| GenBank top hits | e value | %identity | Alignment |
|---|
| KAA0031826.1 gag/pol protein [Cucumis melo var. makuwa] | 1.2e-262 | 52.18 | Show/hide |
Query: MNTILVVDDLRFVLTEDCPHIPARNAPQSVKKAYDRWIKANDKAKVYILASVSEVLAKKHEGMVSTREIMSSLQEMFGQPSGQIRHESLKYVYNSRMKEG
+NT+L++DDLRFVL E+CP +PA NA ++V++ Y+RW KAN+KA+ YILAS+SEVLAKKHE M++ REIM SLQEMFGQ S QI+H++LKY+YN+RM EG
Subjt: MNTILVVDDLRFVLTEDCPHIPARNAPQSVKKAYDRWIKANDKAKVYILASVSEVLAKKHEGMVSTREIMSSLQEMFGQPSGQIRHESLKYVYNSRMKEG
Query: SSVREHVLDLMVHFNVAEMNGAVIDEQSQVSFILESLSKSFLQFRSNAVMNKIEYNLTTLLNELQTFQSHMKNKGQADGEANLFSHSVRFRRVHPPGLSP
+SVREHVL++MVHFNVAEMNGAVIDE SQVSFILESL +SFLQFRSNAVMNKI Y LTTLLNELQTF+S MK KGQ GEAN+ + + +F R G
Subjt: SSVREHVLDLMVHFNVAEMNGAVIDEQSQVSFILESLSKSFLQFRSNAVMNKIEYNLTTLLNELQTFQSHMKNKGQADGEANLFSHSVRFRRVHPPGLSP
Query: RSSSSGLKKTQKKKIGGKGKAPAADKGKGKVKLADKGKCFHCNLNGHWKRNCPKYLAELKEKK-------------------------------------
SSSG KK +KKK G KA A K A KG CFHCN GHWKRNCPKYLAE K+ K
Subjt: RSSSSGLKKTQKKKIGGKGKAPAADKGKGKVKLADKGKCFHCNLNGHWKRNCPKYLAELKEKK-------------------------------------
Query: -------------------------------------------------------------ELGYYISFSINEAFILKESVNICSAKLKNGLYVLKLNKT
E Y ++F++N+ FI K V ICSAKL+N LYVL+ +
Subjt: -------------------------------------------------------------ELGYYISFSINEAFILKESVNICSAKLKNGLYVLKLNKT
Query: KTIFNHEMFKNANTQNKRQRISPNNNTYLWHLRLGYINLNRIERLSKNGLLNKLEDDSLPPCESCLDGKMTKRPFTGKGYRAIEPLELIHSDLCGSVNIK
K + N EMFK A TQNKR +ISP N +LWHLRLG+INLNRIERL KNGLL++LE++SLP CESCL+GKMTKRPFTGKG+RA EPLEL+HSDLCG +N+K
Subjt: KTIFNHEMFKNANTQNKRQRISPNNNTYLWHLRLGYINLNRIERLSKNGLLNKLEDDSLPPCESCLDGKMTKRPFTGKGYRAIEPLELIHSDLCGSVNIK
Query: ARGGYEYFISFIDDYS------------------------------------------------------------------------------------
ARGG+EYFI+F DDYS
Subjt: ARGGYEYFISFIDDYS------------------------------------------------------------------------------------
Query: ----------------------------------------------------RIWGCTTHVLMTNPKKLEPRSRLCQFVGYPKETKGGLFYDPEENKVIV
RIWGC HVL NPKKLEPRS+LC FVGYPK T+GG FYDP++NKV V
Subjt: ----------------------------------------------------RIWGCTTHVLMTNPKKLEPRSRLCQFVGYPKETKGGLFYDPEENKVIV
Query: STNATFLEEDHMRNHKPHSKLVLN----EATHEPTRVVDQARPSSRVDRGVNTSSQSRPSQSLGMSRRSGRVVSQPDRYFGLAETQVVIPDDGVEDPLPY
STNATFLEEDH+R HKP SK+VLN E T TRVV++ +RV V +S+++ QSL RRSGRV + P RY L ET VI D +EDPL +
Subjt: STNATFLEEDHMRNHKPHSKLVLN----EATHEPTRVVDQARPSSRVDRGVNTSSQSRPSQSLGMSRRSGRVVSQPDRYFGLAETQVVIPDDGVEDPLPY
Query: KQAMNDVDKDQWIKVMDLEMESVDFNSVWKLVDQSEGVRPIGCKWIYKRKRDAARKVQTFKARLVAKGFTQREGVDYEETFSPCISLKSIRILLSIVTFY
K+AM DVDKD+WIK M+LE+ES+ FNSVW LVDQ +GV+PIGCKWIYKRKR A KVQTFKARLVAKG+TQ EGVDYEETFSP LKSIRILLSI ++
Subjt: KQAMNDVDKDQWIKVMDLEMESVDFNSVWKLVDQSEGVRPIGCKWIYKRKRDAARKVQTFKARLVAKGFTQREGVDYEETFSPCISLKSIRILLSIVTFY
Query: DYEIWQMDVKIAFLNGNLDESIYMSQSEGFIARRQEKKVCKLNRSIYGLKQASTSWNIRFDTAIKSYGFDQNVDEPSVYNKIINE
DYEIWQMDVK AFLNGNL+E+IYM Q EGFI QE+K+CKLNRSIYGLKQAS SWNIRFDTAIKSYGFDQ VDEP VY +IIN+
Subjt: DYEIWQMDVKIAFLNGNLDESIYMSQSEGFIARRQEKKVCKLNRSIYGLKQASTSWNIRFDTAIKSYGFDQNVDEPSVYNKIINE
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| KAA0035879.1 gag/pol protein [Cucumis melo var. makuwa] | 1.2e-262 | 52.18 | Show/hide |
Query: MNTILVVDDLRFVLTEDCPHIPARNAPQSVKKAYDRWIKANDKAKVYILASVSEVLAKKHEGMVSTREIMSSLQEMFGQPSGQIRHESLKYVYNSRMKEG
+NT+L++DDLRFVL E+CP +PA NA ++V++ Y+RW KAN+KA+ YILAS+SEVLAKKHE M++ REIM SLQEMFGQ S QI+H++LKY+YN+RM EG
Subjt: MNTILVVDDLRFVLTEDCPHIPARNAPQSVKKAYDRWIKANDKAKVYILASVSEVLAKKHEGMVSTREIMSSLQEMFGQPSGQIRHESLKYVYNSRMKEG
Query: SSVREHVLDLMVHFNVAEMNGAVIDEQSQVSFILESLSKSFLQFRSNAVMNKIEYNLTTLLNELQTFQSHMKNKGQADGEANLFSHSVRFRRVHPPGLSP
+SVREHVL++MVHFNVAEMNGAVIDE SQVSFILESL +SFLQFRSNAVMNKI Y LTTLLNELQTF+S MK KGQ GEAN+ + + +F R G
Subjt: SSVREHVLDLMVHFNVAEMNGAVIDEQSQVSFILESLSKSFLQFRSNAVMNKIEYNLTTLLNELQTFQSHMKNKGQADGEANLFSHSVRFRRVHPPGLSP
Query: RSSSSGLKKTQKKKIGGKGKAPAADKGKGKVKLADKGKCFHCNLNGHWKRNCPKYLAELKEKK-------------------------------------
SSSG KK +KKK G KA A K A KG CFHCN GHWKRNCPKYLAE K+ K
Subjt: RSSSSGLKKTQKKKIGGKGKAPAADKGKGKVKLADKGKCFHCNLNGHWKRNCPKYLAELKEKK-------------------------------------
Query: -------------------------------------------------------------ELGYYISFSINEAFILKESVNICSAKLKNGLYVLKLNKT
E Y ++F++N+ FI K V ICSAKL+N LYVL+ +
Subjt: -------------------------------------------------------------ELGYYISFSINEAFILKESVNICSAKLKNGLYVLKLNKT
