; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0017309 (gene) of Snake gourd v1 genome

Gene IDTan0017309
OrganismTrichosanthes anguina (Snake gourd v1)
Descriptionlate embryogenesis abundant protein At5g17165-like
Genome locationLG07:4844293..4848092
RNA-Seq ExpressionTan0017309
SyntenyTan0017309
Gene Ontology termsNA
InterPro domainsIPR039291 - Late embryogenesis abundant protein At5g17165-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6605657.1 ATP-dependent DNA helicase SRS2-like protein, partial [Cucurbita argyrosperma subsp. sororia]2.6e-3862.96Show/hide
Query:  MAANSNYLVIVIARRLTGLGKPVLSLSWKNWTTPCSSQSPSLFRLRAGHWAAYEKNSEEEICPTVVPDHMIHPLSENYWSPHPQTGVFGPPTQHNNPLPN
        MAA SN L+I    RL     P+  L            SPSLF LRAGHW+AYEKN EEE+CPTVVPDHM+H LSE+YW+PHPQTGVFGPPT  +NP+P+
Subjt:  MAANSNYLVIVIARRLTGLGKPVLSLSWKNWTTPCSSQSPSLFRLRAGHWAAYEKNSEEEICPTVVPDHMIHPLSENYWSPHPQTGVFGPPTQHNNPLPN

Query:  DTSAAAGGPKQASVLDLKVWFRHNGLEDPEKPHFL
        DTS   GG K+ SVL+LKVWFRH  LEDPEKPH L
Subjt:  DTSAAAGGPKQASVLDLKVWFRHNGLEDPEKPHFL

XP_022957877.1 late embryogenesis abundant protein At5g17165-like [Cucurbita moschata]3.9e-3462.99Show/hide
Query:  MAANSNYLVIVIARRLTGLGKPVLSLSWKNWTTPCSSQSPSLFRLRAGHWAAYEKNSEEEICPTVVPDHMIHPLSENYWSPHPQTGVFGPPTQHNNPLPN
        MAA SN L+I    RL  L  P+  L            SPSLF LRAGHW+AYEKN EEE+CPTVVPDHMIH LSE+YW+PHPQTGVFGPP   +NP+P+
Subjt:  MAANSNYLVIVIARRLTGLGKPVLSLSWKNWTTPCSSQSPSLFRLRAGHWAAYEKNSEEEICPTVVPDHMIHPLSENYWSPHPQTGVFGPPTQHNNPLPN

Query:  DTSAAAGGPKQASVLDLKVWFRHNGLE
        DTS  AGG K+ SVL+LKVWFRH  LE
Subjt:  DTSAAAGGPKQASVLDLKVWFRHNGLE

XP_022995249.1 late embryogenesis abundant protein At5g17165-like [Cucurbita maxima]6.9e-3964.44Show/hide
Query:  MAANSNYLVIVIARRLTGLGKPVLSLSWKNWTTPCSSQSPSLFRLRAGHWAAYEKNSEEEICPTVVPDHMIHPLSENYWSPHPQTGVFGPPTQHNNPLPN
        MAA SN L+I    RL  L  PV  L            SPSLF LRAGHW+AYEKN EEE+CPTVVPDHMIH +SE+YW+PHPQTGVFGPP   +NP+P+
Subjt:  MAANSNYLVIVIARRLTGLGKPVLSLSWKNWTTPCSSQSPSLFRLRAGHWAAYEKNSEEEICPTVVPDHMIHPLSENYWSPHPQTGVFGPPTQHNNPLPN

Query:  DTSAAAGGPKQASVLDLKVWFRHNGLEDPEKPHFL
        DTS  AGG K+ SVL+LKVWFRH  LEDPEKPH L
Subjt:  DTSAAAGGPKQASVLDLKVWFRHNGLEDPEKPHFL

