGFLGIRNYNVLITVDDNESEEQLVGRFRRQVLRAGIL

Query:  QECKRRRFFENSQAKRKRKAREAAKRNRKRWFRRPQSRAEQQPKQETPKRKNRDEEDDNWDFYKVDLPYCS
        QECKRRRFFENSQAKRKRKAREAAKRNRKR FRRPQS  E+QP ++TP+ KN+DEEDDNWDFY+VDLPY S
Subjt:  QECKRRRFFENSQAKRKRKAREAAKRNRKRWFRRPQSRAEQQPKQETPKRKNRDEEDDNWDFYKVDLPYCS

SwissProt top hitse value%identityAlignment
P82024 30S ribosomal protein S21, chloroplastic2.4e-1539.78Show/hide
Query:  AATSSLTKFFSFLSISKSS--------SVHRESVSLNFQSLSKSKPARLAAARGSVASTSPDSPEPTAGFLGIRN-------YNVLITVDDNESEEQLVG
        A+TSSL  F S L  S +S          +  S+S    S+S S      AA         D        L   N       YNV + VDDNE+EE+L+ 
Subjt:  AATSSLTKFFSFLSISKSS--------SVHRESVSLNFQSLSKSKPARLAAARGSVASTSPDSPEPTAGFLGIRN-------YNVLITVDDNESEEQLVG

Query:  RFRRQVLRAGILQECKRRRFFENSQAKRKRKAREAAKRNRKRWFRRPQSRAEQQPKQETPKRKNRDEEDDNWDFYKVDLPY
        RFRR+V+RAG++QECKRRR+FEN Q ++KRK REAAKRN +R  RR   R     K+E  K   ++++ DNWD  +   P+
Subjt:  RFRRQVLRAGILQECKRRRFFENSQAKRKRKAREAAKRNRKRWFRRPQSRAEQQPKQETPKRKNRDEEDDNWDFYKVDLPY

Q0SRF3 30S ribosomal protein S219.5e-0447.27Show/hide
Query:  ITVDDNESEEQLVGRFRRQVLRAGILQECKRRRFFENSQAKRKRKAREAAKRNRK
        I V +NES EQ + RF+RQ  RAG+L E ++R  +E    KRK+K+  A KR  K
Subjt:  ITVDDNESEEQLVGRFRRQVLRAGILQECKRRRFFENSQAKRKRKAREAAKRNRK

Q0TNT7 30S ribosomal protein S219.5e-0447.27Show/hide
Query:  ITVDDNESEEQLVGRFRRQVLRAGILQECKRRRFFENSQAKRKRKAREAAKRNRK
        I V +NES EQ + RF+RQ  RAG+L E ++R  +E    KRK+K+  A KR  K
Subjt:  ITVDDNESEEQLVGRFRRQVLRAGILQECKRRRFFENSQAKRKRKAREAAKRNRK

Q7NHA1 30S ribosomal protein S21 27.3e-0446.3Show/hide
Query:  ITVDDNESEEQLVGRFRRQVLRAGILQECKRRRFFENSQAKRKRKAREAAKRNR
        + + +NES E  + RF++++ +AGIL E KRR  +E   A+RKRKA  A KR R
Subjt:  ITVDDNESEEQLVGRFRRQVLRAGILQECKRRRFFENSQAKRKRKAREAAKRNR

Q8XIU0 30S ribosomal protein S219.5e-0447.27Show/hide
Query:  ITVDDNESEEQLVGRFRRQVLRAGILQECKRRRFFENSQAKRKRKAREAAKRNRK
        I V +NES EQ + RF+RQ  RAG+L E ++R  +E    KRK+K+  A KR  K
Subjt:  ITVDDNESEEQLVGRFRRQVLRAGILQECKRRRFFENSQAKRKRKAREAAKRNRK

Arabidopsis top hitse value%identityAlignment
AT3G27160.1 Ribosomal protein S21 family protein1.4e-2140.76Show/hide
Query:  AATSSLTKFFSFLSISKSSSVHRESVSLNFQS--LSKSKPARLAAARGSVASTSPDSPEPTAGFLGI--------------RNYNVLITVDDNESEEQLV
        AA+ SLT F SF+S  KS +      +L   S  +S+ +   LA    +V  TS  +   ++    +                YNV + V+DNESEE+LV
Subjt:  AATSSLTKFFSFLSISKSSSVHRESVSLNFQS--LSKSKPARLAAARGSVASTSPDSPEPTAGFLGI--------------RNYNVLITVDDNESEEQLV