Query: KTIFNHEMFKNANTQNKRQRISPNNNTYLWHLRLGYINLNRIERLSKNGLLNKLEDDSLPPCESCLDGKMTKRPFTGKGYRAIEPLELIHSDLCGSVNIK
K + N EMFK A TQNKR +ISP N +LWHLRLG+INLNRIERL KNGLL++LE++SLP CESCL+GKMTKRPFTGKG+RA EPLEL+HSDLCG +N+K
Subjt: KTIFNHEMFKNANTQNKRQRISPNNNTYLWHLRLGYINLNRIERLSKNGLLNKLEDDSLPPCESCLDGKMTKRPFTGKGYRAIEPLELIHSDLCGSVNIK
Query: ARGGYEYFISFIDDYS------------------------------------------------------------------------------------
ARGG+EYFI+F DDYS
Subjt: ARGGYEYFISFIDDYS------------------------------------------------------------------------------------
Query: ----------------------------------------------------RIWGCTTHVLMTNPKKLEPRSRLCQFVGYPKETKGGLFYDPEENKVIV
RIWGC HVL NPKKLEPRS+LC FVGYPK T+GG FYDP++NKV V
Subjt: ----------------------------------------------------RIWGCTTHVLMTNPKKLEPRSRLCQFVGYPKETKGGLFYDPEENKVIV
Query: STNATFLEEDHMRNHKPHSKLVLN----EATHEPTRVVDQARPSSRVDRGVNTSSQSRPSQSLGMSRRSGRVVSQPDRYFGLAETQVVIPDDGVEDPLPY
STNATFLEEDH+R HKP SK+VLN E T TRVV++ +RV V +S+++ QSL RRSGRV + P RY L ET VI D +EDPL +
Subjt: STNATFLEEDHMRNHKPHSKLVLN----EATHEPTRVVDQARPSSRVDRGVNTSSQSRPSQSLGMSRRSGRVVSQPDRYFGLAETQVVIPDDGVEDPLPY
Query: KQAMNDVDKDQWIKVMDLEMESVDFNSVWKLVDQSEGVRPIGCKWIYKRKRDAARKVQTFKARLVAKGFTQREGVDYEETFSPCISLKSIRILLSIVTFY
K+AM DVDKD+WIK M+LE+ES+ FNSVW LVDQ +GV+PIGCKWIYKRKR A KVQTFKARLVAKG+TQ EGVDYEETFSP LKSIRILLSI ++
Subjt: KQAMNDVDKDQWIKVMDLEMESVDFNSVWKLVDQSEGVRPIGCKWIYKRKRDAARKVQTFKARLVAKGFTQREGVDYEETFSPCISLKSIRILLSIVTFY
Query: DYEIWQMDVKIAFLNGNLDESIYMSQSEGFIARRQEKKVCKLNRSIYGLKQASTSWNIRFDTAIKSYGFDQNVDEPSVYNKIINE
DYEIWQMDVK AFLNGNL+E+IYM Q EGFI QE+K+CKLNRSIYGLKQAS SWNIRFDTAIKSYGFDQ VDEP VY +IIN+
Subjt: DYEIWQMDVKIAFLNGNLDESIYMSQSEGFIARRQEKKVCKLNRSIYGLKQASTSWNIRFDTAIKSYGFDQNVDEPSVYNKIINE
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| KAA0047792.1 gag/pol protein [Cucumis melo var. makuwa] | 1.2e-262 | 52.18 | Show/hide |
Query: MNTILVVDDLRFVLTEDCPHIPARNAPQSVKKAYDRWIKANDKAKVYILASVSEVLAKKHEGMVSTREIMSSLQEMFGQPSGQIRHESLKYVYNSRMKEG
+NT+L++DDLRFVL E+CP +PA NA ++V++ Y+RW KAN+KA+ YILAS+SEVLAKKHE M++ REIM SLQEMFGQ S QI+H++LKY+YN+RM EG
Subjt: MNTILVVDDLRFVLTEDCPHIPARNAPQSVKKAYDRWIKANDKAKVYILASVSEVLAKKHEGMVSTREIMSSLQEMFGQPSGQIRHESLKYVYNSRMKEG
Query: SSVREHVLDLMVHFNVAEMNGAVIDEQSQVSFILESLSKSFLQFRSNAVMNKIEYNLTTLLNELQTFQSHMKNKGQADGEANLFSHSVRFRRVHPPGLSP
+SVREHVL++MVHFNVAEMNGAVIDE SQVSFILESL +SFLQFRSNAVMNKI Y LTTLLNELQTF+S MK KGQ GEAN+ + + +F R G
Subjt: SSVREHVLDLMVHFNVAEMNGAVIDEQSQVSFILESLSKSFLQFRSNAVMNKIEYNLTTLLNELQTFQSHMKNKGQADGEANLFSHSVRFRRVHPPGLSP
Query: RSSSSGLKKTQKKKIGGKGKAPAADKGKGKVKLADKGKCFHCNLNGHWKRNCPKYLAELKEKK-------------------------------------
SSSG KK +KKK G KA A K A KG CFHCN GHWKRNCPKYLAE K+ K
Subjt: RSSSSGLKKTQKKKIGGKGKAPAADKGKGKVKLADKGKCFHCNLNGHWKRNCPKYLAELKEKK-------------------------------------
Query: -------------------------------------------------------------ELGYYISFSINEAFILKESVNICSAKLKNGLYVLKLNKT
E Y ++F++N+ FI K V ICSAKL+N LYVL+ +
Subjt: -------------------------------------------------------------ELGYYISFSINEAFILKESVNICSAKLKNGLYVLKLNKT
Query: KTIFNHEMFKNANTQNKRQRISPNNNTYLWHLRLGYINLNRIERLSKNGLLNKLEDDSLPPCESCLDGKMTKRPFTGKGYRAIEPLELIHSDLCGSVNIK
K + N EMFK A TQNKR +ISP N +LWHLRLG+INLNRIERL KNGLL++LE++SLP CESCL+GKMTKRPFTGKG+RA EPLEL+HSDLCG +N+K
Subjt: KTIFNHEMFKNANTQNKRQRISPNNNTYLWHLRLGYINLNRIERLSKNGLLNKLEDDSLPPCESCLDGKMTKRPFTGKGYRAIEPLELIHSDLCGSVNIK
Query: ARGGYEYFISFIDDYS------------------------------------------------------------------------------------
ARGG+EYFI+F DDYS
Subjt: ARGGYEYFISFIDDYS------------------------------------------------------------------------------------
Query: ----------------------------------------------------RIWGCTTHVLMTNPKKLEPRSRLCQFVGYPKETKGGLFYDPEENKVIV
RIWGC HVL NPKKLEPRS+LC FVGYPK T+GG FYDP++NKV V
Subjt: ----------------------------------------------------RIWGCTTHVLMTNPKKLEPRSRLCQFVGYPKETKGGLFYDPEENKVIV
Query: STNATFLEEDHMRNHKPHSKLVLN----EATHEPTRVVDQARPSSRVDRGVNTSSQSRPSQSLGMSRRSGRVVSQPDRYFGLAETQVVIPDDGVEDPLPY
STNATFLEEDH+R HKP SK+VLN E T TRVV++ +RV V +S+++ QSL RRSGRV + P RY L ET VI D +EDPL +
Subjt: STNATFLEEDHMRNHKPHSKLVLN----EATHEPTRVVDQARPSSRVDRGVNTSSQSRPSQSLGMSRRSGRVVSQPDRYFGLAETQVVIPDDGVEDPLPY
Query: KQAMNDVDKDQWIKVMDLEMESVDFNSVWKLVDQSEGVRPIGCKWIYKRKRDAARKVQTFKARLVAKGFTQREGVDYEETFSPCISLKSIRILLSIVTFY
K+AM DVDKD+WIK M+LE+ES+ FNSVW LVDQ +GV+PIGCKWIYKRKR A KVQTFKARLVAKG+TQ EGVDYEETFSP LKSIRILLSI ++
Subjt: KQAMNDVDKDQWIKVMDLEMESVDFNSVWKLVDQSEGVRPIGCKWIYKRKRDAARKVQTFKARLVAKGFTQREGVDYEETFSPCISLKSIRILLSIVTFY