XP_023532525.1 late embryogenesis abundant protein At5g17165-like [Cucurbita pepo subsp. pepo]1.5e-3863.7Show/hide
Query:  MAANSNYLVIVIARRLTGLGKPVLSLSWKNWTTPCSSQSPSLFRLRAGHWAAYEKNSEEEICPTVVPDHMIHPLSENYWSPHPQTGVFGPPTQHNNPLPN
        MAA SN L+I    RL  L  P+  L            SPSLF LRAGHW+AYEKN EEE+CPTVVPDHMIH +SE+YW+PHPQTGVFGPP   +NP+P+
Subjt:  MAANSNYLVIVIARRLTGLGKPVLSLSWKNWTTPCSSQSPSLFRLRAGHWAAYEKNSEEEICPTVVPDHMIHPLSENYWSPHPQTGVFGPPTQHNNPLPN

Query:  DTSAAAGGPKQASVLDLKVWFRHNGLEDPEKPHFL
        DTS  AGG K+ SVL+LKVWFRH  LEDPEKPH L
Subjt:  DTSAAAGGPKQASVLDLKVWFRHNGLEDPEKPHFL

XP_038875585.1 late embryogenesis abundant protein At5g17165-like [Benincasa hispida]7.2e-2856.82Show/hide
Query:  SNYLVIVIARRLTGLGKPVLSLSWKNWTTPCSSQSPS-LFRLRAGHWAAYEKNSEEEICPTVVPDHMIHP-LSENYWSPHPQTGVFGPPTQH--NNPLPN
        S++ +I+ + R   L  P  SLS        S   PS  F LRA HW+AYEKN EE+I PTVVPDH+IH  +SENYW+PHP+TGVFGPP  H   + +PN
Subjt:  SNYLVIVIARRLTGLGKPVLSLSWKNWTTPCSSQSPS-LFRLRAGHWAAYEKNSEEEICPTVVPDHMIHP-LSENYWSPHPQTGVFGPPTQH--NNPLPN

Query:  DTSAAAGGPKQASVLDLKVWFRHNGLEDPEKP
        DTSA   G K+ SVLD+K WFRHNGLED EKP
Subjt:  DTSAAAGGPKQASVLDLKVWFRHNGLEDPEKP

TrEMBL top hitse value%identityAlignment
A0A0A0KRJ5 Uncharacterized protein5.6e-2662.5Show/hide
Query:  FRLRAGHWAAYEKNSEEEICPTVVPDHMI-HPLSENYWSPHPQTGVFGPPTQHNN--PLPNDTSAAAGGPKQASVLDLKVWFRHNGLEDPEKPHFL
        F  R+ HW+AYEKN E++I PT+VP+H+I   LSE+YW PHP+TGVFGPP  H+N   +PNDTSA   G  + SVL+LK WFRHNGLED EKPH L
Subjt:  FRLRAGHWAAYEKNSEEEICPTVVPDHMI-HPLSENYWSPHPQTGVFGPPTQHNN--PLPNDTSAAAGGPKQASVLDLKVWFRHNGLEDPEKPHFL

A0A1S4E6U6 uncharacterized protein LOC1035046948.6e-2755.07Show/hide
Query:  NYLVIVIARRLTGLGKPVLSLSWKNWTTPCSSQSPSLF-----RLRAGHWAAYEKNSEEEICPTVVPDHMI-HPLSENYWSPHPQTGVFGPPTQHNN--P
        N  +IV+A   T    P LSL          S SP LF       RA HW+AYEKN E+ I PT+VP+ +I H LS+NYW PHPQTGVFGPP  H+N   
Subjt:  NYLVIVIARRLTGLGKPVLSLSWKNWTTPCSSQSPSLF-----RLRAGHWAAYEKNSEEEICPTVVPDHMI-HPLSENYWSPHPQTGVFGPPTQHNN--P

Query:  LPNDTSAAAGGPKQASVLDLKVWFRHNGLEDPEKPHFL
        LPNDTSA   G  + SVL+LK WFRHNGLED EKPH L
Subjt:  LPNDTSAAAGGPKQASVLDLKVWFRHNGLEDPEKPHFL

