; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0017490 (gene) of Snake gourd v1 genome

Gene IDTan0017490
OrganismTrichosanthes anguina (Snake gourd v1)
Descriptionclassical arabinogalactan protein 9-like
Genome locationLG02:14153076..14155315
RNA-Seq ExpressionTan0017490
SyntenyTan0017490
Gene Ontology termsGO:0005886 - plasma membrane (cellular component)
InterPro domainsIPR044981 - Lysine-rich arabinogalactan protein AGP9/17/18


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8645846.1 hypothetical protein Csa_017309 [Cucumis sativus]4.4e-4478.65Show/hide
Query:  QALLCFSFICIAFAGAAAQSPSSPPTA--------TPPPVSAPPP-ATPPPVTPPPATPPPATPPPATPPPASPPPATPPPASPPPATPPPASPPPAT-P
        +ALLCF+ I IAF  A AQSPSSPPTA        TPPPVS+PPP ATPPP +PPPA+PPPA+PPPATPPPASPPPA+PPPASPPPA+PPPA+PPPA+ P
Subjt:  QALLCFSFICIAFAGAAAQSPSSPPTA--------TPPPVSAPPP-ATPPPVTPPPATPPPATPPPATPPPASPPPATPPPASPPPATPPPASPPPAT-P

Query:  PPATPPPAPLASPPAAVPAPAPSKKKSK-AAPAPSPLSSPPSPSAEAPGPAGSD-SPTPSQNDNSGASEKVWRKEMMVGSMLIGMGYVFMML
        PPATPPPAPLASPP AVPAPAPSKKK K AAP+PSP+SSPP+PS EAPGPAG D SPTPSQNDNSG  EKVWRKE MVGS++IGMGYVF+ML
Subjt:  PPATPPPAPLASPPAAVPAPAPSKKKSK-AAPAPSPLSSPPSPSAEAPGPAGSD-SPTPSQNDNSGASEKVWRKEMMVGSMLIGMGYVFMML

KAG6571935.1 hypothetical protein SDJN03_28663, partial [Cucurbita argyrosperma subsp. sororia]3.0e-4573.24Show/hide
Query:  QALLCFSFICIAFAGAAAQSPSSPPT--------------ATPPPVSAPPPATPPPVT---------------PPPATPPPATPPPATPPPASPPPATPP
        QAL C + I IAFA A AQ PSSPPT              ATPPPVSAPPPATPPP T               PPPATPPPA+PPPATPPPASPPPATPP
Subjt:  QALLCFSFICIAFAGAAAQSPSSPPT--------------ATPPPVSAPPPATPPPVT---------------PPPATPPPATPPPATPPPASPPPATPP

Query:  PASPPPATPPPAS-----PPPATPPPATPPPAPLASPPAAVPAPAPSKKKSKAAPAPSPLSSPPSPSAEAPGPAGSDSPTPSQNDNSGASEKVWRKEMMV
        PASPPPATPPPAS     PPPATPPPATPPPAPLASPPAAVPAPAPSKKK KAAP P+P+SSPP PSAE PGPAG +SPTPSQNDNSG  EK WRKE MV
Subjt:  PASPPPATPPPAS-----PPPATPPPATPPPAPLASPPAAVPAPAPSKKKSKAAPAPSPLSSPPSPSAEAPGPAGSDSPTPSQNDNSGASEKVWRKEMMV

Query:  GSMLIGMGYVFMM
        GSMLIGMGYV MM
Subjt:  GSMLIGMGYVFMM

XP_008455018.1 PREDICTED: classical arabinogalactan protein 9 [Cucumis melo]3.0e-4574.4Show/hide
Query:  MDCRQALLCFSFICIAFAGAAAQSPSSPPTA--------------TPPPVSAPPP-------ATPPPVTPPPATPPPATPPPATPPPASPPPATPPPASP
        MD R  LLCF+FI IAFA A AQSPSSPPTA              TPPPVS+PPP       ATPPP +PPPA+PPPA+PPPATPPPASPPPA+PPPASP
Subjt:  MDCRQALLCFSFICIAFAGAAAQSPSSPPTA--------------TPPPVSAPPP-------ATPPPVTPPPATPPPATPPPATPPPASPPPATPPPASP

Query:  PPATPPPASPPPATPPPATPPPAPLASPPAAVPAPAPSKKKSK-AAPAPSPLSSPPSPSAEAPGPAGSD-SPTPSQNDNSGASEKVWRKEMMVGSMLIGM
        PPA+PPPASPPPA+PPPA PPPAPLASPP AVPAPAPSKKK K AAP P+P+SSPP+PS EAPGPAG D SPTPSQNDNSG  EKVWRKE MVGS++IGM
Subjt:  PPATPPPASPPPATPPPATPPPAPLASPPAAVPAPAPSKKKSK-AAPAPSPLSSPPSPSAEAPGPAGSD-SPTPSQNDNSGASEKVWRKEMMVGSMLIGM

Query:  GYVFMML
        GYVF+ML
Subjt:  GYVFMML

XP_022952421.1 classical arabinogalactan protein 9-like [Cucurbita moschata]4.7e-4675.24Show/hide
Query:  QALLCFSFICIAFAGAAAQSPSSPPT-------------ATPPPVSAPPPAT---------PPPVTPPPATPPPATPPPATPPPASPPPATPPPASPPPA
        QAL CF+ I +AFA A AQ PSSPPT             ATPPPVSAPPPAT         PPP TPPPA+PPPATPPPA+PPPASPPPATPPPASPPPA
Subjt:  QALLCFSFICIAFAGAAAQSPSSPPT-------------ATPPPVSAPPPAT---------PPPVTPPPATPPPATPPPATPPPASPPPATPPPASPPPA