Query: DYEIWQMDVKIAFLNGNLDESIYMSQSEGFIARRQEKKVCKLNRSIYGLKQASTSWNIRFDTAIKSYGFDQNVDEPSVYNKIINE
DYEIWQMDVK AFLNGNL+E+IYM Q EGFI QE+K+CKLNRSIYGLKQAS SWNIRFDTAIKSYGFDQ VDEP VY +IIN+
Subjt: DYEIWQMDVKIAFLNGNLDESIYMSQSEGFIARRQEKKVCKLNRSIYGLKQASTSWNIRFDTAIKSYGFDQNVDEPSVYNKIINE
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| KAA0054490.1 gag/pol protein [Cucumis melo var. makuwa] | 1.2e-262 | 52.18 | Show/hide |
Query: MNTILVVDDLRFVLTEDCPHIPARNAPQSVKKAYDRWIKANDKAKVYILASVSEVLAKKHEGMVSTREIMSSLQEMFGQPSGQIRHESLKYVYNSRMKEG
+NT+L++DDLRFVL E+CP +PA NA ++V++ Y+RW KAN+KA+ YILAS+SEVLAKKHE M++ REIM SLQEMFGQ S QI+H++LKY+YN+RM EG
Subjt: MNTILVVDDLRFVLTEDCPHIPARNAPQSVKKAYDRWIKANDKAKVYILASVSEVLAKKHEGMVSTREIMSSLQEMFGQPSGQIRHESLKYVYNSRMKEG
Query: SSVREHVLDLMVHFNVAEMNGAVIDEQSQVSFILESLSKSFLQFRSNAVMNKIEYNLTTLLNELQTFQSHMKNKGQADGEANLFSHSVRFRRVHPPGLSP
+SVREHVL++MVHFNVAEMNGAVIDE SQVSFILESL +SFLQFRSNAVMNKI Y LTTLLNELQTF+S MK KGQ GEAN+ + + +F R G
Subjt: SSVREHVLDLMVHFNVAEMNGAVIDEQSQVSFILESLSKSFLQFRSNAVMNKIEYNLTTLLNELQTFQSHMKNKGQADGEANLFSHSVRFRRVHPPGLSP
Query: RSSSSGLKKTQKKKIGGKGKAPAADKGKGKVKLADKGKCFHCNLNGHWKRNCPKYLAELKEKK-------------------------------------
SSSG KK +KKK G KA A K A KG CFHCN GHWKRNCPKYLAE K+ K
Subjt: RSSSSGLKKTQKKKIGGKGKAPAADKGKGKVKLADKGKCFHCNLNGHWKRNCPKYLAELKEKK-------------------------------------
Query: -------------------------------------------------------------ELGYYISFSINEAFILKESVNICSAKLKNGLYVLKLNKT
E Y ++F++N+ FI K V ICSAKL+N LYVL+ +
Subjt: -------------------------------------------------------------ELGYYISFSINEAFILKESVNICSAKLKNGLYVLKLNKT
Query: KTIFNHEMFKNANTQNKRQRISPNNNTYLWHLRLGYINLNRIERLSKNGLLNKLEDDSLPPCESCLDGKMTKRPFTGKGYRAIEPLELIHSDLCGSVNIK
K + N EMFK A TQNKR +ISP N +LWHLRLG+INLNRIERL KNGLL++LE++SLP CESCL+GKMTKRPFTGKG+RA EPLEL+HSDLCG +N+K
Subjt: KTIFNHEMFKNANTQNKRQRISPNNNTYLWHLRLGYINLNRIERLSKNGLLNKLEDDSLPPCESCLDGKMTKRPFTGKGYRAIEPLELIHSDLCGSVNIK
Query: ARGGYEYFISFIDDYS------------------------------------------------------------------------------------
ARGG+EYFI+F DDYS
Subjt: ARGGYEYFISFIDDYS------------------------------------------------------------------------------------
Query: ----------------------------------------------------RIWGCTTHVLMTNPKKLEPRSRLCQFVGYPKETKGGLFYDPEENKVIV
RIWGC HVL NPKKLEPRS+LC FVGYPK T+GG FYDP++NKV V
Subjt: ----------------------------------------------------RIWGCTTHVLMTNPKKLEPRSRLCQFVGYPKETKGGLFYDPEENKVIV
Query: STNATFLEEDHMRNHKPHSKLVLN----EATHEPTRVVDQARPSSRVDRGVNTSSQSRPSQSLGMSRRSGRVVSQPDRYFGLAETQVVIPDDGVEDPLPY
STNATFLEEDH+R HKP SK+VLN E T TRVV++ +RV V +S+++ QSL RRSGRV + P RY L ET VI D +EDPL +
Subjt: STNATFLEEDHMRNHKPHSKLVLN----EATHEPTRVVDQARPSSRVDRGVNTSSQSRPSQSLGMSRRSGRVVSQPDRYFGLAETQVVIPDDGVEDPLPY
Query: KQAMNDVDKDQWIKVMDLEMESVDFNSVWKLVDQSEGVRPIGCKWIYKRKRDAARKVQTFKARLVAKGFTQREGVDYEETFSPCISLKSIRILLSIVTFY
K+AM DVDKD+WIK M+LE+ES+ FNSVW LVDQ +GV+PIGCKWIYKRKR A KVQTFKARLVAKG+TQ EGVDYEETFSP LKSIRILLSI ++
Subjt: KQAMNDVDKDQWIKVMDLEMESVDFNSVWKLVDQSEGVRPIGCKWIYKRKRDAARKVQTFKARLVAKGFTQREGVDYEETFSPCISLKSIRILLSIVTFY
Query: DYEIWQMDVKIAFLNGNLDESIYMSQSEGFIARRQEKKVCKLNRSIYGLKQASTSWNIRFDTAIKSYGFDQNVDEPSVYNKIINE
DYEIWQMDVK AFLNGNL+E+IYM Q EGFI QE+K+CKLNRSIYGLKQAS SWNIRFDTAIKSYGFDQ VDEP VY +IIN+
Subjt: DYEIWQMDVKIAFLNGNLDESIYMSQSEGFIARRQEKKVCKLNRSIYGLKQASTSWNIRFDTAIKSYGFDQNVDEPSVYNKIINE
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| TYK14550.1 gag/pol protein [Cucumis melo var. makuwa] | 1.2e-262 | 52.18 | Show/hide |
Query: MNTILVVDDLRFVLTEDCPHIPARNAPQSVKKAYDRWIKANDKAKVYILASVSEVLAKKHEGMVSTREIMSSLQEMFGQPSGQIRHESLKYVYNSRMKEG
+NT+L++DDLRFVL E+CP +PA NA ++V++ Y+RW KAN+KA+ YILAS+SEVLAKKHE M++ REIM SLQEMFGQ S QI+H++LKY+YN+RM EG
Subjt: MNTILVVDDLRFVLTEDCPHIPARNAPQSVKKAYDRWIKANDKAKVYILASVSEVLAKKHEGMVSTREIMSSLQEMFGQPSGQIRHESLKYVYNSRMKEG
Query: SSVREHVLDLMVHFNVAEMNGAVIDEQSQVSFILESLSKSFLQFRSNAVMNKIEYNLTTLLNELQTFQSHMKNKGQADGEANLFSHSVRFRRVHPPGLSP
+SVREHVL++MVHFNVAEMNGAVIDE SQVSFILESL +SFLQFRSNAVMNKI Y LTTLLNELQTF+S MK KGQ GEAN+ + + +F R G
Subjt: SSVREHVLDLMVHFNVAEMNGAVIDEQSQVSFILESLSKSFLQFRSNAVMNKIEYNLTTLLNELQTFQSHMKNKGQADGEANLFSHSVRFRRVHPPGLSP
Query: RSSSSGLKKTQKKKIGGKGKAPAADKGKGKVKLADKGKCFHCNLNGHWKRNCPKYLAELKEKK-------------------------------------
SSSG KK +KKK G KA A K A KG CFHCN GHWKRNCPKYLAE K+ K
Subjt: RSSSSGLKKTQKKKIGGKGKAPAADKGKGKVKLADKGKCFHCNLNGHWKRNCPKYLAELKEKK-------------------------------------
