; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0017396 (gene) of Snake gourd v1 genome

Gene IDTan0017396
OrganismTrichosanthes anguina (Snake gourd v1)
Descriptionserine/arginine-rich SC35-like splicing factor SCL30
Genome locationLG04:2506328..2511195
RNA-Seq ExpressionTan0017396
SyntenyTan0017396
Gene Ontology termsGO:0003723 - RNA binding (molecular function)
InterPro domainsIPR000504 - RNA recognition motif domain
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR035979 - RNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7030730.1 Serine/arginine-rich SC35-like splicing factor SCL30, partial [Cucurbita argyrosperma subsp. argyrosperma]2.4e-13791.1Show/hide
Query:  MRRYSPPYHSPPRRGYGGRGRSPPGRGY---GGGGGGGGGYGRRREQAHGSLLVRNIPMDCRPEELRAPFERFGLVRDVYIPKDYYTGEPRGFAFVEFVD
        MRRYSPPYHSPPRRGYGGRGRSPPGRGY   GGGGGGGGGYGRRREQ+HGSLLVRNIPMDCRPEELRAPFERFGLVRDVYIPKDYYTG+PRGFAFVEFVD
Subjt:  MRRYSPPYHSPPRRGYGGRGRSPPGRGY---GGGGGGGGGYGRRREQAHGSLLVRNIPMDCRPEELRAPFERFGLVRDVYIPKDYYTGEPRGFAFVEFVD

Query:  PYEASEAQYHMNGKKFAGREITVVLAAESRKRPEQMRQRSRRGPSGYGGRRSYYGRSRSRSVSRSRSPHHPSGSRSRYRSRSYSPAPRWRGDYSVSPSRR
        PYEASEAQYHMNGKKFAGREITVVLAAESRKRPEQMRQRSRRGPSGYGGRRSYYGRSRSRSVSRSRSPH PSGS SRYRSRSYSPAPRWRG+YS+SP RR
Subjt:  PYEASEAQYHMNGKKFAGREITVVLAAESRKRPEQMRQRSRRGPSGYGGRRSYYGRSRSRSVSRSRSPHHPSGSRSRYRSRSYSPAPRWRGDYSVSPSRR

Query:  HADYPRSPRGAPRERDGERSQQVYSPGYDNADGHDHDGNGNGYHEKSAFEREDARANWRSSPGRRPSPPGRTSRSPSGSRSRSADPSPRHGR
        HADYPRSPRGAPRERDGERS QVYSPGYDNA GHDHD  GNGYH+K+AFE EDARA+WRSS       PGRTSRSPSGSRSRSAD SPRHGR
Subjt:  HADYPRSPRGAPRERDGERSQQVYSPGYDNADGHDHDGNGNGYHEKSAFEREDARANWRSSPGRRPSPPGRTSRSPSGSRSRSADPSPRHGR

XP_008461655.1 PREDICTED: serine/arginine-rich SC35-like splicing factor SCL30 [Cucumis melo]5.7e-13992.04Show/hide
Query:  MRRYSPPYHSPPRRGYGGRGRSPPGRGYGGGGGGGGGYGRRREQAHGSLLVRNIPMDCRPEELRAPFERFGLVRDVYIPKDYYTGEPRGFAFVEFVDPYE
        MRRYSPPYHSPPRRGYGGRGRSPPGRGYGGGGGGGGGYGRRREQ HGSLLVRNIPMDCRPEELRAPFERFGLVRDVYIPKDYYTGEPRGFAFVEFVDPYE
Subjt:  MRRYSPPYHSPPRRGYGGRGRSPPGRGYGGGGGGGGGYGRRREQAHGSLLVRNIPMDCRPEELRAPFERFGLVRDVYIPKDYYTGEPRGFAFVEFVDPYE

Query:  ASEAQYHMNGKKFAGREITVVLAAESRKRPEQMRQRSRRGPSGYGGRRSYYGRSRSRSVSRSRSPHHPSGSRSRYRSRSYSPAPRWRGDYSVSPSRRHAD
        ASEAQYHMNGKKFAGREITVVLAAESRKRPEQMRQRSRRGPSGYGGRRS+YGRSRSRSVSRSRSP HPSGSRSRYRSRSYSPAPRWRGDYSVSP RRHAD
Subjt:  ASEAQYHMNGKKFAGREITVVLAAESRKRPEQMRQRSRRGPSGYGGRRSYYGRSRSRSVSRSRSPHHPSGSRSRYRSRSYSPAPRWRGDYSVSPSRRHAD

Query:  YPRSPRGAPRERDGERSQQVYSPGYDNADGHDHDGNGNGYHEKSAFEREDARANWRSSPGRRPSPPGRTSRSPSGSRSRSADPSPRHGR
        YP SPRGAPRERD ERS+QVYSPGYDNAD  +HD NGNGYH+KS FE EDAR NWRSS       PGRTSRSPSGSRSRSAD SPRHGR
Subjt:  YPRSPRGAPRERDGERSQQVYSPGYDNADGHDHDGNGNGYHEKSAFEREDARANWRSSPGRRPSPPGRTSRSPSGSRSRSADPSPRHGR

XP_022139086.1 serine/arginine-rich SC35-like splicing factor SCL30 [Momordica charantia]1.8e-14595.16Show/hide
Query:  MRRYSPPYHSPPRRGYGGRGRSPPGRGYGGGGGGGGGYGRRREQAHGSLLVRNIPMDCRPEELRAPFERFGLVRDVYIPKDYYTGEPRGFAFVEFVDPYE
        MRRYSPPYHSPPRRGYGGRGRSPPGRGYGGGGGGGGGYGRRREQ+HGSLLVRNIPMDCRPEELRAPFERFGLVRDVYIPKDYY+GEPRGFAFVEFVDPYE
Subjt:  MRRYSPPYHSPPRRGYGGRGRSPPGRGYGGGGGGGGGYGRRREQAHGSLLVRNIPMDCRPEELRAPFERFGLVRDVYIPKDYYTGEPRGFAFVEFVDPYE