A0A5A7UIY1 Uncharacterized protein1.5e-2662.62Show/hide
Query:  SQSPSLF-----RLRAGHWAAYEKNSEEEICPTVVPDHMI-HPLSENYWSPHPQTGVFGPPTQH--NNPLPNDTSAAAGGPKQASVLDLKVWFRHNGLED
        S SP LF       RA HW+AYEKN E+ I PT+VP+ +I H LS+NYW PHPQTGVFGPP  H  ++ LPNDTS  AGG +  SVL+LK WFRHNGLED
Subjt:  SQSPSLF-----RLRAGHWAAYEKNSEEEICPTVVPDHMI-HPLSENYWSPHPQTGVFGPPTQH--NNPLPNDTSAAAGGPKQASVLDLKVWFRHNGLED

Query:  PEKPHFL
         EKPH L
Subjt:  PEKPHFL

A0A6J1H0D3 late embryogenesis abundant protein At5g17165-like1.9e-3462.99Show/hide
Query:  MAANSNYLVIVIARRLTGLGKPVLSLSWKNWTTPCSSQSPSLFRLRAGHWAAYEKNSEEEICPTVVPDHMIHPLSENYWSPHPQTGVFGPPTQHNNPLPN
        MAA SN L+I    RL  L  P+  L            SPSLF LRAGHW+AYEKN EEE+CPTVVPDHMIH LSE+YW+PHPQTGVFGPP   +NP+P+
Subjt:  MAANSNYLVIVIARRLTGLGKPVLSLSWKNWTTPCSSQSPSLFRLRAGHWAAYEKNSEEEICPTVVPDHMIHPLSENYWSPHPQTGVFGPPTQHNNPLPN

Query:  DTSAAAGGPKQASVLDLKVWFRHNGLE
        DTS  AGG K+ SVL+LKVWFRH  LE
Subjt:  DTSAAAGGPKQASVLDLKVWFRHNGLE

A0A6J1K564 late embryogenesis abundant protein At5g17165-like3.4e-3964.44Show/hide
Query:  MAANSNYLVIVIARRLTGLGKPVLSLSWKNWTTPCSSQSPSLFRLRAGHWAAYEKNSEEEICPTVVPDHMIHPLSENYWSPHPQTGVFGPPTQHNNPLPN
        MAA SN L+I    RL  L  PV  L            SPSLF LRAGHW+AYEKN EEE+CPTVVPDHMIH +SE+YW+PHPQTGVFGPP   +NP+P+
Subjt:  MAANSNYLVIVIARRLTGLGKPVLSLSWKNWTTPCSSQSPSLFRLRAGHWAAYEKNSEEEICPTVVPDHMIHPLSENYWSPHPQTGVFGPPTQHNNPLPN

Query:  DTSAAAGGPKQASVLDLKVWFRHNGLEDPEKPHFL
        DTS  AGG K+ SVL+LKVWFRH  LEDPEKPH L
Subjt:  DTSAAAGGPKQASVLDLKVWFRHNGLEDPEKPHFL

SwissProt top hitse value%identityAlignment
F4KFM8 Late embryogenesis abundant protein At5g171659.2e-1848.91Show/hide
Query:  LFRLRAGHWAAYEKNSEEEICPTVVPDHMIHPLSENYWSPHPQTGVFGPPTQHNNPLPNDTSAAAGGPKQASVLDLKVWFRHNGLEDPEKPH
        LF  R  H +AY+KN EEE+ P+ VPD MI P S+ YWSPHPQTGVFGP +   N           G ++ SV++ K WFR   LED +K H
Subjt:  LFRLRAGHWAAYEKNSEEEICPTVVPDHMIHPLSENYWSPHPQTGVFGPPTQHNNPLPNDTSAAAGGPKQASVLDLKVWFRHNGLEDPEKPH

