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Tan0017405 (gene) of Snake gourd v1 genome

Gene IDTan0017405
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionUnknown protein
Genome locationLG09:66863062..66863412
RNA-Seq ExpressionTan0017405
SyntenyTan0017405
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0050063.1 hypothetical protein E6C27_scaffold675G00440 [Cucumis melo var. makuwa]1.2e-3171.15Show/hide
Query:  KLAFVFLVCVAILGSPATARKVMAAEAPDPSVTGDFSLFPCISFVPEATKCVIDVLKNAVAPHPSCCKAISKLNDCSSEFLKDIPSNDMILIKSVCALWG
        KL  + LVC+AIL S  TAR  + A A    ++ DFSLFPCISFVP ATK VIDVLKNAVAPHPSCC+AIS+L+DCSS+FLKDIPS+DMIL+KS+CA WG
Subjt:  KLAFVFLVCVAILGSPATARKVMAAEAPDPSVTGDFSLFPCISFVPEATKCVIDVLKNAVAPHPSCCKAISKLNDCSSEFLKDIPSNDMILIKSVCALWG

Query:  VSIS
        VSIS
Subjt:  VSIS

KAA0050065.1 hypothetical protein E6C27_scaffold675G00460 [Cucumis melo var. makuwa]1.7e-3070.48Show/hide
Query:  KLAFVFLVCVAILGSPATARKV-MAAEAPDPSVTGDFSLFPCISFVPEATKCVIDVLKNAVAPHPSCCKAISKLNDCSSEFLKDIPSNDMILIKSVCALW
        KL    L C+ IL S   AR V +AA AP+    GD SLFPC SFVP+AT+CVIDVLKNAVAPHPSCC+AIS+L+DCSS+FLKDIPS DMIL+KS+CALW
Subjt:  KLAFVFLVCVAILGSPATARKV-MAAEAPDPSVTGDFSLFPCISFVPEATKCVIDVLKNAVAPHPSCCKAISKLNDCSSEFLKDIPSNDMILIKSVCALW

Query:  GVSIS
        GVSIS
Subjt:  GVSIS

KAA0050079.1 hypothetical protein E6C27_scaffold675G00630 [Cucumis melo var. makuwa]7.8e-3170.19Show/hide
Query:  KLAFVFLVCVAILGSPATARKVMAAEAPDPSVTGDFSLFPCISFVPEATKCVIDVLKNAVAPHPSCCKAISKLNDCSSEFLKDIPSNDMILIKSVCALWG
        KL  V  VC+AIL S  TA   + A A   S   DFSLFPCISFVP+ATKCVIDVLKN VAPHPSCC+AI++L+DCSS+FLKDIPS DMIL+KS+CA WG
Subjt:  KLAFVFLVCVAILGSPATARKVMAAEAPDPSVTGDFSLFPCISFVPEATKCVIDVLKNAVAPHPSCCKAISKLNDCSSEFLKDIPSNDMILIKSVCALWG

Query:  VSIS
        VSIS
Subjt:  VSIS

TYK10343.1 hypothetical protein E5676_scaffold367G00180 [Cucumis melo var. makuwa]3.9e-3070.48Show/hide
Query:  KLAFVFLVCVAILGSPATARKV-MAAEAPDPSVTGDFSLFPCISFVPEATKCVIDVLKNAVAPHPSCCKAISKLNDCSSEFLKDIPSNDMILIKSVCALW
        KL    L C+ IL S   AR V +AA AP     GD SLFPC SFVP+AT+CVIDVLKNAVAPHPSCC+AIS+L+DCSS+FLKDIPS DMIL+KS+CALW
Subjt:  KLAFVFLVCVAILGSPATARKV-MAAEAPDPSVTGDFSLFPCISFVPEATKCVIDVLKNAVAPHPSCCKAISKLNDCSSEFLKDIPSNDMILIKSVCALW

Query:  GVSIS
        GVSIS
Subjt:  GVSIS

TYK10345.1 hypothetical protein E5676_scaffold367G00210 [Cucumis melo var. makuwa]2.2e-3374.04Show/hide
Query:  KLAFVFLVCVAILGSPATARKVMAAEAPDPSVTGDFSLFPCISFVPEATKCVIDVLKNAVAPHPSCCKAISKLNDCSSEFLKDIPSNDMILIKSVCALWG
        KL  V LVC+AIL S  TAR  + A A   S   DFSLFPCISFVP+ATKCVIDVLKNAVAPHPSCC+AIS+L+DCSS+FLKDIPS+DMIL+KS+CA WG
Subjt:  KLAFVFLVCVAILGSPATARKVMAAEAPDPSVTGDFSLFPCISFVPEATKCVIDVLKNAVAPHPSCCKAISKLNDCSSEFLKDIPSNDMILIKSVCALWG

Query:  VSIS
        VSIS
Subjt:  VSIS

TrEMBL top hitse value%identityAlignment
A0A5A7U2D8 Uncharacterized protein5.8e-3271.15Show/hide
Query:  KLAFVFLVCVAILGSPATARKVMAAEAPDPSVTGDFSLFPCISFVPEATKCVIDVLKNAVAPHPSCCKAISKLNDCSSEFLKDIPSNDMILIKSVCALWG
        KL  + LVC+AIL S  TAR  + A A    ++ DFSLFPCISFVP ATK VIDVLKNAVAPHPSCC+AIS+L+DCSS+FLKDIPS+DMIL+KS+CA WG
Subjt:  KLAFVFLVCVAILGSPATARKVMAAEAPDPSVTGDFSLFPCISFVPEATKCVIDVLKNAVAPHPSCCKAISKLNDCSSEFLKDIPSNDMILIKSVCALWG