Query:  ASEAQYHMNGKKFAGREITVVLAAESRKRPEQMRQRSRRGPSGYGGRRSYYGRSRSRSVSRSRSPHHPSGSRSRYRSRSYSPAPRWRGDYSVSPSRRHAD
        ASEAQYHMNGKKFAGREITVVLAAESRKRPEQMRQRSRRGPSGYGGRRSYYGRSRSRSVSRSRSPHHPSGSRSRYRSRSYSPAPRWRGDYSVSPSRRHAD
Subjt:  ASEAQYHMNGKKFAGREITVVLAAESRKRPEQMRQRSRRGPSGYGGRRSYYGRSRSRSVSRSRSPHHPSGSRSRYRSRSYSPAPRWRGDYSVSPSRRHAD

Query:  YPRSPRGAPRERDGERSQQVYSPGYDNADGHDHDGNGNGYHEKSAFEREDARANWRSSPGRRPSPPGRTSRSPSGSRSRSADPSPRHGR
        YPRSPRGAP ERDGERSQQ YSPGYDNADGHDHD  GNGYH+KSAFE  D RANWRSSPGRR S PGR SRSPSGSRSRSAD SPRHGR
Subjt:  YPRSPRGAPRERDGERSQQVYSPGYDNADGHDHDGNGNGYHEKSAFEREDARANWRSSPGRRPSPPGRTSRSPSGSRSRSADPSPRHGR

XP_022987464.1 serine/arginine-rich SC35-like splicing factor SCL30 [Cucurbita maxima]1.1e-13791.1Show/hide
Query:  MRRYSPPYHSPPRRGYGGRGRSPPGRGY---GGGGGGGGGYGRRREQAHGSLLVRNIPMDCRPEELRAPFERFGLVRDVYIPKDYYTGEPRGFAFVEFVD
        MRRYSPPYHSPPRRGYGGRGRSPPGRGY   GGGGGGGGGYGRRREQ HGSLLVRNIPMDCRPEELRAPFERFGLVRDVYIPKDYYTG+PRGFAFVEFVD
Subjt:  MRRYSPPYHSPPRRGYGGRGRSPPGRGY---GGGGGGGGGYGRRREQAHGSLLVRNIPMDCRPEELRAPFERFGLVRDVYIPKDYYTGEPRGFAFVEFVD

Query:  PYEASEAQYHMNGKKFAGREITVVLAAESRKRPEQMRQRSRRGPSGYGGRRSYYGRSRSRSVSRSRSPHHPSGSRSRYRSRSYSPAPRWRGDYSVSPSRR
        PYEASEAQYHMNGKKFAGREI VVLAAESRKRPEQMRQRSRRGPS YGGRRSYYGRSRSRSVSRSRSP HPSGSRSR+RSRSYSPAPRWRGDYSVSPSRR
Subjt:  PYEASEAQYHMNGKKFAGREITVVLAAESRKRPEQMRQRSRRGPSGYGGRRSYYGRSRSRSVSRSRSPHHPSGSRSRYRSRSYSPAPRWRGDYSVSPSRR

Query:  HADYPRSPRGAPRERDGERSQQVYSPGYDNADGHDHDGNGNGYHEKSAFEREDARANWRSSPGRRPSPPGRTSRSPSGSRSRSADPSPRHGR
        HADYPRSPRGA RERDGERS+QVYSPGYDNADG D DGNGNGYH+K AFE EDARANWR S       P RTSRSPSGSRSRSAD SPRHGR
Subjt:  HADYPRSPRGAPRERDGERSQQVYSPGYDNADGHDHDGNGNGYHEKSAFEREDARANWRSSPGRRPSPPGRTSRSPSGSRSRSADPSPRHGR

XP_023549438.1 serine/arginine-rich SC35-like splicing factor SCL30 [Cucurbita pepo subsp. pepo]8.2e-13891.41Show/hide
Query:  MRRYSPPYHSPPRRGYGGRGRSPPGRGYGGGGGGGGGYGRRREQAHGSLLVRNIPMDCRPEELRAPFERFGLVRDVYIPKDYYTGEPRGFAFVEFVDPYE
        MRRYSPPYHSPPRRGYGGRGRSPPGRGYGGGGGGGGGYGRRREQ HGSLLVRNIPMDCRPEELRAPFERFGLVRDVYIPKDYYTG+PRGFAFVEFVDPYE
Subjt:  MRRYSPPYHSPPRRGYGGRGRSPPGRGYGGGGGGGGGYGRRREQAHGSLLVRNIPMDCRPEELRAPFERFGLVRDVYIPKDYYTGEPRGFAFVEFVDPYE

Query:  ASEAQYHMNGKKFAGREITVVLAAESRKRPEQMRQRSRRGPSGYGGRRSYYGRSRSRSVSRSRSPHHPSGSRSRYRSRSYSPAPRWRGDYSVSPSRRHAD
        ASEAQYHMNGKKFAGREI VVLAAESRKRPEQMRQRSRRGPS YGGRRSYYGRSRSRSVSRSRSP HPSGSRSR+RSRSYSPAPRWRGDYSVSPSRRHAD
Subjt:  ASEAQYHMNGKKFAGREITVVLAAESRKRPEQMRQRSRRGPSGYGGRRSYYGRSRSRSVSRSRSPHHPSGSRSRYRSRSYSPAPRWRGDYSVSPSRRHAD

Query:  YPRSPRGAPRERDGERSQQVYSPGYDNADGHDHD--GNGNGYHEKSAFEREDARANWRSSPGRRPSPPGRTSRSPSGSRSRSADPSPRHGR
        YPRSPRGA RERDGERS+QVYSPGYDNADG D D  GNGNGYH+K AFE EDARANWR S       P RTSRSPSGSRSRSAD SPRHGR
Subjt:  YPRSPRGAPRERDGERSQQVYSPGYDNADGHDHD--GNGNGYHEKSAFEREDARANWRSSPGRRPSPPGRTSRSPSGSRSRSADPSPRHGR