Query:  GRFRRQVLRAGILQECKRRRFFENSQAKRKRKAREAAKRNRKRWFRRPQSRAEQQPKQE---TPKRKNRDEEDDNWDFYKVDLP
         RFRR+V+R G++QECKRRR+FEN Q ++KR+ R+AAKRN+K   RRPQ+R  Q+ ++E     K K +DEE+DNW+    D+P
Subjt:  GRFRRQVLRAGILQECKRRRFFENSQAKRKRKAREAAKRNRKRWFRRPQSRAEQQPKQE---TPKRKNRDEEDDNWDFYKVDLP

AT5G63300.1 Ribosomal protein S21 family protein4.4e-1243.14Show/hide
Query:  YNVLITVDDNESEEQLVGRFRRQVLRAGILQECKRRRFFENSQAKRKRKAREAAKRNRKRWFR-RPQSRAEQQPKQETPKRKNRDEEDDNWDF--YKVDL
        YNV +   D ESEEQLV  F+R   RAG+LQE +RRRFFE+S  K+ RK +EAAK+ RKR    +P+  +  + ++        DE+DD+W+     +++
Subjt:  YNVLITVDDNESEEQLVGRFRRQVLRAGILQECKRRRFFENSQAKRKRKAREAAKRNRKRWFR-RPQSRAEQQPKQETPKRKNRDEEDDNWDF--YKVDL

Query:  PY
        PY
Subjt:  PY

AT5G63300.2 Ribosomal protein S21 family protein6.3e-1160Show/hide
Query:  YNVLITVDDNESEEQLVGRFRRQVLRAGILQECKRRRFFENSQAKRKRKAREAAKRNRKR
        YNV +   D ESEEQLV  F+R   RAG+LQE +RRRFFE+S  K+ RK +EAAK+ RKR
Subjt:  YNVLITVDDNESEEQLVGRFRRQVLRAGILQECKRRRFFENSQAKRKRKAREAAKRNRKR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCGCCGCTGCAACTTCATCTCTCACGAAGTTCTTCTCCTTCCTCTCCATCTCGAAATCGTCATCAGTACACCGTGAGTCCGTCTCTTTAAACTTTCAGTCTCTTTC
GAAGTCTAAACCGGCTCGGTTGGCTGCCGCCAGGGGCTCTGTTGCGTCTACTTCCCCAGATTCCCCAGAACCTACTGCTGGCTTCTTAGGCATAAGGAATTACAATGTTC
TGATCACCGTGGACGATAACGAGTCTGAAGAGCAGCTGGTGGGTCGATTCAGGAGGCAGGTCTTGAGAGCTGGGATCTTGCAGGAGTGTAAGAGGAGAAGGTTTTTTGAA
AACAGCCAGGCGAAGAGAAAGAGGAAAGCTAGAGAAGCTGCTAAAAGGAATCGCAAGAGATGGTTTAGGAGGCCTCAATCAAGAGCTGAGCAGCAGCCAAAACAGGAAAC
CCCCAAGAGGAAGAATAGAGATGAGGAAGATGACAACTGGGATTTTTACAAAGTAGACCTTCCATACTGTTCATAG
mRNA sequenceShow/hide mRNA sequence
ATGGCCGCCGCTGCAACTTCATCTCTCACGAAGTTCTTCTCCTTCCTCTCCATCTCGAAATCGTCATCAGTACACCGTGAGTCCGTCTCTTTAAACTTTCAGTCTCTTTC
GAAGTCTAAACCGGCTCGGTTGGCTGCCGCCAGGGGCTCTGTTGCGTCTACTTCCCCAGATTCCCCAGAACCTACTGCTGGCTTCTTAGGCATAAGGAATTACAATGTTC
TGATCACCGTGGACGATAACGAGTCTGAAGAGCAGCTGGTGGGTCGATTCAGGAGGCAGGTCTTGAGAGCTGGGATCTTGCAGGAGTGTAAGAGGAGAAGGTTTTTTGAA
AACAGCCAGGCGAAGAGAAAGAGGAAAGCTAGAGAAGCTGCTAAAAGGAATCGCAAGAGATGGTTTAGGAGGCCTCAATCAAGAGCTGAGCAGCAGCCAAAACAGGAAAC
CCCCAAGAGGAAGAATAGAGATGAGGAAGATGACAACTGGGATTTTTACAAAGTAGACCTTCCATACTGTTCATAG
Protein sequenceShow/hide protein sequence
MAAAATSSLTKFFSFLSISKSSSVHRESVSLNFQSLSKSKPARLAAARGSVASTSPDSPEPTAGFLGIRNYNVLITVDDNESEEQLVGRFRRQVLRAGILQECKRRRFFE
NSQAKRKRKAREAAKRNRKRWFRRPQSRAEQQPKQETPKRKNRDEEDDNWDFYKVDLPYCS