; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0017376 (gene) of Snake gourd v1 genome

Gene IDTan0017376
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionTATA-binding protein-associated factor 2N-like
Genome locationLG06:2943278..2945257
RNA-Seq ExpressionTan0017376
SyntenyTan0017376
Gene Ontology termsGO:0034641 - cellular nitrogen compound metabolic process (biological process)
GO:0044267 - cellular protein metabolic process (biological process)
GO:0140513 - nuclear protein-containing complex (cellular component)
GO:0003723 - RNA binding (molecular function)
GO:0008233 - peptidase activity (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR001876 - Zinc finger, RanBP2-type
IPR036443 - Zinc finger, RanBP2-type superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6593432.1 hypothetical protein SDJN03_12908, partial [Cucurbita argyrosperma subsp. sororia]3.6e-7483.04Show/hide
Query:  MNRPGDWNCRSCQHLNFQRRECCQRCGESKFGAEFGVFGG-----RGRSI----PSSYGGIASPGSDVRPGDWYCGVGNCGTHNFANRSSCFACGAFKDE
        MNRPGDWNCRSCQHLNFQRRECCQRCGES+F A+ G+FGG     RGRSI     SSYGG+ASPGSDVRPGDWYCGV NCGTHNFANRSSCF CGAFKDE
Subjt:  MNRPGDWNCRSCQHLNFQRRECCQRCGESKFGAEFGVFGG-----RGRSI----PSSYGGIASPGSDVRPGDWYCGVGNCGTHNFANRSSCFACGAFKDE

Query:  SAAAAAAGGGLDFDMSSRGSRSFGFGFGSNGSRGGASWKSGDWICSRSGCNVHNFASRMECFRCNAPRDPF
        SAA AA  GG DFD++ RGSRS  FGFGSNGSRGG+SWKSGDWICSRSGCNVHNFASRMECFRCNAPRD F
Subjt:  SAAAAAAGGGLDFDMSSRGSRSFGFGFGSNGSRGGASWKSGDWICSRSGCNVHNFASRMECFRCNAPRDPF

XP_022964373.1 uncharacterized RNA-binding protein C17H9.04c-like [Cucurbita moschata]3.6e-7483.04Show/hide
Query:  MNRPGDWNCRSCQHLNFQRRECCQRCGESKFGAEFGVFGG-----RGRSI----PSSYGGIASPGSDVRPGDWYCGVGNCGTHNFANRSSCFACGAFKDE
        MNRPGDWNCRSCQHLNFQRRECCQRCGES+F A+ G+FGG     RGRSI     SSYGG+ASPGSDVRPGDWYCGV NCGTHNFANRSSCF CGAFKDE
Subjt:  MNRPGDWNCRSCQHLNFQRRECCQRCGESKFGAEFGVFGG-----RGRSI----PSSYGGIASPGSDVRPGDWYCGVGNCGTHNFANRSSCFACGAFKDE

Query:  SAAAAAAGGGLDFDMSSRGSRSFGFGFGSNGSRGGASWKSGDWICSRSGCNVHNFASRMECFRCNAPRDPF
        SAA AA  GG DFD++ RGSRS  FGFGSNGSRGG+SWKSGDWICSRSGCNVHNFASRMECFRCNAPRD F
Subjt:  SAAAAAAGGGLDFDMSSRGSRSFGFGFGSNGSRGGASWKSGDWICSRSGCNVHNFASRMECFRCNAPRDPF

XP_023000400.1 uncharacterized RNA-binding protein C17H9.04c-like [Cucurbita maxima]6.1e-7482.08Show/hide
Query:  MNRPGDWNCRSCQHLNFQRRECCQRCGESKFGAEFGVFGG--RGRSI---------PSSYGGIASPGSDVRPGDWYCGVGNCGTHNFANRSSCFACGAFK
        MNRPGDWNCRSCQHLNFQRRECCQRCGES+F A+ GVFGG  RGRSI          SSYGG+ASPGSDVRPGDWYCGV NCGTHNFANRSSCF CGAFK
Subjt:  MNRPGDWNCRSCQHLNFQRRECCQRCGESKFGAEFGVFGG--RGRSI---------PSSYGGIASPGSDVRPGDWYCGVGNCGTHNFANRSSCFACGAFK