Query: -------------------------------------------------------------ELGYYISFSINEAFILKESVNICSAKLKNGLYVLKLNKT
E Y ++F++N+ FI K V ICSAKL+N LYVL+ +
Subjt: -------------------------------------------------------------ELGYYISFSINEAFILKESVNICSAKLKNGLYVLKLNKT
Query: KTIFNHEMFKNANTQNKRQRISPNNNTYLWHLRLGYINLNRIERLSKNGLLNKLEDDSLPPCESCLDGKMTKRPFTGKGYRAIEPLELIHSDLCGSVNIK
K + N EMFK A TQNKR +ISP N +LWHLRLG+INLNRIERL KNGLL++LE++SLP CESCL+GKMTKRPFTGKG+RA EPLEL+HSDLCG +N+K
Subjt: KTIFNHEMFKNANTQNKRQRISPNNNTYLWHLRLGYINLNRIERLSKNGLLNKLEDDSLPPCESCLDGKMTKRPFTGKGYRAIEPLELIHSDLCGSVNIK
Query: ARGGYEYFISFIDDYS------------------------------------------------------------------------------------
ARGG+EYFI+F DDYS
Subjt: ARGGYEYFISFIDDYS------------------------------------------------------------------------------------
Query: ----------------------------------------------------RIWGCTTHVLMTNPKKLEPRSRLCQFVGYPKETKGGLFYDPEENKVIV
RIWGC HVL NPKKLEPRS+LC FVGYPK T+GG FYDP++NKV V
Subjt: ----------------------------------------------------RIWGCTTHVLMTNPKKLEPRSRLCQFVGYPKETKGGLFYDPEENKVIV
Query: STNATFLEEDHMRNHKPHSKLVLN----EATHEPTRVVDQARPSSRVDRGVNTSSQSRPSQSLGMSRRSGRVVSQPDRYFGLAETQVVIPDDGVEDPLPY
STNATFLEEDH+R HKP SK+VLN E T TRVV++ +RV V +S+++ QSL RRSGRV + P RY L ET VI D +EDPL +
Subjt: STNATFLEEDHMRNHKPHSKLVLN----EATHEPTRVVDQARPSSRVDRGVNTSSQSRPSQSLGMSRRSGRVVSQPDRYFGLAETQVVIPDDGVEDPLPY
Query: KQAMNDVDKDQWIKVMDLEMESVDFNSVWKLVDQSEGVRPIGCKWIYKRKRDAARKVQTFKARLVAKGFTQREGVDYEETFSPCISLKSIRILLSIVTFY
K+AM DVDKD+WIK M+LE+ES+ FNSVW LVDQ +GV+PIGCKWIYKRKR A KVQTFKARLVAKG+TQ EGVDYEETFSP LKSIRILLSI ++
Subjt: KQAMNDVDKDQWIKVMDLEMESVDFNSVWKLVDQSEGVRPIGCKWIYKRKRDAARKVQTFKARLVAKGFTQREGVDYEETFSPCISLKSIRILLSIVTFY
Query: DYEIWQMDVKIAFLNGNLDESIYMSQSEGFIARRQEKKVCKLNRSIYGLKQASTSWNIRFDTAIKSYGFDQNVDEPSVYNKIINE
DYEIWQMDVK AFLNGNL+E+IYM Q EGFI QE+K+CKLNRSIYGLKQAS SWNIRFDTAIKSYGFDQ VDEP VY +IIN+
Subjt: DYEIWQMDVKIAFLNGNLDESIYMSQSEGFIARRQEKKVCKLNRSIYGLKQASTSWNIRFDTAIKSYGFDQNVDEPSVYNKIINE
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7SMH8 Gag/pol protein | 6.0e-263 | 52.18 | Show/hide |
Query: MNTILVVDDLRFVLTEDCPHIPARNAPQSVKKAYDRWIKANDKAKVYILASVSEVLAKKHEGMVSTREIMSSLQEMFGQPSGQIRHESLKYVYNSRMKEG
+NT+L++DDLRFVL E+CP +PA NA ++V++ Y+RW KAN+KA+ YILAS+SEVLAKKHE M++ REIM SLQEMFGQ S QI+H++LKY+YN+RM EG
Subjt: MNTILVVDDLRFVLTEDCPHIPARNAPQSVKKAYDRWIKANDKAKVYILASVSEVLAKKHEGMVSTREIMSSLQEMFGQPSGQIRHESLKYVYNSRMKEG
Query: SSVREHVLDLMVHFNVAEMNGAVIDEQSQVSFILESLSKSFLQFRSNAVMNKIEYNLTTLLNELQTFQSHMKNKGQADGEANLFSHSVRFRRVHPPGLSP
+SVREHVL++MVHFNVAEMNGAVIDE SQVSFILESL +SFLQFRSNAVMNKI Y LTTLLNELQTF+S MK KGQ GEAN+ + + +F R G
Subjt: SSVREHVLDLMVHFNVAEMNGAVIDEQSQVSFILESLSKSFLQFRSNAVMNKIEYNLTTLLNELQTFQSHMKNKGQADGEANLFSHSVRFRRVHPPGLSP
Query: RSSSSGLKKTQKKKIGGKGKAPAADKGKGKVKLADKGKCFHCNLNGHWKRNCPKYLAELKEKK-------------------------------------
SSSG KK +KKK G KA A K A KG CFHCN GHWKRNCPKYLAE K+ K
Subjt: RSSSSGLKKTQKKKIGGKGKAPAADKGKGKVKLADKGKCFHCNLNGHWKRNCPKYLAELKEKK-------------------------------------
Query: -------------------------------------------------------------ELGYYISFSINEAFILKESVNICSAKLKNGLYVLKLNKT
E Y ++F++N+ FI K V ICSAKL+N LYVL+ +
Subjt: -------------------------------------------------------------ELGYYISFSINEAFILKESVNICSAKLKNGLYVLKLNKT
Query: KTIFNHEMFKNANTQNKRQRISPNNNTYLWHLRLGYINLNRIERLSKNGLLNKLEDDSLPPCESCLDGKMTKRPFTGKGYRAIEPLELIHSDLCGSVNIK
K + N EMFK A TQNKR +ISP N +LWHLRLG+INLNRIERL KNGLL++LE++SLP CESCL+GKMTKRPFTGKG+RA EPLEL+HSDLCG +N+K
Subjt: KTIFNHEMFKNANTQNKRQRISPNNNTYLWHLRLGYINLNRIERLSKNGLLNKLEDDSLPPCESCLDGKMTKRPFTGKGYRAIEPLELIHSDLCGSVNIK
Query: ARGGYEYFISFIDDYS------------------------------------------------------------------------------------
ARGG+EYFI+F DDYS
Subjt: ARGGYEYFISFIDDYS------------------------------------------------------------------------------------
Query: ----------------------------------------------------RIWGCTTHVLMTNPKKLEPRSRLCQFVGYPKETKGGLFYDPEENKVIV
RIWGC HVL NPKKLEPRS+LC FVGYPK T+GG FYDP++NKV V
Subjt: ----------------------------------------------------RIWGCTTHVLMTNPKKLEPRSRLCQFVGYPKETKGGLFYDPEENKVIV
Query: STNATFLEEDHMRNHKPHSKLVLN----EATHEPTRVVDQARPSSRVDRGVNTSSQSRPSQSLGMSRRSGRVVSQPDRYFGLAETQVVIPDDGVEDPLPY
STNATFLEEDH+R HKP SK+VLN E T TRVV++ +RV V +S+++ QSL RRSGRV + P RY L ET VI D +EDPL +
Subjt: STNATFLEEDHMRNHKPHSKLVLN----EATHEPTRVVDQARPSSRVDRGVNTSSQSRPSQSLGMSRRSGRVVSQPDRYFGLAETQVVIPDDGVEDPLPY