Arabidopsis top hitse value%identityAlignment
AT3G03150.1 unknown protein1.2e-1745.45Show/hide
Query:  RAGHWAAYEKNSEEEICPTVVPDHMIHPLSENYWSPHPQTGVFGPPTQHNNPLPNDTSAAAGGPKQASVLDLKVWFRHNGLEDPEKPH
        R+GH +AY+KN E+E+  + VPD +I P S+ YWSPHP+TGVFGP T  +      ++ A G  +  +VL+   WFR   LED +K H
Subjt:  RAGHWAAYEKNSEEEICPTVVPDHMIHPLSENYWSPHPQTGVFGPPTQHNNPLPNDTSAAAGGPKQASVLDLKVWFRHNGLEDPEKPH

AT5G17165.1 unknown protein6.5e-1948.91Show/hide
Query:  LFRLRAGHWAAYEKNSEEEICPTVVPDHMIHPLSENYWSPHPQTGVFGPPTQHNNPLPNDTSAAAGGPKQASVLDLKVWFRHNGLEDPEKPH
        LF  R  H +AY+KN EEE+ P+ VPD MI P S+ YWSPHPQTGVFGP +   N           G ++ SV++ K WFR   LED +K H
Subjt:  LFRLRAGHWAAYEKNSEEEICPTVVPDHMIHPLSENYWSPHPQTGVFGPPTQHNNPLPNDTSAAAGGPKQASVLDLKVWFRHNGLEDPEKPH


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCGCCAATTCGAATTACCTTGTTATTGTTATTGCTAGACGACTCACCGGTTTAGGGAAGCCAGTCCTTAGCCTCAGCTGGAAGAATTGGACCACCCCTTGCTCCTC
TCAATCTCCCTCCCTCTTCCGCCTCCGGGCAGGTCATTGGGCAGCATATGAGAAGAACTCAGAGGAGGAAATTTGCCCTACAGTGGTACCAGATCATATGATCCACCCTC
TCTCTGAAAACTACTGGTCGCCACATCCACAAACTGGAGTTTTTGGGCCACCAACTCAACACAATAATCCTCTTCCGAACGACACGTCGGCTGCTGCTGGTGGCCCTAAA
CAAGCCTCAGTTTTGGACCTCAAGGTTTGGTTCCGACACAACGGCCTCGAGGACCCTGAGAAGCCACATTTTCTGTGA
mRNA sequenceShow/hide mRNA sequence
CTAATTTAACTCTCCAATTCTTCAAATATAAATCCTTTTTTAACATAAACCGTTCACTCCTCACTCCACCCATTATTCTTAAAACTAAAATCACATTAATATTCTTTTGA
AAAGTTCCTCTTTTAATTTTCTTCTTTTTATCCATTGCATGGCCGCCAATTCGAATTACCTTGTTATTGTTATTGCTAGACGACTCACCGGTTTAGGGAAGCCAGTCCTT
AGCCTCAGCTGGAAGAATTGGACCACCCCTTGCTCCTCTCAATCTCCCTCCCTCTTCCGCCTCCGGGCAGGTCATTGGGCAGCATATGAGAAGAACTCAGAGGAGGAAAT
TTGCCCTACAGTGGTACCAGATCATATGATCCACCCTCTCTCTGAAAACTACTGGTCGCCACATCCACAAACTGGAGTTTTTGGGCCACCAACTCAACACAATAATCCTC
TTCCGAACGACACGTCGGCTGCTGCTGGTGGCCCTAAACAAGCCTCAGTTTTGGACCTCAAGGTTTGGTTCCGACACAACGGCCTCGAGGACCCTGAGAAGCCACATTTT
CTGTGATCTCCACGCC
Protein sequenceShow/hide protein sequence
MAANSNYLVIVIARRLTGLGKPVLSLSWKNWTTPCSSQSPSLFRLRAGHWAAYEKNSEEEICPTVVPDHMIHPLSENYWSPHPQTGVFGPPTQHNNPLPNDTSAAAGGPK
QASVLDLKVWFRHNGLEDPEKPHFL