; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0017487 (gene) of Snake gourd v1 genome

Gene IDTan0017487
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionAlba domain-containing protein
Genome locationLG08:2015419..2017506
RNA-Seq ExpressionTan0017487
SyntenyTan0017487
Gene Ontology termsGO:0005634 - nucleus (cellular component)
GO:0003723 - RNA binding (molecular function)
InterPro domainsIPR002775 - DNA/RNA-binding protein Alba-like
IPR014560 - Uncharacterised conserved protein UCP030333, DNA/RNA-binding Alba-related
IPR036882 - Alba-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6599408.1 hypothetical protein SDJN03_09186, partial [Cucurbita argyrosperma subsp. sororia]6.1e-5692.37Show/hide
Query:  MEEIVEGVNSMNLGSDSFKKNRIQVSNTKKPLFFYVNLAKRYMQQHEEVELSALGMAIATVVTVAEILKNNGLAVEKKIATSTVDIKDDSRGRPVQKAKI
        MEEIVEGV+SMNLGSDS+KKNRIQVSNTKKPLFFYVNLAKRYMQQH+ VELSALGMAIATVVTVAEILKNNGLAVEKKI TSTVDIKDDSRGRPVQKAKI
Subjt:  MEEIVEGVNSMNLGSDSFKKNRIQVSNTKKPLFFYVNLAKRYMQQHEEVELSALGMAIATVVTVAEILKNNGLAVEKKIATSTVDIKDDSRGRPVQKAKI

Query:  EIVLGKTENFDAMMAAAAEERGEIGDADEQS
        EI+LGKTENFD +MAAAAEER E GDADEQS
Subjt:  EIVLGKTENFDAMMAAAAEERGEIGDADEQS

XP_004139317.1 uncharacterized protein At2g34160 [Cucumis sativus]1.9e-5793.89Show/hide
Query:  MEEIVEGVNSMNLGSDSFKKNRIQVSNTKKPLFFYVNLAKRYMQQHEEVELSALGMAIATVVTVAEILKNNGLAVEKKIATSTVDIKDDSRGRPVQKAKI
        MEEIVEGVNS+NL SDSFKKNRIQVSNTKKPLFFYVNLAKRYMQQH+EVELSALGMAIATVVTVAEILKNNGLA+EKKIATSTVDIKDDSRGRPVQKAKI
Subjt:  MEEIVEGVNSMNLGSDSFKKNRIQVSNTKKPLFFYVNLAKRYMQQHEEVELSALGMAIATVVTVAEILKNNGLAVEKKIATSTVDIKDDSRGRPVQKAKI

Query:  EIVLGKTENFDAMMAAAAEERGEIGDADEQS
        EI+LGKTENFD +MAAAAEERGEIG+ADEQS
Subjt:  EIVLGKTENFDAMMAAAAEERGEIGDADEQS

XP_008457716.1 PREDICTED: uncharacterized protein At2g34160-like [Cucumis melo]2.9e-5895.42Show/hide
Query:  MEEIVEGVNSMNLGSDSFKKNRIQVSNTKKPLFFYVNLAKRYMQQHEEVELSALGMAIATVVTVAEILKNNGLAVEKKIATSTVDIKDDSRGRPVQKAKI
        MEEIVEGVNS+NL SDSFKKNRIQVSNTKKPLFFYVNLAKRYMQQH+EVELSALGMAIATVVTVAEILKNNGLAVEKKIATSTVDIKDDSRGRPVQKAKI
Subjt:  MEEIVEGVNSMNLGSDSFKKNRIQVSNTKKPLFFYVNLAKRYMQQHEEVELSALGMAIATVVTVAEILKNNGLAVEKKIATSTVDIKDDSRGRPVQKAKI

Query:  EIVLGKTENFDAMMAAAAEERGEIGDADEQS
        EI+LGKTENFD +MAAAAEERGEIGDADEQS
Subjt:  EIVLGKTENFDAMMAAAAEERGEIGDADEQS

XP_022946216.1 uncharacterized protein At2g34160-like [Cucurbita moschata]6.1e-5692.37Show/hide
Query:  MEEIVEGVNSMNLGSDSFKKNRIQVSNTKKPLFFYVNLAKRYMQQHEEVELSALGMAIATVVTVAEILKNNGLAVEKKIATSTVDIKDDSRGRPVQKAKI
        MEEIVEGV+SMNLGSDS+KKNRIQVSNTKKPLFFYVNLAKRYMQQH+ VELSALGMAIATVVTVAEILKNNGLAVEKKI TSTVDIKDDSRGRPVQKAKI
Subjt:  MEEIVEGVNSMNLGSDSFKKNRIQVSNTKKPLFFYVNLAKRYMQQHEEVELSALGMAIATVVTVAEILKNNGLAVEKKIATSTVDIKDDSRGRPVQKAKI