TrEMBL top hitse value%identityAlignment
A0A1S3CFP8 serine/arginine-rich SC35-like splicing factor SCL302.7e-13992.04Show/hide
Query:  MRRYSPPYHSPPRRGYGGRGRSPPGRGYGGGGGGGGGYGRRREQAHGSLLVRNIPMDCRPEELRAPFERFGLVRDVYIPKDYYTGEPRGFAFVEFVDPYE
        MRRYSPPYHSPPRRGYGGRGRSPPGRGYGGGGGGGGGYGRRREQ HGSLLVRNIPMDCRPEELRAPFERFGLVRDVYIPKDYYTGEPRGFAFVEFVDPYE
Subjt:  MRRYSPPYHSPPRRGYGGRGRSPPGRGYGGGGGGGGGYGRRREQAHGSLLVRNIPMDCRPEELRAPFERFGLVRDVYIPKDYYTGEPRGFAFVEFVDPYE

Query:  ASEAQYHMNGKKFAGREITVVLAAESRKRPEQMRQRSRRGPSGYGGRRSYYGRSRSRSVSRSRSPHHPSGSRSRYRSRSYSPAPRWRGDYSVSPSRRHAD
        ASEAQYHMNGKKFAGREITVVLAAESRKRPEQMRQRSRRGPSGYGGRRS+YGRSRSRSVSRSRSP HPSGSRSRYRSRSYSPAPRWRGDYSVSP RRHAD
Subjt:  ASEAQYHMNGKKFAGREITVVLAAESRKRPEQMRQRSRRGPSGYGGRRSYYGRSRSRSVSRSRSPHHPSGSRSRYRSRSYSPAPRWRGDYSVSPSRRHAD

Query:  YPRSPRGAPRERDGERSQQVYSPGYDNADGHDHDGNGNGYHEKSAFEREDARANWRSSPGRRPSPPGRTSRSPSGSRSRSADPSPRHGR
        YP SPRGAPRERD ERS+QVYSPGYDNAD  +HD NGNGYH+KS FE EDAR NWRSS       PGRTSRSPSGSRSRSAD SPRHGR
Subjt:  YPRSPRGAPRERDGERSQQVYSPGYDNADGHDHDGNGNGYHEKSAFEREDARANWRSSPGRRPSPPGRTSRSPSGSRSRSADPSPRHGR

A0A6J1CBL6 serine/arginine-rich SC35-like splicing factor SCL308.8e-14695.16Show/hide
Query:  MRRYSPPYHSPPRRGYGGRGRSPPGRGYGGGGGGGGGYGRRREQAHGSLLVRNIPMDCRPEELRAPFERFGLVRDVYIPKDYYTGEPRGFAFVEFVDPYE
        MRRYSPPYHSPPRRGYGGRGRSPPGRGYGGGGGGGGGYGRRREQ+HGSLLVRNIPMDCRPEELRAPFERFGLVRDVYIPKDYY+GEPRGFAFVEFVDPYE
Subjt:  MRRYSPPYHSPPRRGYGGRGRSPPGRGYGGGGGGGGGYGRRREQAHGSLLVRNIPMDCRPEELRAPFERFGLVRDVYIPKDYYTGEPRGFAFVEFVDPYE

Query:  ASEAQYHMNGKKFAGREITVVLAAESRKRPEQMRQRSRRGPSGYGGRRSYYGRSRSRSVSRSRSPHHPSGSRSRYRSRSYSPAPRWRGDYSVSPSRRHAD
        ASEAQYHMNGKKFAGREITVVLAAESRKRPEQMRQRSRRGPSGYGGRRSYYGRSRSRSVSRSRSPHHPSGSRSRYRSRSYSPAPRWRGDYSVSPSRRHAD
Subjt:  ASEAQYHMNGKKFAGREITVVLAAESRKRPEQMRQRSRRGPSGYGGRRSYYGRSRSRSVSRSRSPHHPSGSRSRYRSRSYSPAPRWRGDYSVSPSRRHAD

Query:  YPRSPRGAPRERDGERSQQVYSPGYDNADGHDHDGNGNGYHEKSAFEREDARANWRSSPGRRPSPPGRTSRSPSGSRSRSADPSPRHGR
        YPRSPRGAP ERDGERSQQ YSPGYDNADGHDHD  GNGYH+KSAFE  D RANWRSSPGRR S PGR SRSPSGSRSRSAD SPRHGR
Subjt:  YPRSPRGAPRERDGERSQQVYSPGYDNADGHDHDGNGNGYHEKSAFEREDARANWRSSPGRRPSPPGRTSRSPSGSRSRSADPSPRHGR

A0A6J1FWZ5 serine/arginine-rich SC35-like splicing factor SCL308.3e-13690.66Show/hide
Query:  MRRYSPPYHSPPRRGYGGRGRSPPGRGYGGGGGGGGGYGRRREQAHGSLLVRNIPMDCRPEELRAPFERFGLVRDVYIPKDYYTGEPRGFAFVEFVDPYE
        MRRYSPPYHSPPRRGYGGRGRSPPGRGY   GGGGGGYGR+REQ+HGSLLVRNIPMDCRPEELRAPFERFGLVRDVYIPKDYYTG+PRGFAFVEFVDPYE
Subjt:  MRRYSPPYHSPPRRGYGGRGRSPPGRGYGGGGGGGGGYGRRREQAHGSLLVRNIPMDCRPEELRAPFERFGLVRDVYIPKDYYTGEPRGFAFVEFVDPYE

Query:  ASEAQYHMNGKKFAGREITVVLAAESRKRPEQMRQRSRRGPSGYGGRRSYYGRSRSRSVSRSRSPHHPSGSRSRYRSRSYSPAPRWRGDYSVSPSRRHAD
        ASEAQYHMNGKKFAGREITVVLAAESRKRPEQMRQRSRRGPSGYGGRRSYYGRSRSRSVSRSRSPH PSGS SRYRSRSYSPAPRWRG+YS+SP RRHAD
Subjt:  ASEAQYHMNGKKFAGREITVVLAAESRKRPEQMRQRSRRGPSGYGGRRSYYGRSRSRSVSRSRSPHHPSGSRSRYRSRSYSPAPRWRGDYSVSPSRRHAD