Query:  DESAAAAAAGGGLDFDMSSRGSRSFGFGFGSNGSRGGASWKSGDWICSRSGCNVHNFASRMECFRCNAPRDPF
        DESAA AA  GG D D++ RGSRS  FGFG+NGSRGG+SWKSGDWICSRSGCNVHNFASRMECFRCNAPRDPF
Subjt:  DESAAAAAAGGGLDFDMSSRGSRSFGFGFGSNGSRGGASWKSGDWICSRSGCNVHNFASRMECFRCNAPRDPF

XP_023514793.1 uncharacterized RNA-binding protein C17H9.04c-like isoform X2 [Cucurbita pepo subsp. pepo]1.9e-7583.63Show/hide
Query:  MNRPGDWNCRSCQHLNFQRRECCQRCGESKFGAEFGVFGG-----RGRSI----PSSYGGIASPGSDVRPGDWYCGVGNCGTHNFANRSSCFACGAFKDE
        MNRPGDWNCRSCQHLNFQRRECCQRCGES+F A+ G+FGG     RGRSI     SSYGG+ASPGSDVRPGDWYCGV NCGTHNFANRSSCF CGAFKDE
Subjt:  MNRPGDWNCRSCQHLNFQRRECCQRCGESKFGAEFGVFGG-----RGRSI----PSSYGGIASPGSDVRPGDWYCGVGNCGTHNFANRSSCFACGAFKDE

Query:  SAAAAAAGGGLDFDMSSRGSRSFGFGFGSNGSRGGASWKSGDWICSRSGCNVHNFASRMECFRCNAPRDPF
        S AA AAGGG DFD++ RGSR+  FGFGSNGSRGG+SWKSGDWICSRSGCNVHNFASRMECFRCNAPRDPF
Subjt:  SAAAAAAGGGLDFDMSSRGSRSFGFGFGSNGSRGGASWKSGDWICSRSGCNVHNFASRMECFRCNAPRDPF

XP_038899251.1 uncharacterized RNA-binding protein C17H9.04c-like [Benincasa hispida]5.9e-7787.73Show/hide
Query:  MNRPGDWNCRSCQHLNFQRRECCQRCGESKFGAEFGVFGGRGRSIPSSYGGIA-SPGSDVRPGDWYCGVGNCGTHNFANRSSCFACGAFKDESAAAAAAG
        MNRPGDWNCRSCQHLNFQRRECCQRCGE K GAE GVFGGRGR+IPSSYGG+A SPGSDVRPGDWYCGVGNCGTHNFANRS+CF CGAFKDES AAAA G
Subjt:  MNRPGDWNCRSCQHLNFQRRECCQRCGESKFGAEFGVFGGRGRSIPSSYGGIA-SPGSDVRPGDWYCGVGNCGTHNFANRSSCFACGAFKDESAAAAAAG

Query:  GGLDFDMSSRGSRSFGFGFGSNGSRGGASWKSGDWICSRSGCNVHNFASRMECFRCNAPRDPF
        GG DFD++ RGSRSFGFG  SNG RGG+SW SGDWICSRSGCNVHNFASRMECFRCNAPRD F
Subjt:  GGLDFDMSSRGSRSFGFGFGSNGSRGGASWKSGDWICSRSGCNVHNFASRMECFRCNAPRDPF