Query: KQAMNDVDKDQWIKVMDLEMESVDFNSVWKLVDQSEGVRPIGCKWIYKRKRDAARKVQTFKARLVAKGFTQREGVDYEETFSPCISLKSIRILLSIVTFY
K+AM DVDKD+WIK M+LE+ES+ FNSVW LVDQ +GV+PIGCKWIYKRKR A KVQTFKARLVAKG+TQ EGVDYEETFSP LKSIRILLSI ++
Subjt: KQAMNDVDKDQWIKVMDLEMESVDFNSVWKLVDQSEGVRPIGCKWIYKRKRDAARKVQTFKARLVAKGFTQREGVDYEETFSPCISLKSIRILLSIVTFY
Query: DYEIWQMDVKIAFLNGNLDESIYMSQSEGFIARRQEKKVCKLNRSIYGLKQASTSWNIRFDTAIKSYGFDQNVDEPSVYNKIINE
DYEIWQMDVK AFLNGNL+E+IYM Q EGFI QE+K+CKLNRSIYGLKQAS SWNIRFDTAIKSYGFDQ VDEP VY +IIN+
Subjt: DYEIWQMDVKIAFLNGNLDESIYMSQSEGFIARRQEKKVCKLNRSIYGLKQASTSWNIRFDTAIKSYGFDQNVDEPSVYNKIINE
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| A0A5A7TWB9 Gag/pol protein | 6.0e-263 | 52.18 | Show/hide |
Query: MNTILVVDDLRFVLTEDCPHIPARNAPQSVKKAYDRWIKANDKAKVYILASVSEVLAKKHEGMVSTREIMSSLQEMFGQPSGQIRHESLKYVYNSRMKEG
+NT+L++DDLRFVL E+CP +PA NA ++V++ Y+RW KAN+KA+ YILAS+SEVLAKKHE M++ REIM SLQEMFGQ S QI+H++LKY+YN+RM EG
Subjt: MNTILVVDDLRFVLTEDCPHIPARNAPQSVKKAYDRWIKANDKAKVYILASVSEVLAKKHEGMVSTREIMSSLQEMFGQPSGQIRHESLKYVYNSRMKEG
Query: SSVREHVLDLMVHFNVAEMNGAVIDEQSQVSFILESLSKSFLQFRSNAVMNKIEYNLTTLLNELQTFQSHMKNKGQADGEANLFSHSVRFRRVHPPGLSP
+SVREHVL++MVHFNVAEMNGAVIDE SQVSFILESL +SFLQFRSNAVMNKI Y LTTLLNELQTF+S MK KGQ GEAN+ + + +F R G
Subjt: SSVREHVLDLMVHFNVAEMNGAVIDEQSQVSFILESLSKSFLQFRSNAVMNKIEYNLTTLLNELQTFQSHMKNKGQADGEANLFSHSVRFRRVHPPGLSP
Query: RSSSSGLKKTQKKKIGGKGKAPAADKGKGKVKLADKGKCFHCNLNGHWKRNCPKYLAELKEKK-------------------------------------
SSSG KK +KKK G KA A K A KG CFHCN GHWKRNCPKYLAE K+ K
Subjt: RSSSSGLKKTQKKKIGGKGKAPAADKGKGKVKLADKGKCFHCNLNGHWKRNCPKYLAELKEKK-------------------------------------
Query: -------------------------------------------------------------ELGYYISFSINEAFILKESVNICSAKLKNGLYVLKLNKT
E Y ++F++N+ FI K V ICSAKL+N LYVL+ +
Subjt: -------------------------------------------------------------ELGYYISFSINEAFILKESVNICSAKLKNGLYVLKLNKT
Query: KTIFNHEMFKNANTQNKRQRISPNNNTYLWHLRLGYINLNRIERLSKNGLLNKLEDDSLPPCESCLDGKMTKRPFTGKGYRAIEPLELIHSDLCGSVNIK
K + N EMFK A TQNKR +ISP N +LWHLRLG+INLNRIERL KNGLL++LE++SLP CESCL+GKMTKRPFTGKG+RA EPLEL+HSDLCG +N+K
Subjt: KTIFNHEMFKNANTQNKRQRISPNNNTYLWHLRLGYINLNRIERLSKNGLLNKLEDDSLPPCESCLDGKMTKRPFTGKGYRAIEPLELIHSDLCGSVNIK
Query: ARGGYEYFISFIDDYS------------------------------------------------------------------------------------
ARGG+EYFI+F DDYS
Subjt: ARGGYEYFISFIDDYS------------------------------------------------------------------------------------
Query: ----------------------------------------------------RIWGCTTHVLMTNPKKLEPRSRLCQFVGYPKETKGGLFYDPEENKVIV
RIWGC HVL NPKKLEPRS+LC FVGYPK T+GG FYDP++NKV V
Subjt: ----------------------------------------------------RIWGCTTHVLMTNPKKLEPRSRLCQFVGYPKETKGGLFYDPEENKVIV
Query: STNATFLEEDHMRNHKPHSKLVLN----EATHEPTRVVDQARPSSRVDRGVNTSSQSRPSQSLGMSRRSGRVVSQPDRYFGLAETQVVIPDDGVEDPLPY
STNATFLEEDH+R HKP SK+VLN E T TRVV++ +RV V +S+++ QSL RRSGRV + P RY L ET VI D +EDPL +
Subjt: STNATFLEEDHMRNHKPHSKLVLN----EATHEPTRVVDQARPSSRVDRGVNTSSQSRPSQSLGMSRRSGRVVSQPDRYFGLAETQVVIPDDGVEDPLPY
Query: KQAMNDVDKDQWIKVMDLEMESVDFNSVWKLVDQSEGVRPIGCKWIYKRKRDAARKVQTFKARLVAKGFTQREGVDYEETFSPCISLKSIRILLSIVTFY
K+AM DVDKD+WIK M+LE+ES+ FNSVW LVDQ +GV+PIGCKWIYKRKR A KVQTFKARLVAKG+TQ EGVDYEETFSP LKSIRILLSI ++
Subjt: KQAMNDVDKDQWIKVMDLEMESVDFNSVWKLVDQSEGVRPIGCKWIYKRKRDAARKVQTFKARLVAKGFTQREGVDYEETFSPCISLKSIRILLSIVTFY
Query: DYEIWQMDVKIAFLNGNLDESIYMSQSEGFIARRQEKKVCKLNRSIYGLKQASTSWNIRFDTAIKSYGFDQNVDEPSVYNKIINE
DYEIWQMDVK AFLNGNL+E+IYM Q EGFI QE+K+CKLNRSIYGLKQAS SWNIRFDTAIKSYGFDQ VDEP VY +IIN+
Subjt: DYEIWQMDVKIAFLNGNLDESIYMSQSEGFIARRQEKKVCKLNRSIYGLKQASTSWNIRFDTAIKSYGFDQNVDEPSVYNKIINE
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| A0A5A7UGV2 Gag/pol protein | 6.0e-263 | 52.18 | Show/hide |
Query: MNTILVVDDLRFVLTEDCPHIPARNAPQSVKKAYDRWIKANDKAKVYILASVSEVLAKKHEGMVSTREIMSSLQEMFGQPSGQIRHESLKYVYNSRMKEG
+NT+L++DDLRFVL E+CP +PA NA ++V++ Y+RW KAN+KA+ YILAS+SEVLAKKHE M++ REIM SLQEMFGQ S QI+H++LKY+YN+RM EG
Subjt: MNTILVVDDLRFVLTEDCPHIPARNAPQSVKKAYDRWIKANDKAKVYILASVSEVLAKKHEGMVSTREIMSSLQEMFGQPSGQIRHESLKYVYNSRMKEG
Query: SSVREHVLDLMVHFNVAEMNGAVIDEQSQVSFILESLSKSFLQFRSNAVMNKIEYNLTTLLNELQTFQSHMKNKGQADGEANLFSHSVRFRRVHPPGLSP
+SVREHVL++MVHFNVAEMNGAVIDE SQVSFILESL +SFLQFRSNAVMNKI Y LTTLLNELQTF+S MK KGQ GEAN+ + + +F R G
Subjt: SSVREHVLDLMVHFNVAEMNGAVIDEQSQVSFILESLSKSFLQFRSNAVMNKIEYNLTTLLNELQTFQSHMKNKGQADGEANLFSHSVRFRRVHPPGLSP
Query: RSSSSGLKKTQKKKIGGKGKAPAADKGKGKVKLADKGKCFHCNLNGHWKRNCPKYLAELKEKK-------------------------------------