Query:  YPRSPRGAPRERDGERSQQVYSPGYDNADGHDHDGNGNGYHEKSAFEREDARANWRSSPGRRPSPPGRTSRSPSGSRSRSADPSPRHGR
        YPRSPRGAPRERDGERS QVYSPGYDNA GHDHD  GNGYH+K AFE EDARA+WRSS       PGRTSRSPSGSRSRSAD SPRHGR
Subjt:  YPRSPRGAPRERDGERSQQVYSPGYDNADGHDHDGNGNGYHEKSAFEREDARANWRSSPGRRPSPPGRTSRSPSGSRSRSADPSPRHGR

A0A6J1H0N2 serine/arginine-rich SC35-like splicing factor SCL305.7e-13791Show/hide
Query:  MRRYSPPYHSPPRRGYGGRGRSPPGRGYGGGGGGGGGYGRRREQAHGSLLVRNIPMDCRPEELRAPFERFGLVRDVYIPKDYYTGEPRGFAFVEFVDPYE
        MRRYSPPYHSPPRRGYGGRGRSPPGRGY  GGGGGGGYGRRREQ HGSLLVRNIPMDCRPEELRAPFERFGLVRDVYIPKDYYTG+PRGFAFVEFVDPYE
Subjt:  MRRYSPPYHSPPRRGYGGRGRSPPGRGYGGGGGGGGGYGRRREQAHGSLLVRNIPMDCRPEELRAPFERFGLVRDVYIPKDYYTGEPRGFAFVEFVDPYE

Query:  ASEAQYHMNGKKFAGREITVVLAAESRKRPEQMRQRSRRGPSGYGGRRSYYGRSRSRSVSRSRSPHHPSGSRSRYRSRSYSPAPRWRGDYSVSPSRRHAD
        ASEAQYHMNGKKFAGREI VVLAAESRKRPEQMRQRSRRGPS YGGRRSYYGRSRSRSVSRSRSP HPSGSRSR+RSRSYSPAPRWRGDYSVSPSRRHAD
Subjt:  ASEAQYHMNGKKFAGREITVVLAAESRKRPEQMRQRSRRGPSGYGGRRSYYGRSRSRSVSRSRSPHHPSGSRSRYRSRSYSPAPRWRGDYSVSPSRRHAD

Query:  YPRSPRGAPRERDGERSQQVYSPGYDNADGHDHDGNGNGYHEKSAFEREDARANWRSSPGRRPSPPGRTSRSPSGSRSRSADPSPRHGR
        YPRSPRGA RERDGER++QVYSPGYDNADG D DGNGNGYH+K AFE EDARANWR S       P RTSRSPSGSRSRSAD SPRHGR
Subjt:  YPRSPRGAPRERDGERSQQVYSPGYDNADGHDHDGNGNGYHEKSAFEREDARANWRSSPGRRPSPPGRTSRSPSGSRSRSADPSPRHGR

A0A6J1JIZ1 serine/arginine-rich SC35-like splicing factor SCL305.2e-13891.1Show/hide
Query:  MRRYSPPYHSPPRRGYGGRGRSPPGRGY---GGGGGGGGGYGRRREQAHGSLLVRNIPMDCRPEELRAPFERFGLVRDVYIPKDYYTGEPRGFAFVEFVD
        MRRYSPPYHSPPRRGYGGRGRSPPGRGY   GGGGGGGGGYGRRREQ HGSLLVRNIPMDCRPEELRAPFERFGLVRDVYIPKDYYTG+PRGFAFVEFVD
Subjt:  MRRYSPPYHSPPRRGYGGRGRSPPGRGY---GGGGGGGGGYGRRREQAHGSLLVRNIPMDCRPEELRAPFERFGLVRDVYIPKDYYTGEPRGFAFVEFVD

Query:  PYEASEAQYHMNGKKFAGREITVVLAAESRKRPEQMRQRSRRGPSGYGGRRSYYGRSRSRSVSRSRSPHHPSGSRSRYRSRSYSPAPRWRGDYSVSPSRR
        PYEASEAQYHMNGKKFAGREI VVLAAESRKRPEQMRQRSRRGPS YGGRRSYYGRSRSRSVSRSRSP HPSGSRSR+RSRSYSPAPRWRGDYSVSPSRR
Subjt:  PYEASEAQYHMNGKKFAGREITVVLAAESRKRPEQMRQRSRRGPSGYGGRRSYYGRSRSRSVSRSRSPHHPSGSRSRYRSRSYSPAPRWRGDYSVSPSRR

Query:  HADYPRSPRGAPRERDGERSQQVYSPGYDNADGHDHDGNGNGYHEKSAFEREDARANWRSSPGRRPSPPGRTSRSPSGSRSRSADPSPRHGR
        HADYPRSPRGA RERDGERS+QVYSPGYDNADG D DGNGNGYH+K AFE EDARANWR S       P RTSRSPSGSRSRSAD SPRHGR
Subjt:  HADYPRSPRGAPRERDGERSQQVYSPGYDNADGHDHDGNGNGYHEKSAFEREDARANWRSSPGRRPSPPGRTSRSPSGSRSRSADPSPRHGR

SwissProt top hitse value%identityAlignment
Q1PDV2 Serine/arginine-rich SC35-like splicing factor SCL282.9e-2139.47Show/hide
Query:  RRYS--PPYHSPP--RRGYGGR--GRSPPGRGYGGGGGGGGGYGRRREQAHGSLLVRNIPMDCRPEELRAPFERFGLVRDVYIPKDYYTGEPRGFAFVEF
        R YS  P   SPP  R+GY        P  R +   G  G             LL+RN+P+D RP +LR  FERFG ++D+Y+P++YYTGEPRGF FV++
Subjt:  RRYS--PPYHSPP--RRGYGGR--GRSPPGRGYGGGGGGGGGYGRRREQAHGSLLVRNIPMDCRPEELRAPFERFGLVRDVYIPKDYYTGEPRGFAFVEF

