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Tan0017352 (gene) of Snake gourd v1 genome

Gene IDTan0017352
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationLG05:72853272..72854508
RNA-Seq ExpressionTan0017352
SyntenyTan0017352
Gene Ontology termsNA
InterPro domainsIPR036691 - Endonuclease/exonuclease/phosphatase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022155286.1 uncharacterized protein LOC111022423 [Momordica charantia]6.3e-1640.16Show/hide
Query:  VVGEDFNELLSIDKKRRRVDRRSRQMELFKEAIDVGKLIDPGFIGDAFTWRRNNTLTNKIWERLDRFFINWSLKEKFRSIRVNHLIFHHFDHHPIL--FT
        ++G DFNE+L   +K   V RR   M+ FK+ +D+  L+DPGF+GD FTW   +     IWERLDRF IN ++ +   ++ + HL F   DH PIL  + 
Subjt:  VVGEDFNELLSIDKKRRRVDRRSRQMELFKEAIDVGKLIDPGFIGDAFTWRRNNTLTNKIWERLDRFFINWSLKEKFRSIRVNHLIFHHFDHHPIL--FT

Query:  SSNEQEGKSRFFKEPMRFEEGWAQIKE
           E     R  + P RFEE W   +E
Subjt:  SSNEQEGKSRFFKEPMRFEEGWAQIKE

XP_023924963.1 uncharacterized protein LOC112036394 [Quercus suber]4.2e-1239.52Show/hide
Query:  DFNELLSIDKKRRRVDRRSRQMELFKEAIDVGKLIDPGFIGDAFTWRRNNTLTNKIWERLDR--FFINWSLKEKFRSIRVNHLIFHHFDHHPILFTSSNE
        DFNE+L  ++K+  +DR  RQM+ F++A+D   L D G+ G  FTW       + +W RLDR    ++W L  KF + RV+HL   H DH P+L  S +E
Subjt:  DFNELLSIDKKRRRVDRRSRQMELFKEAIDVGKLIDPGFIGDAFTWRRNNTLTNKIWERLDR--FFINWSLKEKFRSIRVNHLIFHHFDHHPILFTSSNE

Query:  QEGKSRFFKE--PMRFEEGWAQIK
             RF+++  P RFE  W + K
Subjt:  QEGKSRFFKE--PMRFEEGWAQIK

XP_030925054.1 uncharacterized protein LOC115952115 [Quercus lobata]9.4e-1241.67Show/hide
Query:  DFNELLSIDKKRRRVDRRSRQMELFKEAIDVGKLIDPGFIGDAFTWRRNNTLTNKIWERLDR--FFINWSLKEKFRSIRVNHLIFHHFDHHPILFTSSNE
        DFNE+L  D+K+  +DR  RQM+ F++A+D  +L D GF G  FTW         +W RLDR    ++W L  KF + R++HL   H DH PIL +   E
Subjt:  DFNELLSIDKKRRRVDRRSRQMELFKEAIDVGKLIDPGFIGDAFTWRRNNTLTNKIWERLDR--FFINWSLKEKFRSIRVNHLIFHHFDHHPILFTSSNE

Query:  QEGKSRFFKE--PMRFEEGW
        Q   +RF+K+  P  FE  W
Subjt:  QEGKSRFFKE--PMRFEEGW

XP_030932623.1 uncharacterized protein LOC115958352 [Quercus lobata]1.1e-1242.5Show/hide
Query:  DFNELLSIDKKRRRVDRRSRQMELFKEAIDVGKLIDPGFIGDAFTWRRNNTLTNKIWERLDR--FFINWSLKEKFRSIRVNHLIFHHFDHHPILFTSSNE
        DFNE+L  D+K+  +DR  RQM+ F++A+D  +L D GF G  FTW         +W RLDR    ++W L  KF + R++HL   H DH PIL +   E
Subjt:  DFNELLSIDKKRRRVDRRSRQMELFKEAIDVGKLIDPGFIGDAFTWRRNNTLTNKIWERLDR--FFINWSLKEKFRSIRVNHLIFHHFDHHPILFTSSNE