SSSG KK +KKK G KA A K A KG CFHCN GHWKRNCPKYLAE K+ K
Subjt: RSSSSGLKKTQKKKIGGKGKAPAADKGKGKVKLADKGKCFHCNLNGHWKRNCPKYLAELKEKK-------------------------------------
Query: -------------------------------------------------------------ELGYYISFSINEAFILKESVNICSAKLKNGLYVLKLNKT
E Y ++F++N+ FI K V ICSAKL+N LYVL+ +
Subjt: -------------------------------------------------------------ELGYYISFSINEAFILKESVNICSAKLKNGLYVLKLNKT
Query: KTIFNHEMFKNANTQNKRQRISPNNNTYLWHLRLGYINLNRIERLSKNGLLNKLEDDSLPPCESCLDGKMTKRPFTGKGYRAIEPLELIHSDLCGSVNIK
K + N EMFK A TQNKR +ISP N +LWHLRLG+INLNRIERL KNGLL++LE++SLP CESCL+GKMTKRPFTGKG+RA EPLEL+HSDLCG +N+K
Subjt: KTIFNHEMFKNANTQNKRQRISPNNNTYLWHLRLGYINLNRIERLSKNGLLNKLEDDSLPPCESCLDGKMTKRPFTGKGYRAIEPLELIHSDLCGSVNIK
Query: ARGGYEYFISFIDDYS------------------------------------------------------------------------------------
ARGG+EYFI+F DDYS
Subjt: ARGGYEYFISFIDDYS------------------------------------------------------------------------------------
Query: ----------------------------------------------------RIWGCTTHVLMTNPKKLEPRSRLCQFVGYPKETKGGLFYDPEENKVIV
RIWGC HVL NPKKLEPRS+LC FVGYPK T+GG FYDP++NKV V
Subjt: ----------------------------------------------------RIWGCTTHVLMTNPKKLEPRSRLCQFVGYPKETKGGLFYDPEENKVIV
Query: STNATFLEEDHMRNHKPHSKLVLN----EATHEPTRVVDQARPSSRVDRGVNTSSQSRPSQSLGMSRRSGRVVSQPDRYFGLAETQVVIPDDGVEDPLPY
STNATFLEEDH+R HKP SK+VLN E T TRVV++ +RV V +S+++ QSL RRSGRV + P RY L ET VI D +EDPL +
Subjt: STNATFLEEDHMRNHKPHSKLVLN----EATHEPTRVVDQARPSSRVDRGVNTSSQSRPSQSLGMSRRSGRVVSQPDRYFGLAETQVVIPDDGVEDPLPY
Query: KQAMNDVDKDQWIKVMDLEMESVDFNSVWKLVDQSEGVRPIGCKWIYKRKRDAARKVQTFKARLVAKGFTQREGVDYEETFSPCISLKSIRILLSIVTFY
K+AM DVDKD+WIK M+LE+ES+ FNSVW LVDQ +GV+PIGCKWIYKRKR A KVQTFKARLVAKG+TQ EGVDYEETFSP LKSIRILLSI ++
Subjt: KQAMNDVDKDQWIKVMDLEMESVDFNSVWKLVDQSEGVRPIGCKWIYKRKRDAARKVQTFKARLVAKGFTQREGVDYEETFSPCISLKSIRILLSIVTFY
Query: DYEIWQMDVKIAFLNGNLDESIYMSQSEGFIARRQEKKVCKLNRSIYGLKQASTSWNIRFDTAIKSYGFDQNVDEPSVYNKIINE
DYEIWQMDVK AFLNGNL+E+IYM Q EGFI QE+K+CKLNRSIYGLKQAS SWNIRFDTAIKSYGFDQ VDEP VY +IIN+
Subjt: DYEIWQMDVKIAFLNGNLDESIYMSQSEGFIARRQEKKVCKLNRSIYGLKQASTSWNIRFDTAIKSYGFDQNVDEPSVYNKIINE
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| A0A5D3CPJ6 Gag/pol protein | 6.0e-263 | 52.18 | Show/hide |
Query: MNTILVVDDLRFVLTEDCPHIPARNAPQSVKKAYDRWIKANDKAKVYILASVSEVLAKKHEGMVSTREIMSSLQEMFGQPSGQIRHESLKYVYNSRMKEG
+NT+L++DDLRFVL E+CP +PA NA ++V++ Y+RW KAN+KA+ YILAS+SEVLAKKHE M++ REIM SLQEMFGQ S QI+H++LKY+YN+RM EG
Subjt: MNTILVVDDLRFVLTEDCPHIPARNAPQSVKKAYDRWIKANDKAKVYILASVSEVLAKKHEGMVSTREIMSSLQEMFGQPSGQIRHESLKYVYNSRMKEG
Query: SSVREHVLDLMVHFNVAEMNGAVIDEQSQVSFILESLSKSFLQFRSNAVMNKIEYNLTTLLNELQTFQSHMKNKGQADGEANLFSHSVRFRRVHPPGLSP
+SVREHVL++MVHFNVAEMNGAVIDE SQVSFILESL +SFLQFRSNAVMNKI Y LTTLLNELQTF+S MK KGQ GEAN+ + + +F R G
Subjt: SSVREHVLDLMVHFNVAEMNGAVIDEQSQVSFILESLSKSFLQFRSNAVMNKIEYNLTTLLNELQTFQSHMKNKGQADGEANLFSHSVRFRRVHPPGLSP
Query: RSSSSGLKKTQKKKIGGKGKAPAADKGKGKVKLADKGKCFHCNLNGHWKRNCPKYLAELKEKK-------------------------------------
SSSG KK +KKK G KA A K A KG CFHCN GHWKRNCPKYLAE K+ K
Subjt: RSSSSGLKKTQKKKIGGKGKAPAADKGKGKVKLADKGKCFHCNLNGHWKRNCPKYLAELKEKK-------------------------------------
Query: -------------------------------------------------------------ELGYYISFSINEAFILKESVNICSAKLKNGLYVLKLNKT
E Y ++F++N+ FI K V ICSAKL+N LYVL+ +
Subjt: -------------------------------------------------------------ELGYYISFSINEAFILKESVNICSAKLKNGLYVLKLNKT
Query: KTIFNHEMFKNANTQNKRQRISPNNNTYLWHLRLGYINLNRIERLSKNGLLNKLEDDSLPPCESCLDGKMTKRPFTGKGYRAIEPLELIHSDLCGSVNIK
K + N EMFK A TQNKR +ISP N +LWHLRLG+INLNRIERL KNGLL++LE++SLP CESCL+GKMTKRPFTGKG+RA EPLEL+HSDLCG +N+K
Subjt: KTIFNHEMFKNANTQNKRQRISPNNNTYLWHLRLGYINLNRIERLSKNGLLNKLEDDSLPPCESCLDGKMTKRPFTGKGYRAIEPLELIHSDLCGSVNIK
Query: ARGGYEYFISFIDDYS------------------------------------------------------------------------------------
ARGG+EYFI+F DDYS
Subjt: ARGGYEYFISFIDDYS------------------------------------------------------------------------------------
Query: ----------------------------------------------------RIWGCTTHVLMTNPKKLEPRSRLCQFVGYPKETKGGLFYDPEENKVIV
RIWGC HVL NPKKLEPRS+LC FVGYPK T+GG FYDP++NKV V
Subjt: ----------------------------------------------------RIWGCTTHVLMTNPKKLEPRSRLCQFVGYPKETKGGLFYDPEENKVIV
Query: STNATFLEEDHMRNHKPHSKLVLN----EATHEPTRVVDQARPSSRVDRGVNTSSQSRPSQSLGMSRRSGRVVSQPDRYFGLAETQVVIPDDGVEDPLPY
STNATFLEEDH+R HKP SK+VLN E T TRVV++ +RV V +S+++ QSL RRSGRV + P RY L ET VI D +EDPL +
