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Tan0017426 (gene) of Snake gourd v1 genome

Gene IDTan0017426
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionUnknown protein
Genome locationLG11:15706559..15706957
RNA-Seq ExpressionTan0017426
SyntenyTan0017426
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_038888098.1 uncharacterized protein LOC120078004 [Benincasa hispida]1.1e-0736.84Show/hide
Query:  TGIVVSITITLEEFRSEVYDVKSINEYEYEIEMKIKFNTDYFSPPMYISNDQDVRFFMNHPDVTRVQVWITNVQNKCTNDGSKEDDDSGQDPEYE
        TGIVV IT+  +EF++ +Y V ++N  E+++ M++K+  D+ +PP+YI ND DV  F+   D++RVQ+++T +++    +     D  G D +YE
Subjt:  TGIVVSITITLEEFRSEVYDVKSINEYEYEIEMKIKFNTDYFSPPMYISNDQDVRFFMNHPDVTRVQVWITNVQNKCTNDGSKEDDDSGQDPEYE

XP_038891938.1 uncharacterized protein LOC120081277 isoform X1 [Benincasa hispida]5.4e-0429.36Show/hide
Query:  GIVVSITITLEEFRSEVYDVKSINEYEYEIEMKIKFNTDYFSPPMYISNDQDVRFFMNHPDVTRVQVWITNVQNKCTN----DGSKEDDDSGQDPEYEPG
        GI+V +++  EE +S +Y V +++  E+++ +K+K+  +Y +PP YI ND  +RF +   D++R+Q+ +T   N   N      +   DD+  + +Y+  
Subjt:  GIVVSITITLEEFRSEVYDVKSINEYEYEIEMKIKFNTDYFSPPMYISNDQDVRFFMNHPDVTRVQVWITNVQNKCTN----DGSKEDDDSGQDPEYEPG

Query:  ---QDDEYD
           + +EYD
Subjt:  ---QDDEYD

XP_038891939.1 uncharacterized protein LOC120081277 isoform X2 [Benincasa hispida]5.4e-0429.36Show/hide
Query:  GIVVSITITLEEFRSEVYDVKSINEYEYEIEMKIKFNTDYFSPPMYISNDQDVRFFMNHPDVTRVQVWITNVQNKCTN----DGSKEDDDSGQDPEYEPG
        GI+V +++  EE +S +Y V +++  E+++ +K+K+  +Y +PP YI ND  +RF +   D++R+Q+ +T   N   N      +   DD+  + +Y+  
Subjt:  GIVVSITITLEEFRSEVYDVKSINEYEYEIEMKIKFNTDYFSPPMYISNDQDVRFFMNHPDVTRVQVWITNVQNKCTN----DGSKEDDDSGQDPEYEPG

Query:  ---QDDEYD
           + +EYD
Subjt:  ---QDDEYD

TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACTTATACCGAAGGGCAAATACCGGTATCGTGGTGTCGATAACGATTACACTTGAAGAATTTAGGTCTGAGGTTTACGATGTTAAATCAATTAACGAGTACGAATA
TGAAATTGAAATGAAAATTAAATTCAATACGGATTATTTCTCACCACCAATGTACATAAGTAACGATCAAGATGTTCGATTTTTTATGAACCATCCAGACGTGACAAGAG
TTCAAGTATGGATAACAAATGTACAAAATAAGTGCACGAACGACGGGTCGAAGGAAGATGATGATTCTGGTCAAGACCCAGAATACGAACCTGGGCAGGACGATGAATAT
GATACACATGAACGAGTTGAAGAGGATGTAATGGTAATAGAAAGCGATGAGTATGTTGAAGATGAGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGACTTATACCGAAGGGCAAATACCGGTATCGTGGTGTCGATAACGATTACACTTGAAGAATTTAGGTCTGAGGTTTACGATGTTAAATCAATTAACGAGTACGAATA
TGAAATTGAAATGAAAATTAAATTCAATACGGATTATTTCTCACCACCAATGTACATAAGTAACGATCAAGATGTTCGATTTTTTATGAACCATCCAGACGTGACAAGAG
TTCAAGTATGGATAACAAATGTACAAAATAAGTGCACGAACGACGGGTCGAAGGAAGATGATGATTCTGGTCAAGACCCAGAATACGAACCTGGGCAGGACGATGAATAT
GATACACATGAACGAGTTGAAGAGGATGTAATGGTAATAGAAAGCGATGAGTATGTTGAAGATGAGTAG
Protein sequenceShow/hide protein sequence
MDLYRRANTGIVVSITITLEEFRSEVYDVKSINEYEYEIEMKIKFNTDYFSPPMYISNDQDVRFFMNHPDVTRVQVWITNVQNKCTNDGSKEDDDSGQDPEYEPGQDDEY
DTHERVEEDVMVIESDEYVEDE