Query:  EIVLGKTENFDAMMAAAAEERGEIGDADEQS
        EI+LGKTENFD +MAAAAEER E GDADEQS
Subjt:  EIVLGKTENFDAMMAAAAEERGEIGDADEQS

XP_038890892.1 uncharacterized protein At2g34160-like [Benincasa hispida]3.6e-5691.79Show/hide
Query:  MEEIVEGVNSMNLGS---DSFKKNRIQVSNTKKPLFFYVNLAKRYMQQHEEVELSALGMAIATVVTVAEILKNNGLAVEKKIATSTVDIKDDSRGRPVQK
        MEEIVEGVNSMNL S   DS+KKNRIQVSNTKKPLFFYVNLAKRYMQQH+EVELSALGMAIATVVTVAEILKNNGLA+EKKIATSTVDIKDDSRGRPVQK
Subjt:  MEEIVEGVNSMNLGS---DSFKKNRIQVSNTKKPLFFYVNLAKRYMQQHEEVELSALGMAIATVVTVAEILKNNGLAVEKKIATSTVDIKDDSRGRPVQK

Query:  AKIEIVLGKTENFDAMMAAAAEERGEIGDADEQS
        AKIEI+LGKT+NFD +MAAAAEERGEIGDADEQS
Subjt:  AKIEIVLGKTENFDAMMAAAAEERGEIGDADEQS

TrEMBL top hitse value%identityAlignment
A0A1S3C651 uncharacterized protein At2g34160-like1.4e-5895.42Show/hide
Query:  MEEIVEGVNSMNLGSDSFKKNRIQVSNTKKPLFFYVNLAKRYMQQHEEVELSALGMAIATVVTVAEILKNNGLAVEKKIATSTVDIKDDSRGRPVQKAKI
        MEEIVEGVNS+NL SDSFKKNRIQVSNTKKPLFFYVNLAKRYMQQH+EVELSALGMAIATVVTVAEILKNNGLAVEKKIATSTVDIKDDSRGRPVQKAKI
Subjt:  MEEIVEGVNSMNLGSDSFKKNRIQVSNTKKPLFFYVNLAKRYMQQHEEVELSALGMAIATVVTVAEILKNNGLAVEKKIATSTVDIKDDSRGRPVQKAKI

Query:  EIVLGKTENFDAMMAAAAEERGEIGDADEQS
        EI+LGKTENFD +MAAAAEERGEIGDADEQS
Subjt:  EIVLGKTENFDAMMAAAAEERGEIGDADEQS

A0A5D3BH52 DNA/RNA-binding protein Alba-like protein1.4e-5895.42Show/hide
Query:  MEEIVEGVNSMNLGSDSFKKNRIQVSNTKKPLFFYVNLAKRYMQQHEEVELSALGMAIATVVTVAEILKNNGLAVEKKIATSTVDIKDDSRGRPVQKAKI
        MEEIVEGVNS+NL SDSFKKNRIQVSNTKKPLFFYVNLAKRYMQQH+EVELSALGMAIATVVTVAEILKNNGLAVEKKIATSTVDIKDDSRGRPVQKAKI
Subjt:  MEEIVEGVNSMNLGSDSFKKNRIQVSNTKKPLFFYVNLAKRYMQQHEEVELSALGMAIATVVTVAEILKNNGLAVEKKIATSTVDIKDDSRGRPVQKAKI

Query:  EIVLGKTENFDAMMAAAAEERGEIGDADEQS
        EI+LGKTENFD +MAAAAEERGEIGDADEQS
Subjt:  EIVLGKTENFDAMMAAAAEERGEIGDADEQS

A0A6J1CNW3 uncharacterized protein At2g34160-like6.5e-5690.84Show/hide
Query:  MEEIVEGVNSMNLGSDSFKKNRIQVSNTKKPLFFYVNLAKRYMQQHEEVELSALGMAIATVVTVAEILKNNGLAVEKKIATSTVDIKDDSRGRPVQKAKI
        MEEIVEGVNS+NLG D +KKNRIQVSNTKKPLFFYVNLAKRYMQQH EVELSALGMAIATVVTVAEILKNNGL VEKKIATSTVDIKDDSRGRPVQKAKI
Subjt:  MEEIVEGVNSMNLGSDSFKKNRIQVSNTKKPLFFYVNLAKRYMQQHEEVELSALGMAIATVVTVAEILKNNGLAVEKKIATSTVDIKDDSRGRPVQKAKI