Subjt: STNATFLEEDHMRNHKPHSKLVLN----EATHEPTRVVDQARPSSRVDRGVNTSSQSRPSQSLGMSRRSGRVVSQPDRYFGLAETQVVIPDDGVEDPLPY
Query: KQAMNDVDKDQWIKVMDLEMESVDFNSVWKLVDQSEGVRPIGCKWIYKRKRDAARKVQTFKARLVAKGFTQREGVDYEETFSPCISLKSIRILLSIVTFY
K+AM DVDKD+WIK M+LE+ES+ FNSVW LVDQ +GV+PIGCKWIYKRKR A KVQTFKARLVAKG+TQ EGVDYEETFSP LKSIRILLSI ++
Subjt: KQAMNDVDKDQWIKVMDLEMESVDFNSVWKLVDQSEGVRPIGCKWIYKRKRDAARKVQTFKARLVAKGFTQREGVDYEETFSPCISLKSIRILLSIVTFY
Query: DYEIWQMDVKIAFLNGNLDESIYMSQSEGFIARRQEKKVCKLNRSIYGLKQASTSWNIRFDTAIKSYGFDQNVDEPSVYNKIINE
DYEIWQMDVK AFLNGNL+E+IYM Q EGFI QE+K+CKLNRSIYGLKQAS SWNIRFDTAIKSYGFDQ VDEP VY +IIN+
Subjt: DYEIWQMDVKIAFLNGNLDESIYMSQSEGFIARRQEKKVCKLNRSIYGLKQASTSWNIRFDTAIKSYGFDQNVDEPSVYNKIINE
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| A0A5D3CSZ6 Gag/pol protein | 6.0e-263 | 52.18 | Show/hide |
Query: MNTILVVDDLRFVLTEDCPHIPARNAPQSVKKAYDRWIKANDKAKVYILASVSEVLAKKHEGMVSTREIMSSLQEMFGQPSGQIRHESLKYVYNSRMKEG
+NT+L++DDLRFVL E+CP +PA NA ++V++ Y+RW KAN+KA+ YILAS+SEVLAKKHE M++ REIM SLQEMFGQ S QI+H++LKY+YN+RM EG
Subjt: MNTILVVDDLRFVLTEDCPHIPARNAPQSVKKAYDRWIKANDKAKVYILASVSEVLAKKHEGMVSTREIMSSLQEMFGQPSGQIRHESLKYVYNSRMKEG
Query: SSVREHVLDLMVHFNVAEMNGAVIDEQSQVSFILESLSKSFLQFRSNAVMNKIEYNLTTLLNELQTFQSHMKNKGQADGEANLFSHSVRFRRVHPPGLSP
+SVREHVL++MVHFNVAEMNGAVIDE SQVSFILESL +SFLQFRSNAVMNKI Y LTTLLNELQTF+S MK KGQ GEAN+ + + +F R G
Subjt: SSVREHVLDLMVHFNVAEMNGAVIDEQSQVSFILESLSKSFLQFRSNAVMNKIEYNLTTLLNELQTFQSHMKNKGQADGEANLFSHSVRFRRVHPPGLSP
Query: RSSSSGLKKTQKKKIGGKGKAPAADKGKGKVKLADKGKCFHCNLNGHWKRNCPKYLAELKEKK-------------------------------------
SSSG KK +KKK G KA A K A KG CFHCN GHWKRNCPKYLAE K+ K
Subjt: RSSSSGLKKTQKKKIGGKGKAPAADKGKGKVKLADKGKCFHCNLNGHWKRNCPKYLAELKEKK-------------------------------------
Query: -------------------------------------------------------------ELGYYISFSINEAFILKESVNICSAKLKNGLYVLKLNKT
E Y ++F++N+ FI K V ICSAKL+N LYVL+ +
Subjt: -------------------------------------------------------------ELGYYISFSINEAFILKESVNICSAKLKNGLYVLKLNKT
Query: KTIFNHEMFKNANTQNKRQRISPNNNTYLWHLRLGYINLNRIERLSKNGLLNKLEDDSLPPCESCLDGKMTKRPFTGKGYRAIEPLELIHSDLCGSVNIK
K + N EMFK A TQNKR +ISP N +LWHLRLG+INLNRIERL KNGLL++LE++SLP CESCL+GKMTKRPFTGKG+RA EPLEL+HSDLCG +N+K
Subjt: KTIFNHEMFKNANTQNKRQRISPNNNTYLWHLRLGYINLNRIERLSKNGLLNKLEDDSLPPCESCLDGKMTKRPFTGKGYRAIEPLELIHSDLCGSVNIK
Query: ARGGYEYFISFIDDYS------------------------------------------------------------------------------------
ARGG+EYFI+F DDYS
Subjt: ARGGYEYFISFIDDYS------------------------------------------------------------------------------------
Query: ----------------------------------------------------RIWGCTTHVLMTNPKKLEPRSRLCQFVGYPKETKGGLFYDPEENKVIV
RIWGC HVL NPKKLEPRS+LC FVGYPK T+GG FYDP++NKV V
Subjt: ----------------------------------------------------RIWGCTTHVLMTNPKKLEPRSRLCQFVGYPKETKGGLFYDPEENKVIV
Query: STNATFLEEDHMRNHKPHSKLVLN----EATHEPTRVVDQARPSSRVDRGVNTSSQSRPSQSLGMSRRSGRVVSQPDRYFGLAETQVVIPDDGVEDPLPY
STNATFLEEDH+R HKP SK+VLN E T TRVV++ +RV V +S+++ QSL RRSGRV + P RY L ET VI D +EDPL +
Subjt: STNATFLEEDHMRNHKPHSKLVLN----EATHEPTRVVDQARPSSRVDRGVNTSSQSRPSQSLGMSRRSGRVVSQPDRYFGLAETQVVIPDDGVEDPLPY
Query: KQAMNDVDKDQWIKVMDLEMESVDFNSVWKLVDQSEGVRPIGCKWIYKRKRDAARKVQTFKARLVAKGFTQREGVDYEETFSPCISLKSIRILLSIVTFY
K+AM DVDKD+WIK M+LE+ES+ FNSVW LVDQ +GV+PIGCKWIYKRKR A KVQTFKARLVAKG+TQ EGVDYEETFSP LKSIRILLSI ++
Subjt: KQAMNDVDKDQWIKVMDLEMESVDFNSVWKLVDQSEGVRPIGCKWIYKRKRDAARKVQTFKARLVAKGFTQREGVDYEETFSPCISLKSIRILLSIVTFY
Query: DYEIWQMDVKIAFLNGNLDESIYMSQSEGFIARRQEKKVCKLNRSIYGLKQASTSWNIRFDTAIKSYGFDQNVDEPSVYNKIINE
DYEIWQMDVK AFLNGNL+E+IYM Q EGFI QE+K+CKLNRSIYGLKQAS SWNIRFDTAIKSYGFDQ VDEP VY +IIN+
Subjt: DYEIWQMDVKIAFLNGNLDESIYMSQSEGFIARRQEKKVCKLNRSIYGLKQASTSWNIRFDTAIKSYGFDQNVDEPSVYNKIINE
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| SwissProt top hits | e value | %identity | Alignment |
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| P04146 Copia protein | 2.0e-29 | 29.01 | Show/hide |
Query: QFVGYPKETKGGLFYDPEENKVIVSTNATFLEED-----HMRNHKPHSKLVLNEATHEPTRVVDQARPSSRVDRGVNTSSQSRPSQSLG-----------
QF+ KE++ F P +++ I+ T ++ +++ K +K LNE+ R D S+ N S +S ++ L
Subjt: QFVGYPKETKGGLFYDPEENKVIVSTNATFLEED-----HMRNHKPHSKLVLNEATHEPTRVVDQARPSSRVDRGVNTSSQSRPSQSLG-----------
Query: ----MSRRSGRVVSQPDRYFGLAE---TQVVIPDDGVEDPLP--YKQAMNDVDKDQWIKVMDLEMESVDFNSVWKLVDQSEGVRPIGCKWIYKRKRDAAR
++RRS R+ ++P + + +VV+ + + +P + + DK W + ++ E+ + N+ W + + E + +W++ K +