Query:  VDPYEASEAQYHMNGKKFAGREITVVLAAESRKRPEQMRQRSRRGPSGYGGRRSYYGRSRSRSVSRSRSPHHPSGSRSRYRSRSYSPAPRWRGDYSVSPS
            +A+EA   MN K   GREI +V A E+RK P++MR       +G  GR   Y R+  RS  R    H    SRSR   R  S   + R D   SP 
Subjt:  VDPYEASEAQYHMNGKKFAGREITVVLAAESRKRPEQMRQRSRRGPSGYGGRRSYYGRSRSRSVSRSRSPHHPSGSRSRYRSRSYSPAPRWRGDYSVSPS

Query:  RRHADYPRSPRGAPRERDGERSQQVYSP
        RR     RSP   PR     +S+   SP
Subjt:  RRHADYPRSPRGAPRERDGERSQQVYSP

Q8L3X8 Serine/arginine-rich SC35-like splicing factor SCL307.8e-7561.9Show/hide
Query:  MRRYSPPYHSPPRRGYGGRGRS----PPGRGYGGGGGGGGGYGRRREQAHGSLLVRNIPMDCRPEELRAPFERFGLVRDVYIPKDYYTGEPRGFAFVEFV
        MRRYSPPY+SPPRRGYGGRGRS    PP RGYGGGGGGGG    RR  +HGSLLVRNIP+DCRPEELR PFERFG VRDVYIP+DYY+G+PRGFAFVEFV
Subjt:  MRRYSPPYHSPPRRGYGGRGRS----PPGRGYGGGGGGGGGYGRRREQAHGSLLVRNIPMDCRPEELRAPFERFGLVRDVYIPKDYYTGEPRGFAFVEFV

Query:  DPYEASEAQYHMNGKKFAGREITVVLAAESRKRPEQMRQRSR-RGPSGYGGRRSYYGRSRSRSVSRSRSPHHPSGSRSRYRSRSYSPAPRWRGDYSVSPS
        D Y+A EAQ  MN + FAGREITVV+A+ESRKRPE+MR ++R R     G R   +GRSRSRS+SRSRSP  PS SRSRYRSRSYSPAPR RG       
Subjt:  DPYEASEAQYHMNGKKFAGREITVVLAAESRKRPEQMRQRSR-RGPSGYGGRRSYYGRSRSRSVSRSRSPHHPSGSRSRYRSRSYSPAPRWRGDYSVSPS

Query:  RRHADYPRSPRGAPRERDGERSQQVYSPGYDN--ADGHDHDGNG-NGYHEKSAFEREDARANWRSSPGRRPSPPGRTSRSPSGSRSRSADPSPR
                 PRG   E D   S++ YSPGY+   A   D D NG N   EK  +E ED R   R+            SRSPSGSRSRS + SPR
Subjt:  RRHADYPRSPRGAPRERDGERSQQVYSPGYDN--ADGHDHDGNG-NGYHEKSAFEREDARANWRSSPGRRPSPPGRTSRSPSGSRSRSADPSPR

Q9BRL6 Serine/arginine-rich splicing factor 84.7e-1939.68Show/hide
Query:  SLLVRNIPMDCRPEELRAPFERFGLVRDVYIPKDYYTGEPRGFAFVEFVDPYEASEAQYHMNGKKFAGREITVVLAAESRKRPEQMRQRSRRGPS---GY
        +L V N+     P+ LR  FE++G V DVYIP++ +T  PRGFAFV F D  +A +A+  M+G +  GRE+ V +A   R+   + RQ   RG S   GY
Subjt:  SLLVRNIPMDCRPEELRAPFERFGLVRDVYIPKDYYTGEPRGFAFVEFVDPYEASEAQYHMNGKKFAGREITVVLAAESRKRPEQMRQRSRRGPS---GY

Query:  GGR-RSYYGRSRS---RSVSRSRSPH-HPSGSRSRYRSRSYSPAPRWRGDYSVSPSRRHADYPRSPRGAPRERDGERSQQVY-SPGYDNADGHDHDGNGN
        G R RSY  RSRS   R  SRSR P    S SRSRYR   YS +P  R  YS       + Y RSP    R R+       Y S GY N+    +  + +
Subjt:  GGR-RSYYGRSRS---RSVSRSRSPH-HPSGSRSRYRSRSYSPAPRWRGDYSVSPSRRHADYPRSPRGAPRERDGERSQQVY-SPGYDNADGHDHDGNGN

Query:  GYHEKSAFEREDARANWRSSPGRRPSPPGRTSRSPSGSRSRSADPSP
          H KS        A+   S   R S     SRS S SRS S   SP
Subjt:  GYHEKSAFEREDARANWRSSPGRRPSPPGRTSRSPSGSRSRSADPSP

Q9LHP2 Serine/arginine-rich SC35-like splicing factor SCL30A4.8e-3241.58Show/hide
Query:  RRYSPPYHSPPRRGYGGRGRSPPGRGYGGGGGGGGGYGRRREQAHGSLLVRNIPMDCRPEELRAPFERFGLVRDVYIPKDYYTGEPRGFAFVEFVDPYEA
        R Y+P   SPP RGYG RGRSP  RG  GG         R      SLLVRN+  DCR E+LR PFE+FG V+D+Y+P+DYYTG+PRGF F++F+DP +A
Subjt:  RRYSPPYHSPPRRGYGGRGRSPPGRGYGGGGGGGGGYGRRREQAHGSLLVRNIPMDCRPEELRAPFERFGLVRDVYIPKDYYTGEPRGFAFVEFVDPYEA

Query:  SEAQYHMNGKKFAGREITVVLAAESRKRPEQMRQRSRRGPSGYGGRRSYYGRSRSRSVSRSRSPHHPSGSRSRYRSRSY-SPAPRWRGDYSVSPSRRHAD
        +EA++ M+G    GRE+TVV A E+RK+P +MR R R      GGR + +   R      SRSP    G RSR RSR Y SP  +     SVSP  R  +
Subjt:  SEAQYHMNGKKFAGREITVVLAAESRKRPEQMRQRSRRGPSGYGGRRSYYGRSRSRSVSRSRSPHHPSGSRSRYRSRSY-SPAPRWRGDYSVSPSRRHAD