Query:  VSIS
        VSIS
Subjt:  VSIS

A0A5A7U8Y3 Uncharacterized protein8.4e-3170.48Show/hide
Query:  KLAFVFLVCVAILGSPATARKV-MAAEAPDPSVTGDFSLFPCISFVPEATKCVIDVLKNAVAPHPSCCKAISKLNDCSSEFLKDIPSNDMILIKSVCALW
        KL    L C+ IL S   AR V +AA AP+    GD SLFPC SFVP+AT+CVIDVLKNAVAPHPSCC+AIS+L+DCSS+FLKDIPS DMIL+KS+CALW
Subjt:  KLAFVFLVCVAILGSPATARKV-MAAEAPDPSVTGDFSLFPCISFVPEATKCVIDVLKNAVAPHPSCCKAISKLNDCSSEFLKDIPSNDMILIKSVCALW

Query:  GVSIS
        GVSIS
Subjt:  GVSIS

A0A5A7U9B0 Uncharacterized protein3.8e-3170.19Show/hide
Query:  KLAFVFLVCVAILGSPATARKVMAAEAPDPSVTGDFSLFPCISFVPEATKCVIDVLKNAVAPHPSCCKAISKLNDCSSEFLKDIPSNDMILIKSVCALWG
        KL  V  VC+AIL S  TA   + A A   S   DFSLFPCISFVP+ATKCVIDVLKN VAPHPSCC+AI++L+DCSS+FLKDIPS DMIL+KS+CA WG
Subjt:  KLAFVFLVCVAILGSPATARKVMAAEAPDPSVTGDFSLFPCISFVPEATKCVIDVLKNAVAPHPSCCKAISKLNDCSSEFLKDIPSNDMILIKSVCALWG

Query:  VSIS
        VSIS
Subjt:  VSIS

A0A5D3CEQ4 Uncharacterized protein1.9e-3070.48Show/hide
Query:  KLAFVFLVCVAILGSPATARKV-MAAEAPDPSVTGDFSLFPCISFVPEATKCVIDVLKNAVAPHPSCCKAISKLNDCSSEFLKDIPSNDMILIKSVCALW
        KL    L C+ IL S   AR V +AA AP     GD SLFPC SFVP+AT+CVIDVLKNAVAPHPSCC+AIS+L+DCSS+FLKDIPS DMIL+KS+CALW
Subjt:  KLAFVFLVCVAILGSPATARKV-MAAEAPDPSVTGDFSLFPCISFVPEATKCVIDVLKNAVAPHPSCCKAISKLNDCSSEFLKDIPSNDMILIKSVCALW

Query:  GVSIS
        GVSIS
Subjt:  GVSIS

A0A5D3CFS6 Uncharacterized protein1.1e-3374.04Show/hide
Query:  KLAFVFLVCVAILGSPATARKVMAAEAPDPSVTGDFSLFPCISFVPEATKCVIDVLKNAVAPHPSCCKAISKLNDCSSEFLKDIPSNDMILIKSVCALWG
        KL  V LVC+AIL S  TAR  + A A   S   DFSLFPCISFVP+ATKCVIDVLKNAVAPHPSCC+AIS+L+DCSS+FLKDIPS+DMIL+KS+CA WG
Subjt:  KLAFVFLVCVAILGSPATARKVMAAEAPDPSVTGDFSLFPCISFVPEATKCVIDVLKNAVAPHPSCCKAISKLNDCSSEFLKDIPSNDMILIKSVCALWG

Query:  VSIS
        VSIS
Subjt:  VSIS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGCGCAAAGTCACTGAAAGCGTTTGTTGGAATGAAGTTAGCATTTGTATTCCTAGTCTGCGTAGCTATTTTAGGCTCACCGGCGACAGCTCGTAAGGTGATGGCGGC
AGAAGCACCTGATCCGTCGGTAACTGGAGATTTTTCTTTGTTTCCCTGCATATCATTTGTTCCAGAGGCGACCAAATGCGTGATCGATGTATTAAAAAATGCGGTTGCCC
CTCATCCTTCTTGTTGCAAAGCTATTTCTAAGCTAAACGATTGTTCCTCCGAGTTTCTCAAAGACATACCTTCCAATGATATGATTTTGATTAAGAGTGTTTGTGCTCTG
TGGGGAGTTTCAATTTCATAG
mRNA sequenceShow/hide mRNA sequence
ATGGGCGCAAAGTCACTGAAAGCGTTTGTTGGAATGAAGTTAGCATTTGTATTCCTAGTCTGCGTAGCTATTTTAGGCTCACCGGCGACAGCTCGTAAGGTGATGGCGGC
AGAAGCACCTGATCCGTCGGTAACTGGAGATTTTTCTTTGTTTCCCTGCATATCATTTGTTCCAGAGGCGACCAAATGCGTGATCGATGTATTAAAAAATGCGGTTGCCC
CTCATCCTTCTTGTTGCAAAGCTATTTCTAAGCTAAACGATTGTTCCTCCGAGTTTCTCAAAGACATACCTTCCAATGATATGATTTTGATTAAGAGTGTTTGTGCTCTG
TGGGGAGTTTCAATTTCATAG
Protein sequenceShow/hide protein sequence
MGAKSLKAFVGMKLAFVFLVCVAILGSPATARKVMAAEAPDPSVTGDFSLFPCISFVPEATKCVIDVLKNAVAPHPSCCKAISKLNDCSSEFLKDIPSNDMILIKSVCAL
WGVSIS