TrEMBL top hitse value%identityAlignment
A0A0A0K718 Uncharacterized protein8.1e-6476.92Show/hide
Query:  MNRPGDWNCRSCQHLNFQRRECCQRCGESKFGA--EFGVFGGRGRSIPSSYGG--IASPGSDVRPGDWYCGVGNCGTHNFANRSSCFACGAFKDESAAA-
        MNRPGDWNCRSCQHLNFQRR+CCQRCGE K G   E GVF    RS  SSYGG    SPGSDVRPGDWYCGVGNCGTHNFANRS+CF CGAFKDESAA+ 
Subjt:  MNRPGDWNCRSCQHLNFQRRECCQRCGESKFGA--EFGVFGGRGRSIPSSYGG--IASPGSDVRPGDWYCGVGNCGTHNFANRSSCFACGAFKDESAAA-

Query:  -AAAGGGLDFDMSSRGSRSFGFGFGSNGSRGGAS-WKSGDWICSRSGCNVHNFASRMECFRCNAPRDPF
         AA GGG DFD + R  RSFGFG  +  SRG +S W SGDWICSRSGCNVHNFASRMECFRCNAPRD F
Subjt:  -AAAGGGLDFDMSSRGSRSFGFGFGSNGSRGGAS-WKSGDWICSRSGCNVHNFASRMECFRCNAPRDPF

A0A5D3CJI6 Transcription initiation factor TFIID subunit 15b-like6.4e-6175Show/hide
Query:  MNRPGDWNCRSCQHLNFQRRECCQRCGESKFGA--EFGVFGGR-GRSIPSSYGG--IASPGSDVRPGDWYCGVGNCGTHNFANRSSCFACGAFKDESAAA
        MNRPGDWNCRSCQHLNFQRRECCQRCGE K G   E GVF GR GRS  SSYGG    SPGSDVRPGDWYCGV NCGTHNFANRS+CF CGAFKDESAA+
Subjt:  MNRPGDWNCRSCQHLNFQRRECCQRCGESKFGA--EFGVFGGR-GRSIPSSYGG--IASPGSDVRPGDWYCGVGNCGTHNFANRSSCFACGAFKDESAAA

Query:  A----AAGGGLDFDMSSRGSRSFGFGFGSNGSRGGAS-WKSGDWICSRSGCNVHNFASRMECFRCNAPRDPF
        A      GGG DFD++ R  RS    FG+  SRG  S W SGDWICSR GCNVHNFASRMECFRCNAPRD F
Subjt:  A----AAGGGLDFDMSSRGSRSFGFGFGSNGSRGGAS-WKSGDWICSRSGCNVHNFASRMECFRCNAPRDPF

A0A6J1DB61 transcription initiation factor TFIID subunit 15-like1.3e-6982.42Show/hide
Query:  MNRPGDWNCRSCQHLNFQRRECCQRCGESKFGAEFGVFGGR---GR-SIPSSYGGIASPGSDVRPGDWYCGVGNCGTHNFANRSSCFACGAFKDESAAA-
        MNRPGDW+CRSCQHLNFQRRECCQRCG+SKFG   G  GGR   GR S+PSSYGG+ASPGSDVRPGDWYCGVGNCGTHNFA+RSSCF CGAFKDESAAA 
Subjt:  MNRPGDWNCRSCQHLNFQRRECCQRCGESKFGAEFGVFGGR---GR-SIPSSYGGIASPGSDVRPGDWYCGVGNCGTHNFANRSSCFACGAFKDESAAA-

Query:  AAAGGGLDFDMSSRGSRSFGFGFGSNGSRGGASWKSGDWICSRSGCNVHNFASRMECFRCNAPRD
        A AGGG DFDM SR SR  GFGFG+N SR G+SWKSGDWIC+RSGCN HNFASRMECFRCN PRD
Subjt:  AAAGGGLDFDMSSRGSRSFGFGFGSNGSRGGASWKSGDWICSRSGCNVHNFASRMECFRCNAPRD