Subjt: ----MSRRSGRVVSQPDRYFGLAE---TQVVIPDDGVEDPLP--YKQAMNDVDKDQWIKVMDLEMESVDFNSVWKLVDQSEGVRPIGCKWIYKRKRDAAR
Query: KVQTFKARLVAKGFTQREGVDYEETFSPCISLKSIRILLSIVTFYDYEIWQMDVKIAFLNGNLDESIYMSQSEGFIARRQEKKVCKLNRSIYGLKQASTS
+KARLVA+GFTQ+ +DYEETF+P + S R +LS+V Y+ ++ QMDVK AFLNG L E IYM +G VCKLN++IYGLKQA+
Subjt: KVQTFKARLVAKGFTQREGVDYEETFSPCISLKSIRILLSIVTFYDYEIWQMDVKIAFLNGNLDESIYMSQSEGFIARRQEKKVCKLNRSIYGLKQASTS
Query: WNIRFDTAIKSYGFDQNVDEPSVY
W F+ A+K F + + +Y
Subjt: WNIRFDTAIKSYGFDQNVDEPSVY
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| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 7.2e-56 | 27.4 | Show/hide |
Query: LWHLRLGYINLNRIERLSKNGLLNKLEDDSLPPCESCLDGKMTKRPFTGKGYRAIEPLELIHSDLCGSVNIKARGGYEYFISFIDDYSR-----------
LWH R+G+++ ++ L+K L++ + ++ PC+ CL GK + F R + L+L++SD+CG + I++ GG +YF++FIDD SR
Subjt: LWHLRLGYINLNRIERLSKNGLLNKLEDDSLPPCESCLDGKMTKRPFTGKGYRAIEPLELIHSDLCGSVNIKARGGYEYFISFIDDYSR-----------
Query: ----------------------------------------------------------------------------------------------------
Subjt: ----------------------------------------------------------------------------------------------------
Query: --------------------------IWGCT--THVLMTNPKKLEPRSRLCQFVGYPKETKGGLFYDPEENKVIVSTNATFLEEDHMRNHKPHSKLVLN-
++GC HV KL+ +S C F+GY E G +DP + KVI S + F E +R S+ V N
Subjt: --------------------------IWGCT--THVLMTNPKKLEPRSRLCQFVGYPKETKGGLFYDPEENKVIVSTNATFLEEDHMRNHKPHSKLVLN-
Query: --------------------------EATHEPTRVVDQARPSSRVDRGV-NTSSQSRPSQSLGMSRRSGRVVSQPDRYFGLAETQVVIPDDGVEDPLPYK
E +P V++Q ++D GV ++ + RRS R + RY + V+I DD +P K
Subjt: --------------------------EATHEPTRVVDQARPSSRVDRGV-NTSSQSRPSQSLGMSRRSGRVVSQPDRYFGLAETQVVIPDDGVEDPLPYK
Query: QAMNDVDKDQWIKVMDLEMESVDFNSVWKLVDQSEGVRPIGCKWIYKRKRDAARKVQTFKARLVAKGFTQREGVDYEETFSPCISLKSIRILLSIVTFYD
+ ++ +K+Q +K M EMES+ N +KLV+ +G RP+ CKW++K K+D K+ +KARLV KGF Q++G+D++E FSP + + SIR +LS+ D
Subjt: QAMNDVDKDQWIKVMDLEMESVDFNSVWKLVDQSEGVRPIGCKWIYKRKRDAARKVQTFKARLVAKGFTQREGVDYEETFSPCISLKSIRILLSIVTFYD
Query: YEIWQMDVKIAFLNGNLDESIYMSQSEGFIARRQEKKVCKLNRSIYGLKQASTSWNIRFDTAIKSYGFDQNVDEPSVYNKIINE
E+ Q+DVK AFL+G+L+E IYM Q EGF ++ VCKLN+S+YGLKQA W ++FD+ +KS + + +P VY K +E
Subjt: YEIWQMDVKIAFLNGNLDESIYMSQSEGFIARRQEKKVCKLNRSIYGLKQASTSWNIRFDTAIKSYGFDQNVDEPSVYNKIINE
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| P92520 Uncharacterized mitochondrial protein AtMg00820 | 3.2e-11 | 37.65 | Show/hide |
Query: WIKVMDLEMESVDFNSVWKLVDQSEGVRPIGCKWIYKRKRDAARKVQTFKARLVAKGFTQREGVDYEETFSPCISLKSIRILLSI
W + M E++++ N W LV +GCKW++K K + + KARLVAKGF Q EG+ + ET+SP + +IR +L++
Subjt: WIKVMDLEMESVDFNSVWKLVDQSEGVRPIGCKWIYKRKRDAARKVQTFKARLVAKGFTQREGVDYEETFSPCISLKSIRILLSI
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| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 2.1e-31 | 35.22 | Show/hide |
Query: VNTSSQSRPSQSLGMSRRSGRVVSQPDRYFGLAETQVVIPDDGVEDPLPYKQAMNDVDKDQWIKVMDLEMESVDFNSVWKLVDQSEG-VRPIGCKWIYKR
VN ++Q+ P + M R+ + +P+ + LA + +P QA+ D ++W M E+ + N W LV V +GC+WI+ +
Subjt: VNTSSQSRPSQSLGMSRRSGRVVSQPDRYFGLAETQVVIPDDGVEDPLPYKQAMNDVDKDQWIKVMDLEMESVDFNSVWKLVDQSEG-VRPIGCKWIYKR
Query: KRDAARKVQTFKARLVAKGFTQREGVDYEETFSPCISLKSIRILLSIVTFYDYEIWQMDVKIAFLNGNLDESIYMSQSEGFIARRQEKKVCKLNRSIYGL
K ++ + +KARLVAKG+ QR G+DY ETFSP I SIRI+L + + I Q+DV AFL G L + +YMSQ GFI + + VCKL +++YGL
Subjt: KRDAARKVQTFKARLVAKGFTQREGVDYEETFSPCISLKSIRILLSIVTFYDYEIWQMDVKIAFLNGNLDESIYMSQSEGFIARRQEKKVCKLNRSIYGL
Query: KQASTSWNIRFDTAIKSYGFDQNVDEPSVY
KQA +W + + + GF +V + S++
Subjt: KQASTSWNIRFDTAIKSYGFDQNVDEPSVY
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| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 7.3e-32 | 35.14 | Show/hide |
Query: PSQSLGMSRRSGRVVSQPDRYFGLAETQVVIPDDGVEDPLPYKQAMNDVDKDQWIKVMDLEMESVDFNSVWKLV-DQSEGVRPIGCKWIYKRKRDAARKV
P + M+ R+ + +P++ + A + +P QAM D D+W + M E+ + N W LV V +GC+WI+ +K ++ +
Subjt: PSQSLGMSRRSGRVVSQPDRYFGLAETQVVIPDDGVEDPLPYKQAMNDVDKDQWIKVMDLEMESVDFNSVWKLV-DQSEGVRPIGCKWIYKRKRDAARKV
Query: QTFKARLVAKGFTQREGVDYEETFSPCISLKSIRILLSIVTFYDYEIWQMDVKIAFLNGNLDESIYMSQSEGFIARRQEKKVCKLNRSIYGLKQASTSWN
+KARLVAKG+ QR G+DY ETFSP I SIRI+L + + I Q+DV AFL G L + +YMSQ GF+ + + VC+L ++IYGLKQA +W
Subjt: QTFKARLVAKGFTQREGVDYEETFSPCISLKSIRILLSIVTFYDYEIWQMDVKIAFLNGNLDESIYMSQSEGFIARRQEKKVCKLNRSIYGLKQASTSWN
Query: IRFDTAIKSYGFDQNVDEPSVY
+ T + + GF ++ + S++
Subjt: IRFDTAIKSYGFDQNVDEPSVY
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