Query:  QEGKSRFFKE--PMRFEEGW
        Q   +RF+K+  P RFE  W
Subjt:  QEGKSRFFKE--PMRFEEGW

XP_042942906.1 uncharacterized protein LOC122277092 [Carya illinoinensis]2.1e-1135.85Show/hide
Query:  GMGGRRSASKRHGCACPVGALR--QSELWRSRVEVVGEDFNELLSIDKKRRRVDRRSRQMELFKEAIDVGKLIDPGFIGDAFTWRRNNTLTNKIWERLDR
        G  G   A+KR      +  L+   +E W      V  DFNE+LS ++KR    R   QM  F+EA++V  L D G++G+ FTW   ++      ERLDR
Subjt:  GMGGRRSASKRHGCACPVGALR--QSELWRSRVEVVGEDFNELLSIDKKRRRVDRRSRQMELFKEAIDVGKLIDPGFIGDAFTWRRNNTLTNKIWERLDR

Query:  FFINWSLKEKFRSIRVNHLIFHHFDHHPILFTSSNEQEGKSRFFKEPMRFEEGWAQIKE
        F +N   K +F+ ++V  L+    DH P+L T   E  G  R  +   RFE  W  IKE
Subjt:  FFINWSLKEKFRSIRVNHLIFHHFDHHPILFTSSNEQEGKSRFFKEPMRFEEGWAQIKE

TrEMBL top hitse value%identityAlignment
A0A2N9FBQ4 Reverse transcriptase domain-containing protein5.4e-1340.52Show/hide
Query:  DFNELLSIDKKRRRVDRRSRQMELFKEAIDVGKLIDPGFIGDAFTWRRNNTLTNKIWERLDRFFINWSLKEKFRSIRVNHLIFHHFDHHPILFTSSNEQE
        DFNEL+ +++K+ R+ R  RQM+LF++ +D    +D GF G +FTW  NN + +  WERLDR         +F SIRV+HL     DH P+  TS    +
Subjt:  DFNELLSIDKKRRRVDRRSRQMELFKEAIDVGKLIDPGFIGDAFTWRRNNTLTNKIWERLDRFFINWSLKEKFRSIRVNHLIFHHFDHHPILFTSSNEQE

Query:  GKSRFFKEPMRFEEGW
              ++P RFEE W
Subjt:  GKSRFFKEPMRFEEGW

A0A2N9HE46 Uncharacterized protein5.4e-1340.52Show/hide
Query:  DFNELLSIDKKRRRVDRRSRQMELFKEAIDVGKLIDPGFIGDAFTWRRNNTLTNKIWERLDRFFINWSLKEKFRSIRVNHLIFHHFDHHPILFTSSNEQE
        DFNEL+ +++K+ R+ R  RQM+LF++ +D    +D GF G +FTW  NN + +  WERLDR         +F SIRV+HL     DH P+  TS    +
Subjt:  DFNELLSIDKKRRRVDRRSRQMELFKEAIDVGKLIDPGFIGDAFTWRRNNTLTNKIWERLDRFFINWSLKEKFRSIRVNHLIFHHFDHHPILFTSSNEQE

Query:  GKSRFFKEPMRFEEGW
              ++P RFEE W
Subjt:  GKSRFFKEPMRFEEGW

A0A2N9HV89 Reverse transcriptase domain-containing protein3.5e-1237.93Show/hide
Query:  DFNELLSIDKKRRRVDRRSRQMELFKEAIDVGKLIDPGFIGDAFTWRRNNTLTNKIWERLDRFFINWSLKEKFRSIRVNHLIFHHFDHHPILFTSSNEQE
        DFNE+    +K+ R+ R  +QMELF+EA+D  +L+D G+ G  +TW  N   T  +W RLDR   +     KF+  +V HL  +  DH P+L + +N+  
Subjt:  DFNELLSIDKKRRRVDRRSRQMELFKEAIDVGKLIDPGFIGDAFTWRRNNTLTNKIWERLDRFFINWSLKEKFRSIRVNHLIFHHFDHHPILFTSSNEQE

Query:  GKSRFFKEPMRFEEGW
              K+P RFE+ W
Subjt:  GKSRFFKEPMRFEEGW

A0A2N9J7Z5 Reverse transcriptase domain-containing protein3.5e-1237.93Show/hide
Query:  DFNELLSIDKKRRRVDRRSRQMELFKEAIDVGKLIDPGFIGDAFTWRRNNTLTNKIWERLDRFFINWSLKEKFRSIRVNHLIFHHFDHHPILFTSSNEQE
        DFNE+    +K+ R+ R  +QMELF+EA+D  +L+D G+ G  +TW  N   T  +W RLDR   +     KF+  +V HL  +  DH P+L + +N+  
Subjt:  DFNELLSIDKKRRRVDRRSRQMELFKEAIDVGKLIDPGFIGDAFTWRRNNTLTNKIWERLDRFFINWSLKEKFRSIRVNHLIFHHFDHHPILFTSSNEQE