A0A6J1HKM2 uncharacterized RNA-binding protein C17H9.04c-like1.7e-7483.04Show/hide
Query:  MNRPGDWNCRSCQHLNFQRRECCQRCGESKFGAEFGVFGG-----RGRSI----PSSYGGIASPGSDVRPGDWYCGVGNCGTHNFANRSSCFACGAFKDE
        MNRPGDWNCRSCQHLNFQRRECCQRCGES+F A+ G+FGG     RGRSI     SSYGG+ASPGSDVRPGDWYCGV NCGTHNFANRSSCF CGAFKDE
Subjt:  MNRPGDWNCRSCQHLNFQRRECCQRCGESKFGAEFGVFGG-----RGRSI----PSSYGGIASPGSDVRPGDWYCGVGNCGTHNFANRSSCFACGAFKDE

Query:  SAAAAAAGGGLDFDMSSRGSRSFGFGFGSNGSRGGASWKSGDWICSRSGCNVHNFASRMECFRCNAPRDPF
        SAA AA  GG DFD++ RGSRS  FGFGSNGSRGG+SWKSGDWICSRSGCNVHNFASRMECFRCNAPRD F
Subjt:  SAAAAAAGGGLDFDMSSRGSRSFGFGFGSNGSRGGASWKSGDWICSRSGCNVHNFASRMECFRCNAPRDPF

A0A6J1KI84 uncharacterized RNA-binding protein C17H9.04c-like3.0e-7482.08Show/hide
Query:  MNRPGDWNCRSCQHLNFQRRECCQRCGESKFGAEFGVFGG--RGRSI---------PSSYGGIASPGSDVRPGDWYCGVGNCGTHNFANRSSCFACGAFK
        MNRPGDWNCRSCQHLNFQRRECCQRCGES+F A+ GVFGG  RGRSI          SSYGG+ASPGSDVRPGDWYCGV NCGTHNFANRSSCF CGAFK
Subjt:  MNRPGDWNCRSCQHLNFQRRECCQRCGESKFGAEFGVFGG--RGRSI---------PSSYGGIASPGSDVRPGDWYCGVGNCGTHNFANRSSCFACGAFK

Query:  DESAAAAAAGGGLDFDMSSRGSRSFGFGFGSNGSRGGASWKSGDWICSRSGCNVHNFASRMECFRCNAPRDPF
        DESAA AA  GG D D++ RGSRS  FGFG+NGSRGG+SWKSGDWICSRSGCNVHNFASRMECFRCNAPRDPF
Subjt:  DESAAAAAAGGGLDFDMSSRGSRSFGFGFGSNGSRGGASWKSGDWICSRSGCNVHNFASRMECFRCNAPRDPF

SwissProt top hitse value%identityAlignment
O13801 Uncharacterized RNA-binding protein C17H9.04c2.5e-0927.94Show/hide
Query:  RPGDWNCRSCQHLNFQRRECCQRC------------GESKFGAEF---GVFGGRGRSIPSSYGGIA----------------------------SPGSDV
        RPGDWNC  C   NFQRR  C RC            G + F  +F     +G       ++YGG                              S G +V
Subjt:  RPGDWNCRSCQHLNFQRRECCQRC------------GESKFGAEF---GVFGGRGRSIPSSYGGIA----------------------------SPGSDV

Query:  --RPGDWYCGVGNCGTHNFANRSSCFACGAFKDESAAAAAAGGGLDFDMSSRGSRSF-------------------------------GFGFGSNG----
          R GDW CG   CG HNFA    C  CGA +  +A  A    G      S  S S                                 FG G NG    
Subjt:  --RPGDWYCGVGNCGTHNFANRSSCFACGAFKDESAAAAAAGGGLDFDMSSRGSRSF-------------------------------GFGFGSNG----

Query:  -----------SRGGASWKSGDWICSRSGCNVHNFASRMECFRCNAP
                   SR   +   GDW+C    C   NF  R  C RCNAP
Subjt:  -----------SRGGASWKSGDWICSRSGCNVHNFASRMECFRCNAP