Query:  YPRS-----PRGAPRERDGERSQQVYSPGYDNADGHDHDGNGNGYHEKSAFEREDARANWRSSPGRRPSPPGRTSRSPSGSRSRSADPSPR
          RS     P    R R G       SPG   +            H +S       R N      R  +P    S+SP   +SRS  P PR
Subjt:  YPRS-----PRGAPRERDGERSQQVYSPGYDNADGHDHDGNGNGYHEKSAFEREDARANWRSSPGRRPSPPGRTSRSPSGSRSRSADPSPR

Q9SEU4 Serine/arginine-rich SC35-like splicing factor SCL331.4e-3443.54Show/hide
Query:  RRYSPPYHSPPRRGYGGRGRSPPGRGYGGGGGGGGGYGRRREQAHGSLLVRNIPMDCRPEELRAPFERFGLVRDVYIPKDYYTGEPRGFAFVEFVDPYEA
        R Y+P   SPP RGYG RGRSP  R         G YG R      SLLVRN+  DCR E+LR  FE+FG V+D+Y+P+DYYTG+PRGF FV+F+DP +A
Subjt:  RRYSPPYHSPPRRGYGGRGRSPPGRGYGGGGGGGGGYGRRREQAHGSLLVRNIPMDCRPEELRAPFERFGLVRDVYIPKDYYTGEPRGFAFVEFVDPYEA

Query:  SEAQYHMNGKKFAGREITVVLAAESRKRPEQMRQRSRRGPSGYGGRRSYYGRSRSRSVSRSRSPHHPSGSRSRYRSRSYSPAPRWRGDYSVSPSRRHADY
        ++A++HM+G    GRE+TVV A E+RK+P +MR R R      GGR     R+  R  SRSRSP  P   RSR RS          GDY   P RRH  +
Subjt:  SEAQYHMNGKKFAGREITVVLAAESRKRPEQMRQRSRRGPSGYGGRRSYYGRSRSRSVSRSRSPHHPSGSRSRYRSRSYSPAPRWRGDYSVSPSRRHADY

Query:  PRSPRGAPRERDGERSQQVYSPGYDNADGHDHDGNGNGYHEKSAFEREDARANWRSSPGRRPSPPGRTSRSPSGSRSRSADP------SPRHGR
        PRS        DG RS    SP  D + G            +S         +   SP R  S   R SRSPS  R+RS  P      SPR  R
Subjt:  PRSPRGAPRERDGERSQQVYSPGYDNADGHDHDGNGNGYHEKSAFEREDARANWRSSPGRRPSPPGRTSRSPSGSRSRSADP------SPRHGR

Arabidopsis top hitse value%identityAlignment
AT1G55310.1 SC35-like splicing factor 339.6e-3643.54Show/hide
Query:  RRYSPPYHSPPRRGYGGRGRSPPGRGYGGGGGGGGGYGRRREQAHGSLLVRNIPMDCRPEELRAPFERFGLVRDVYIPKDYYTGEPRGFAFVEFVDPYEA
        R Y+P   SPP RGYG RGRSP  R         G YG R      SLLVRN+  DCR E+LR  FE+FG V+D+Y+P+DYYTG+PRGF FV+F+DP +A
Subjt:  RRYSPPYHSPPRRGYGGRGRSPPGRGYGGGGGGGGGYGRRREQAHGSLLVRNIPMDCRPEELRAPFERFGLVRDVYIPKDYYTGEPRGFAFVEFVDPYEA

Query:  SEAQYHMNGKKFAGREITVVLAAESRKRPEQMRQRSRRGPSGYGGRRSYYGRSRSRSVSRSRSPHHPSGSRSRYRSRSYSPAPRWRGDYSVSPSRRHADY
        ++A++HM+G    GRE+TVV A E+RK+P +MR R R      GGR     R+  R  SRSRSP  P   RSR RS          GDY   P RRH  +
Subjt:  SEAQYHMNGKKFAGREITVVLAAESRKRPEQMRQRSRRGPSGYGGRRSYYGRSRSRSVSRSRSPHHPSGSRSRYRSRSYSPAPRWRGDYSVSPSRRHADY

Query:  PRSPRGAPRERDGERSQQVYSPGYDNADGHDHDGNGNGYHEKSAFEREDARANWRSSPGRRPSPPGRTSRSPSGSRSRSADP------SPRHGR
        PRS        DG RS    SP  D + G            +S         +   SP R  S   R SRSPS  R+RS  P      SPR  R
Subjt:  PRSPRGAPRERDGERSQQVYSPGYDNADGHDHDGNGNGYHEKSAFEREDARANWRSSPGRRPSPPGRTSRSPSGSRSRSADP------SPRHGR

AT1G55310.2 SC35-like splicing factor 334.3e-3648.18Show/hide
Query:  RRYSPPYHSPPRRGYGGRGRSPPGRGYGGGGGGGGGYGRRREQAHGSLLVRNIPMDCRPEELRAPFERFGLVRDVYIPKDYYTGEPRGFAFVEFVDPYEA
        R Y+P   SPP RGYG RGRSP  R         G YG R      SLLVRN+  DCR E+LR  FE+FG V+D+Y+P+DYYTG+PRGF FV+F+DP +A
Subjt:  RRYSPPYHSPPRRGYGGRGRSPPGRGYGGGGGGGGGYGRRREQAHGSLLVRNIPMDCRPEELRAPFERFGLVRDVYIPKDYYTGEPRGFAFVEFVDPYEA

Query:  SEAQYHMNGKKFAGREITVVLAAESRKRPEQMRQRSRRGPSGYGGRRSYYGRSRSRSVSRSRSPHHPSGSRSRYRSRS-YSPAPRWRGDYSVSPSRRHAD
        ++A++HM+G    GRE+TVV A E+RK+P +MR R R      GGR     R+  R  SRSRSP  P   RSR RS   YSP PR     S+SP     D
Subjt:  SEAQYHMNGKKFAGREITVVLAAESRKRPEQMRQRSRRGPSGYGGRRSYYGRSRSRSVSRSRSPHHPSGSRSRYRSRS-YSPAPRWRGDYSVSPSRRHAD