Query:  GKSRFFKEPMRFEEGW
              K+P RFE+ W
Subjt:  GKSRFFKEPMRFEEGW

A0A6J1DRA0 uncharacterized protein LOC1110224233.0e-1640.16Show/hide
Query:  VVGEDFNELLSIDKKRRRVDRRSRQMELFKEAIDVGKLIDPGFIGDAFTWRRNNTLTNKIWERLDRFFINWSLKEKFRSIRVNHLIFHHFDHHPIL--FT
        ++G DFNE+L   +K   V RR   M+ FK+ +D+  L+DPGF+GD FTW   +     IWERLDRF IN ++ +   ++ + HL F   DH PIL  + 
Subjt:  VVGEDFNELLSIDKKRRRVDRRSRQMELFKEAIDVGKLIDPGFIGDAFTWRRNNTLTNKIWERLDRFFINWSLKEKFRSIRVNHLIFHHFDHHPIL--FT

Query:  SSNEQEGKSRFFKEPMRFEEGWAQIKE
           E     R  + P RFEE W   +E
Subjt:  SSNEQEGKSRFFKEPMRFEEGWAQIKE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTCACCCATCGACAAACGGAAGGAAGAAAAGAGAAGAAGAATGGGGTGGCATGGGTGGTCGTCGGTCGGCAAGCAAACGACATGGGTGTGCGTGCCCCGTCGGTGC
TTTGCGTCAGTCGGAACTCTGGAGGTCGAGGGTGGAGGTGGTTGGAGAAGATTTCAACGAGTTACTATCCATTGATAAGAAACGGAGAAGGGTTGATAGGAGAAGCCGTC
AAATGGAATTATTTAAGGAAGCCATCGACGTTGGCAAGCTCATCGATCCGGGCTTTATTGGAGATGCGTTCACCTGGAGGAGAAACAATACCCTAACAAACAAGATCTGG
GAGAGGCTTGATCGATTTTTTATTAATTGGTCTCTAAAAGAAAAGTTCAGAAGCATTCGGGTCAATCACCTTATTTTCCATCACTTTGATCACCACCCTATTCTCTTTAC
GTCTTCCAACGAGCAAGAAGGAAAAAGTCGTTTCTTTAAAGAACCGATGCGTTTTGAAGAAGGCTGGGCTCAGATAAAGGAAGCATAA
mRNA sequenceShow/hide mRNA sequence
ATGGTTCACCCATCGACAAACGGAAGGAAGAAAAGAGAAGAAGAATGGGGTGGCATGGGTGGTCGTCGGTCGGCAAGCAAACGACATGGGTGTGCGTGCCCCGTCGGTGC
TTTGCGTCAGTCGGAACTCTGGAGGTCGAGGGTGGAGGTGGTTGGAGAAGATTTCAACGAGTTACTATCCATTGATAAGAAACGGAGAAGGGTTGATAGGAGAAGCCGTC
AAATGGAATTATTTAAGGAAGCCATCGACGTTGGCAAGCTCATCGATCCGGGCTTTATTGGAGATGCGTTCACCTGGAGGAGAAACAATACCCTAACAAACAAGATCTGG
GAGAGGCTTGATCGATTTTTTATTAATTGGTCTCTAAAAGAAAAGTTCAGAAGCATTCGGGTCAATCACCTTATTTTCCATCACTTTGATCACCACCCTATTCTCTTTAC
GTCTTCCAACGAGCAAGAAGGAAAAAGTCGTTTCTTTAAAGAACCGATGCGTTTTGAAGAAGGCTGGGCTCAGATAAAGGAAGCATAA
Protein sequenceShow/hide protein sequence
MVHPSTNGRKKREEEWGGMGGRRSASKRHGCACPVGALRQSELWRSRVEVVGEDFNELLSIDKKRRRVDRRSRQMELFKEAIDVGKLIDPGFIGDAFTWRRNNTLTNKIW
ERLDRFFINWSLKEKFRSIRVNHLIFHHFDHHPILFTSSNEQEGKSRFFKEPMRFEEGWAQIKEA