Arabidopsis top hitse value%identityAlignment
AT2G17975.1 zinc finger (Ran-binding) family protein4.2e-1231.14Show/hide
Query:  RPGDWNCRSCQHLNFQRRECCQRCGESKFGAEFGVFGGRGRSIPSSYGGIASPGSDVRP--GDWYCGVGNCGTHNFANRSSCFACGAFKDESAAAAAA--
        R GDW C  C++ N+  R  C RC + +   +                   SP S   P  GDW C    C  +N+A+R  C  CG  K+ +A +A A  
Subjt:  RPGDWNCRSCQHLNFQRRECCQRCGESKFGAEFGVFGGRGRSIPSSYGGIASPGSDVRP--GDWYCGVGNCGTHNFANRSSCFACGAFKDESAAAAAA--

Query:  GGGLDFDMS--SRGSRS-------FGFGFGSNGSRGGASWKSGDWICSRSGCNVHNFASRMECFRCN
        G  L   +   +RG  S         F   +N +     W+SGDWIC    C  HN++SR++C +CN
Subjt:  GGGLDFDMS--SRGSRS-------FGFGFGSNGSRGGASWKSGDWICSRSGCNVHNFASRMECFRCN

AT2G26695.1 Ran BP2/NZF zinc finger-like superfamily protein8.3e-2941.03Show/hide
Query:  GDWNCRSCQHLNFQRRECCQRCGESKFGAEFGVFGGRGRSIPSSYGGIASPGSDVRPGDWYCGVGNCGTHNFANRSSCFACGAFKDESAAAAAAGGGLDF
        GDW C +CQH NF++RE CQ+CG  KFG         G  + S+Y       ++V  GDWYCG  NCG+HN+A+R+SC+ CG  K            +++
Subjt:  GDWNCRSCQHLNFQRRECCQRCGESKFGAEFGVFGGRGRSIPSSYGGIASPGSDVRPGDWYCGVGNCGTHNFANRSSCFACGAFKDESAAAAAAGGGLDF

Query:  DMSSRGSRSFGFGFGSNGSRGGASWKSGDWICSRSGCNVHNFASRMECFRCNAPRD
             G++     +G++G+     WK+GDW+C R GC VHN+ASR ECF+C   RD
Subjt:  DMSSRGSRSFGFGFGSNGSRGGASWKSGDWICSRSGCNVHNFASRMECFRCNAPRD

AT3G15680.1 Ran BP2/NZF zinc finger-like superfamily protein7.7e-5161.54Show/hide
Query:  MNRPGDWNCRSCQHLNFQRRECCQRCGESKF------GAEFGVFGGRGRSIPSSYGGIASPGSDVRPGDWYCGVGNCGTHNFANRSSCFACGAFKDESAA
        M+RPGDWNCRSC HLNFQRR+ CQRCG+S+       G +FG FGGR     S++G   + GSDVRPGDWYC VGNCGTHNFA+RS+CF CG FKDE+ A
Subjt:  MNRPGDWNCRSCQHLNFQRRECCQRCGESKF------GAEFGVFGGRGRSIPSSYGGIASPGSDVRPGDWYCGVGNCGTHNFANRSSCFACGAFKDESAA

Query:  AAAA---GGGLDFDMSSRGSRSFGFGFGSNGSRGGASWKSGDWICSRSGCNVHNFASRMECFRCNAPRD
               GG   FD     SR  G G       G +SWKSGDWIC+R GCN HNFASRMECFRCNAPRD
Subjt:  AAAA---GGGLDFDMSSRGSRSFGFGFGSNGSRGGASWKSGDWICSRSGCNVHNFASRMECFRCNAPRD