Query:  EIVLGKTENFDAMMAAAAEERGEIGDADEQS
        EI+LGKTENFD +MAAAAEERG+ GD DEQS
Subjt:  EIVLGKTENFDAMMAAAAEERGEIGDADEQS

A0A6J1G312 uncharacterized protein At2g34160-like2.9e-5692.37Show/hide
Query:  MEEIVEGVNSMNLGSDSFKKNRIQVSNTKKPLFFYVNLAKRYMQQHEEVELSALGMAIATVVTVAEILKNNGLAVEKKIATSTVDIKDDSRGRPVQKAKI
        MEEIVEGV+SMNLGSDS+KKNRIQVSNTKKPLFFYVNLAKRYMQQH+ VELSALGMAIATVVTVAEILKNNGLAVEKKI TSTVDIKDDSRGRPVQKAKI
Subjt:  MEEIVEGVNSMNLGSDSFKKNRIQVSNTKKPLFFYVNLAKRYMQQHEEVELSALGMAIATVVTVAEILKNNGLAVEKKIATSTVDIKDDSRGRPVQKAKI

Query:  EIVLGKTENFDAMMAAAAEERGEIGDADEQS
        EI+LGKTENFD +MAAAAEER E GDADEQS
Subjt:  EIVLGKTENFDAMMAAAAEERGEIGDADEQS

A0A6J1KJN4 uncharacterized protein At2g34160-like5.0e-5692.37Show/hide
Query:  MEEIVEGVNSMNLGSDSFKKNRIQVSNTKKPLFFYVNLAKRYMQQHEEVELSALGMAIATVVTVAEILKNNGLAVEKKIATSTVDIKDDSRGRPVQKAKI
        MEEIVEGV+SMNLGSDS+KKNRIQVSNTKKPLFFYVNLAKRYMQQH+ VELSALGMAIATVVTVAEILKNNGLAVEKKI TSTVDIKDDSRGRPVQKAKI
Subjt:  MEEIVEGVNSMNLGSDSFKKNRIQVSNTKKPLFFYVNLAKRYMQQHEEVELSALGMAIATVVTVAEILKNNGLAVEKKIATSTVDIKDDSRGRPVQKAKI

Query:  EIVLGKTENFDAMMAAAAEERGEIGDADEQS
        EI LGKTENFD +MAAAAEER E GDADEQS
Subjt:  EIVLGKTENFDAMMAAAAEERGEIGDADEQS

SwissProt top hitse value%identityAlignment
O22969 Uncharacterized protein At2g341603.1e-4782.64Show/hide
Query:  MEEIVEGVNSMNLGSDSFKKNRIQVSNTKKPLFFYVNLAKRYMQQHEEVELSALGMAIATVVTVAEILKNNGLAVEKKIATSTVDIKDDSRGRPVQKAKI
        MEEI +GVN+MNL +DS KKNRIQVSNTKKPLFFYVNLAKRYMQQ+ +VELSALGMAIATVVTV EILKNNG AVEKKI TSTVDIKDD+RGRPVQKAKI
Subjt:  MEEIVEGVNSMNLGSDSFKKNRIQVSNTKKPLFFYVNLAKRYMQQHEEVELSALGMAIATVVTVAEILKNNGLAVEKKIATSTVDIKDDSRGRPVQKAKI

Query:  EIVLGKTENFDAMMAAAAEER
        EI L K+E FD +MAAA EE+
Subjt:  EIVLGKTENFDAMMAAAAEER

Arabidopsis top hitse value%identityAlignment
AT1G29250.1 Alba DNA/RNA-binding protein1.2e-4980.92Show/hide
Query:  MEEIVEGVNSMNLGSDSFKKNRIQVSNTKKPLFFYVNLAKRYMQQHEEVELSALGMAIATVVTVAEILKNNGLAVEKKIATSTVDIKDDSRGRPVQKAKI
        MEEI EGVN+MNL  D+ KKNRIQVSNTKKPLFFYVNLAKRYMQQ+ +VELSALGMAIATVVTVAEILKNNG AVEKKI TSTVDIKDDSRGRPVQKAKI
Subjt:  MEEIVEGVNSMNLGSDSFKKNRIQVSNTKKPLFFYVNLAKRYMQQHEEVELSALGMAIATVVTVAEILKNNGLAVEKKIATSTVDIKDDSRGRPVQKAKI