Query:  YPRSPRGAPRERDGERSQQV
          RS   +P   DG R + +
Subjt:  YPRSPRGAPRERDGERSQQV

AT1G55310.3 SC35-like splicing factor 332.4e-3442.16Show/hide
Query:  RRYSPPYHSPPRRGYGGRGRSPPGRGYGGGGGGGGGYGRRREQAHGSLLVRNIPMDCRPEELRAPFERFGLVRDVYIPKDYYTG------------EPRG
        R Y+P   SPP RGYG RGRSP  R         G YG R      SLLVRN+  DCR E+LR  FE+FG V+D+Y+P+DYYTG            +PRG
Subjt:  RRYSPPYHSPPRRGYGGRGRSPPGRGYGGGGGGGGGYGRRREQAHGSLLVRNIPMDCRPEELRAPFERFGLVRDVYIPKDYYTG------------EPRG

Query:  FAFVEFVDPYEASEAQYHMNGKKFAGREITVVLAAESRKRPEQMRQRSRRGPSGYGGRRSYYGRSRSRSVSRSRSPHHPSGSRSRYRSRSYSPAPRWRGD
        F FV+F+DP +A++A++HM+G    GRE+TVV A E+RK+P +MR R R G S +  RR    R+  R  SRSRSP  P   RSR RS          GD
Subjt:  FAFVEFVDPYEASEAQYHMNGKKFAGREITVVLAAESRKRPEQMRQRSRRGPSGYGGRRSYYGRSRSRSVSRSRSPHHPSGSRSRYRSRSYSPAPRWRGD

Query:  YSVSPSRRHADYPRSPRGAPRERDGERSQQVYSPGYDNADGHDHDGNGNGYHEKSAFEREDARANWRSSPGRRPSPPGRTSRSPSGSRSRSADP------
        Y   P RRH  +PRS        DG RS    SP  D + G            +S         +   SP R  S   R SRSPS  R+RS  P      
Subjt:  YSVSPSRRHADYPRSPRGAPRERDGERSQQVYSPGYDNADGHDHDGNGNGYHEKSAFEREDARANWRSSPGRRPSPPGRTSRSPSGSRSRSADP------

Query:  SPRHGR
        SPR  R
Subjt:  SPRHGR

AT3G13570.1 SC35-like splicing factor 30A3.4e-3341.58Show/hide
Query:  RRYSPPYHSPPRRGYGGRGRSPPGRGYGGGGGGGGGYGRRREQAHGSLLVRNIPMDCRPEELRAPFERFGLVRDVYIPKDYYTGEPRGFAFVEFVDPYEA
        R Y+P   SPP RGYG RGRSP  RG  GG         R      SLLVRN+  DCR E+LR PFE+FG V+D+Y+P+DYYTG+PRGF F++F+DP +A
Subjt:  RRYSPPYHSPPRRGYGGRGRSPPGRGYGGGGGGGGGYGRRREQAHGSLLVRNIPMDCRPEELRAPFERFGLVRDVYIPKDYYTGEPRGFAFVEFVDPYEA

Query:  SEAQYHMNGKKFAGREITVVLAAESRKRPEQMRQRSRRGPSGYGGRRSYYGRSRSRSVSRSRSPHHPSGSRSRYRSRSY-SPAPRWRGDYSVSPSRRHAD
        +EA++ M+G    GRE+TVV A E+RK+P +MR R R      GGR + +   R      SRSP    G RSR RSR Y SP  +     SVSP  R  +
Subjt:  SEAQYHMNGKKFAGREITVVLAAESRKRPEQMRQRSRRGPSGYGGRRSYYGRSRSRSVSRSRSPHHPSGSRSRYRSRSY-SPAPRWRGDYSVSPSRRHAD

Query:  YPRS-----PRGAPRERDGERSQQVYSPGYDNADGHDHDGNGNGYHEKSAFEREDARANWRSSPGRRPSPPGRTSRSPSGSRSRSADPSPR
          RS     P    R R G       SPG   +            H +S       R N      R  +P    S+SP   +SRS  P PR
Subjt:  YPRS-----PRGAPRERDGERSQQVYSPGYDNADGHDHDGNGNGYHEKSAFEREDARANWRSSPGRRPSPPGRTSRSPSGSRSRSADPSPR

AT3G55460.1 SC35-like splicing factor 305.6e-7661.9Show/hide
Query:  MRRYSPPYHSPPRRGYGGRGRS----PPGRGYGGGGGGGGGYGRRREQAHGSLLVRNIPMDCRPEELRAPFERFGLVRDVYIPKDYYTGEPRGFAFVEFV
        MRRYSPPY+SPPRRGYGGRGRS    PP RGYGGGGGGGG    RR  +HGSLLVRNIP+DCRPEELR PFERFG VRDVYIP+DYY+G+PRGFAFVEFV
Subjt:  MRRYSPPYHSPPRRGYGGRGRS----PPGRGYGGGGGGGGGYGRRREQAHGSLLVRNIPMDCRPEELRAPFERFGLVRDVYIPKDYYTGEPRGFAFVEFV

Query:  DPYEASEAQYHMNGKKFAGREITVVLAAESRKRPEQMRQRSR-RGPSGYGGRRSYYGRSRSRSVSRSRSPHHPSGSRSRYRSRSYSPAPRWRGDYSVSPS
        D Y+A EAQ  MN + FAGREITVV+A+ESRKRPE+MR ++R R     G R   +GRSRSRS+SRSRSP  PS SRSRYRSRSYSPAPR RG       
Subjt:  DPYEASEAQYHMNGKKFAGREITVVLAAESRKRPEQMRQRSR-RGPSGYGGRRSYYGRSRSRSVSRSRSPHHPSGSRSRYRSRSYSPAPRWRGDYSVSPS