AT5G25490.1 Ran BP2/NZF zinc finger-like superfamily protein1.2e-4860.12Show/hide
Query:  MNRPGDWNCRSCQHLNFQRRECCQRCGESKFG--AEFGVFGGRGRSIPSSYGGIASPGSDVRPGDWYCGVGNCGTHNFANRSSCFACGAFKDE--SAAAA
        MNRPGDWNCR C HLNFQRR+ CQRC E + G  +   + G  GR + SS+G   + G DVRPGDWYC +G+CGTHNFANRSSCF CGA KDE   ++AA
Subjt:  MNRPGDWNCRSCQHLNFQRRECCQRCGESKFG--AEFGVFGGRGRSIPSSYGGIASPGSDVRPGDWYCGVGNCGTHNFANRSSCFACGAFKDE--SAAAA

Query:  AAGGGLDFDMSSRGSRSFGFGFGSNGSRGGAS----WKSGDWICSRSGCNVHNFASRMECFRCNAPRD
        A  G +D ++   G R   FGFG + S GG +    WKSGDWIC RSGCN HNFASR ECFRCNAP++
Subjt:  AAGGGLDFDMSSRGSRSFGFGFGSNGSRGGAS----WKSGDWICSRSGCNVHNFASRMECFRCNAPRD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAACAGGCCGGGGGATTGGAACTGCAGATCATGCCAGCACCTGAACTTCCAACGGCGGGAGTGCTGTCAACGGTGTGGAGAATCCAAATTCGGGGCTGAATTTGGGGT
GTTCGGCGGCCGAGGAAGGAGCATTCCGTCGTCGTACGGAGGAATTGCCTCGCCGGGCTCCGACGTCCGTCCCGGCGACTGGTACTGCGGTGTCGGCAACTGTGGGACCC
ACAACTTTGCGAACCGGTCGAGCTGCTTCGCATGCGGTGCGTTTAAGGATGAGTCAGCGGCGGCGGCGGCTGCCGGCGGAGGGCTTGATTTTGATATGTCGTCTCGTGGA
TCGAGGAGCTTTGGATTTGGATTTGGAAGCAATGGCTCACGTGGTGGGGCTTCTTGGAAGTCTGGTGATTGGATTTGTTCCAGGTCAGGGTGCAACGTACATAACTTCGC
AAGTAGAATGGAATGTTTCAGATGCAACGCTCCAAGAGACCCATTCTAA
mRNA sequenceShow/hide mRNA sequence
ATGAACAGGCCGGGGGATTGGAACTGCAGATCATGCCAGCACCTGAACTTCCAACGGCGGGAGTGCTGTCAACGGTGTGGAGAATCCAAATTCGGGGCTGAATTTGGGGT
GTTCGGCGGCCGAGGAAGGAGCATTCCGTCGTCGTACGGAGGAATTGCCTCGCCGGGCTCCGACGTCCGTCCCGGCGACTGGTACTGCGGTGTCGGCAACTGTGGGACCC
ACAACTTTGCGAACCGGTCGAGCTGCTTCGCATGCGGTGCGTTTAAGGATGAGTCAGCGGCGGCGGCGGCTGCCGGCGGAGGGCTTGATTTTGATATGTCGTCTCGTGGA
TCGAGGAGCTTTGGATTTGGATTTGGAAGCAATGGCTCACGTGGTGGGGCTTCTTGGAAGTCTGGTGATTGGATTTGTTCCAGGTCAGGGTGCAACGTACATAACTTCGC
AAGTAGAATGGAATGTTTCAGATGCAACGCTCCAAGAGACCCATTCTAA
Protein sequenceShow/hide protein sequence
MNRPGDWNCRSCQHLNFQRRECCQRCGESKFGAEFGVFGGRGRSIPSSYGGIASPGSDVRPGDWYCGVGNCGTHNFANRSSCFACGAFKDESAAAAAAGGGLDFDMSSRG
SRSFGFGFGSNGSRGGASWKSGDWICSRSGCNVHNFASRMECFRCNAPRDPF