Query:  EIVLGKTENFDAMMAAAAEERGEIGDADEQS
        EI L K+E FD +MAAA EE+ E  +A EQ+
Subjt:  EIVLGKTENFDAMMAAAAEERGEIGDADEQS

AT2G34160.1 Alba DNA/RNA-binding protein2.2e-4882.64Show/hide
Query:  MEEIVEGVNSMNLGSDSFKKNRIQVSNTKKPLFFYVNLAKRYMQQHEEVELSALGMAIATVVTVAEILKNNGLAVEKKIATSTVDIKDDSRGRPVQKAKI
        MEEI +GVN+MNL +DS KKNRIQVSNTKKPLFFYVNLAKRYMQQ+ +VELSALGMAIATVVTV EILKNNG AVEKKI TSTVDIKDD+RGRPVQKAKI
Subjt:  MEEIVEGVNSMNLGSDSFKKNRIQVSNTKKPLFFYVNLAKRYMQQHEEVELSALGMAIATVVTVAEILKNNGLAVEKKIATSTVDIKDDSRGRPVQKAKI

Query:  EIVLGKTENFDAMMAAAAEER
        EI L K+E FD +MAAA EE+
Subjt:  EIVLGKTENFDAMMAAAAEER

AT3G04620.1 Alba DNA/RNA-binding protein5.1e-3775.76Show/hide
Query:  DSFKKNRIQVSNTKKPLFFYVNLAKRYMQQHEEVELSALGMAIATVVTVAEILKNNGLAVEKKIATSTVDIKDDSRGRPVQKAKIEIVLGKTENFDAMM
        ++ KKNRIQVSNTKKPLFFYVNLAKRY+QQH EVELSALGMAI TVVT++EILKNNGLA EKK+ TSTV +KD+++G+ VQKAKIEIVLGK++ FD+++
Subjt:  DSFKKNRIQVSNTKKPLFFYVNLAKRYMQQHEEVELSALGMAIATVVTVAEILKNNGLAVEKKIATSTVDIKDDSRGRPVQKAKIEIVLGKTENFDAMM


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGAAATTGTAGAAGGTGTGAACTCCATGAACTTGGGCTCCGATTCGTTTAAGAAGAATCGGATTCAGGTTTCCAATACCAAGAAGCCTTTGTTCTTCTACGTCAA
TCTCGCTAAGAGGTACATGCAGCAGCATGAGGAAGTCGAACTTTCTGCTCTTGGAATGGCAATTGCTACAGTTGTAACGGTTGCTGAAATTCTGAAAAACAATGGATTGG
CTGTTGAGAAAAAGATTGCAACCTCAACAGTTGATATCAAGGATGACTCGAGAGGACGACCTGTCCAGAAGGCTAAGATTGAGATAGTGCTGGGTAAGACTGAAAACTTC
GACGCAATGATGGCAGCTGCTGCTGAGGAAAGGGGGGAGATAGGCGATGCAGATGAGCAGAGTTAA
mRNA sequenceShow/hide mRNA sequence
AAAAGGTTAAAGAGAGGAAGTAAGAGAAAATCAGAGCTTATAATAACTCTTCCTTTGACCTTCAATAACCCGGAAAATTAGGGTTTTGAGTTGCAGTGTTTTTAGGGTTT
TTGCGAGGTTGAGGAGGAGGAGCTCGATGGAAGAAATTGTAGAAGGTGTGAACTCCATGAACTTGGGCTCCGATTCGTTTAAGAAGAATCGGATTCAGGTTTCCAATACC
AAGAAGCCTTTGTTCTTCTACGTCAATCTCGCTAAGAGGTACATGCAGCAGCATGAGGAAGTCGAACTTTCTGCTCTTGGAATGGCAATTGCTACAGTTGTAACGGTTGC
TGAAATTCTGAAAAACAATGGATTGGCTGTTGAGAAAAAGATTGCAACCTCAACAGTTGATATCAAGGATGACTCGAGAGGACGACCTGTCCAGAAGGCTAAGATTGAGA
TAGTGCTGGGTAAGACTGAAAACTTCGACGCAATGATGGCAGCTGCTGCTGAGGAAAGGGGGGAGATAGGCGATGCAGATGAGCAGAGTTAAAAGATGAATTACGTTTGC
TGTATCGTTTCCTTTAGTTATAATTTTTGTTTGTGATGAACCAAATTTTCCATCAATTATTCGTAGCTCTTTAGGTATTTAGTTGAGGTACTATTTTTCATAGTGAGTTT
GTTAATAATTTCATTTTAGGGATCTTCACAATTTATTTGGAGTCTTTTACCATATAGAAAACCAATTTTTTTTA
Protein sequenceShow/hide protein sequence
MEEIVEGVNSMNLGSDSFKKNRIQVSNTKKPLFFYVNLAKRYMQQHEEVELSALGMAIATVVTVAEILKNNGLAVEKKIATSTVDIKDDSRGRPVQKAKIEIVLGKTENF
DAMMAAAAEERGEIGDADEQS