Query:  RRHADYPRSPRGAPRERDGERSQQVYSPGYDN--ADGHDHDGNG-NGYHEKSAFEREDARANWRSSPGRRPSPPGRTSRSPSGSRSRSADPSPR
                 PRG   E D   S++ YSPGY+   A   D D NG N   EK  +E ED R   R+            SRSPSGSRSRS + SPR
Subjt:  RRHADYPRSPRGAPRERDGERSQQVYSPGYDN--ADGHDHDGNG-NGYHEKSAFEREDARANWRSSPGRRPSPPGRTSRSPSGSRSRSADPSPR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGAAGATACAGTCCACCATATCATAGTCCTCCGAGGAGAGGATATGGCGGTCGAGGAAGAAGCCCCCCAGGAAGGGGTTATGGTGGTGGTGGTGGTGGTGGTGGGGG
GTATGGAAGACGAAGGGAACAGGCTCATGGTAGCCTTTTGGTTAGAAATATTCCTATGGATTGCAGGCCAGAAGAGCTTAGAGCTCCATTTGAGAGGTTTGGACTTGTTC
GAGATGTGTATATTCCGAAAGATTATTACACAGGTGAACCACGAGGATTTGCATTTGTGGAGTTTGTCGATCCTTATGAGGCTTCTGAAGCTCAGTATCATATGAATGGG
AAAAAATTTGCGGGTAGGGAGATTACTGTGGTCCTTGCTGCAGAGTCAAGGAAGAGGCCAGAACAGATGCGCCAAAGGAGTAGAAGGGGACCATCTGGCTATGGTGGACG
TCGTTCTTATTATGGGCGTTCTAGATCTCGTTCAGTATCCCGATCACGCTCTCCCCATCATCCTTCAGGTTCAAGAAGTAGATATCGATCAAGGTCCTACTCTCCTGCTC
CAAGATGGCGGGGCGACTATTCTGTATCCCCCAGTAGACGGCATGCAGACTACCCTAGATCACCAAGAGGTGCTCCTCGTGAGCGAGATGGTGAGAGGAGTCAGCAAGTA
TATTCTCCAGGTTATGATAATGCTGATGGTCATGATCACGATGGAAATGGAAATGGATATCATGAAAAGTCTGCATTTGAAAGAGAGGATGCACGAGCTAACTGGAGGTC
TTCTCCTGGTAGAAGGCCGTCTCCTCCTGGTAGAACATCAAGATCCCCTTCAGGGTCCCGATCCCGCTCTGCCGATCCGTCACCAAGACACGGCAGATGA
mRNA sequenceShow/hide mRNA sequence
CGAAACACAGTAATAAAAGGCTAAACCCTACCATCGAAGTCTTCTTTCTCCCCAGACTTTACAGAAATCAGATCGAGGGAAGAATCTCTCCGTGCATCTTCTCATCTTCC
TTCTCTTTCCTTCAGGTTGAAACATGAGAAGATACAGTCCACCATATCATAGTCCTCCGAGGAGAGGATATGGCGGTCGAGGAAGAAGCCCCCCAGGAAGGGGTTATGGT
GGTGGTGGTGGTGGTGGTGGGGGGTATGGAAGACGAAGGGAACAGGCTCATGGTAGCCTTTTGGTTAGAAATATTCCTATGGATTGCAGGCCAGAAGAGCTTAGAGCTCC
ATTTGAGAGGTTTGGACTTGTTCGAGATGTGTATATTCCGAAAGATTATTACACAGGTGAACCACGAGGATTTGCATTTGTGGAGTTTGTCGATCCTTATGAGGCTTCTG
AAGCTCAGTATCATATGAATGGGAAAAAATTTGCGGGTAGGGAGATTACTGTGGTCCTTGCTGCAGAGTCAAGGAAGAGGCCAGAACAGATGCGCCAAAGGAGTAGAAGG
GGACCATCTGGCTATGGTGGACGTCGTTCTTATTATGGGCGTTCTAGATCTCGTTCAGTATCCCGATCACGCTCTCCCCATCATCCTTCAGGTTCAAGAAGTAGATATCG
ATCAAGGTCCTACTCTCCTGCTCCAAGATGGCGGGGCGACTATTCTGTATCCCCCAGTAGACGGCATGCAGACTACCCTAGATCACCAAGAGGTGCTCCTCGTGAGCGAG
ATGGTGAGAGGAGTCAGCAAGTATATTCTCCAGGTTATGATAATGCTGATGGTCATGATCACGATGGAAATGGAAATGGATATCATGAAAAGTCTGCATTTGAAAGAGAG
GATGCACGAGCTAACTGGAGGTCTTCTCCTGGTAGAAGGCCGTCTCCTCCTGGTAGAACATCAAGATCCCCTTCAGGGTCCCGATCCCGCTCTGCCGATCCGTCACCAAG
ACACGGCAGATGATTTTTCTAACCTTCGGTTCTAATATTTTACGTTTGTTACCCTTAAGTTAGAATCGACTATCCAGTAAAAATTCTAAGATTGTATTTTGTAAGATGGT
GTTCTTAGTGTTCGGGTTTTCAAGACATGGGCAATTTTCTTTGCTCTCATTTGCAGTTCAAAATTATTATGGTAGACCATCCAACCTGTTGCTACTTTTCTGGATTGTGC
ATGCTCTTCTTCTTCTTCATATATCTCATTCACGATATGTTATCGGTATTAAAATTTCTACCTTTCATTTGATGGTGC
Protein sequenceShow/hide protein sequence
MRRYSPPYHSPPRRGYGGRGRSPPGRGYGGGGGGGGGYGRRREQAHGSLLVRNIPMDCRPEELRAPFERFGLVRDVYIPKDYYTGEPRGFAFVEFVDPYEASEAQYHMNG
KKFAGREITVVLAAESRKRPEQMRQRSRRGPSGYGGRRSYYGRSRSRSVSRSRSPHHPSGSRSRYRSRSYSPAPRWRGDYSVSPSRRHADYPRSPRGAPRERDGERSQQV
YSPGYDNADGHDHDGNGNGYHEKSAFEREDARANWRSSPGRRPSPPGRTSRSPSGSRSRSADPSPRHGR