Query:  TPPPAS-----PPPATPPPATPPPAPLASPPAAVPAPAPSKKKSKAAPAPSPLSSPPSPSAEAPGPAGSDSPTPSQNDNSGASEKVWRKEMMVGSMLIGM
        TPPPAS     PPPATPPPATPPPAPLASPPAAVPAPAPSKKK KAAP P+P+SSPP PSAE PGPAG +SPTPSQNDNSG  EK WRKE MVGSMLIGM
Subjt:  TPPPAS-----PPPATPPPATPPPAPLASPPAAVPAPAPSKKKSKAAPAPSPLSSPPSPSAEAPGPAGSDSPTPSQNDNSGASEKVWRKEMMVGSMLIGM

Query:  GYVFMM
        GYV MM
Subjt:  GYVFMM

XP_023553858.1 classical arabinogalactan protein 9-like [Cucurbita pepo subsp. pepo]4.2e-4775.86Show/hide
Query:  QALLCFSFICIAFAGAAAQSPSSPPT--------------ATPPPVS----------APPPATPPPVTPPPATPPPATPPPATPPPASPPPATPPPASPP
        QAL CF+ I IAFA A AQ PSSPPT              ATPPPVS          +PPPATPPP +PPPATPPPA+PPPATPPPASPPPATPPPASPP
Subjt:  QALLCFSFICIAFAGAAAQSPSSPPT--------------ATPPPVS----------APPPATPPPVTPPPATPPPATPPPATPPPASPPPATPPPASPP

Query:  PATPPPASPPPATPPPATPPPAPLASPPAAVPAPAPSKKKSKAAPAPSPLSSPPSPSAEAPGPAGSDSPTPSQNDNSGASEKVWRKEMMVGSMLIGMGYV
        PATPPPASPPPATPPPATPPP PLASPPAAVPAPAPSKKK KAAP P+P+SSPP PSAE PGPAG +SPTPSQNDNSG  EK WRKE MVGSMLIGMGYV
Subjt:  PATPPPASPPPATPPPATPPPAPLASPPAAVPAPAPSKKKSKAAPAPSPLSSPPSPSAEAPGPAGSDSPTPSQNDNSGASEKVWRKEMMVGSMLIGMGYV

Query:  FMM
         MM
Subjt:  FMM

TrEMBL top hitse value%identityAlignment
A0A0A0K6D8 Uncharacterized protein2.1e-4478.65Show/hide
Query:  QALLCFSFICIAFAGAAAQSPSSPPTA--------TPPPVSAPPP-ATPPPVTPPPATPPPATPPPATPPPASPPPATPPPASPPPATPPPASPPPAT-P
        +ALLCF+ I IAF  A AQSPSSPPTA        TPPPVS+PPP ATPPP +PPPA+PPPA+PPPATPPPASPPPA+PPPASPPPA+PPPA+PPPA+ P
Subjt:  QALLCFSFICIAFAGAAAQSPSSPPTA--------TPPPVSAPPP-ATPPPVTPPPATPPPATPPPATPPPASPPPATPPPASPPPATPPPASPPPAT-P

Query:  PPATPPPAPLASPPAAVPAPAPSKKKSK-AAPAPSPLSSPPSPSAEAPGPAGSD-SPTPSQNDNSGASEKVWRKEMMVGSMLIGMGYVFMML
        PPATPPPAPLASPP AVPAPAPSKKK K AAP+PSP+SSPP+PS EAPGPAG D SPTPSQNDNSG  EKVWRKE MVGS++IGMGYVF+ML
Subjt:  PPATPPPAPLASPPAAVPAPAPSKKKSK-AAPAPSPLSSPPSPSAEAPGPAGSD-SPTPSQNDNSGASEKVWRKEMMVGSMLIGMGYVFMML

A0A1S3BZW9 classical arabinogalactan protein 91.5e-4574.4Show/hide
Query:  MDCRQALLCFSFICIAFAGAAAQSPSSPPTA--------------TPPPVSAPPP-------ATPPPVTPPPATPPPATPPPATPPPASPPPATPPPASP
        MD R  LLCF+FI IAFA A AQSPSSPPTA              TPPPVS+PPP       ATPPP +PPPA+PPPA+PPPATPPPASPPPA+PPPASP
Subjt:  MDCRQALLCFSFICIAFAGAAAQSPSSPPTA--------------TPPPVSAPPP-------ATPPPVTPPPATPPPATPPPATPPPASPPPATPPPASP

Query:  PPATPPPASPPPATPPPATPPPAPLASPPAAVPAPAPSKKKSK-AAPAPSPLSSPPSPSAEAPGPAGSD-SPTPSQNDNSGASEKVWRKEMMVGSMLIGM
        PPA+PPPASPPPA+PPPA PPPAPLASPP AVPAPAPSKKK K AAP P+P+SSPP+PS EAPGPAG D SPTPSQNDNSG  EKVWRKE MVGS++IGM
Subjt:  PPATPPPASPPPATPPPATPPPAPLASPPAAVPAPAPSKKKSK-AAPAPSPLSSPPSPSAEAPGPAGSD-SPTPSQNDNSGASEKVWRKEMMVGSMLIGM

Query:  GYVFMML
        GYVF+ML
Subjt:  GYVFMML

A0A5A7SJX5 Classical arabinogalactan protein 91.5e-4574.4Show/hide
Query:  MDCRQALLCFSFICIAFAGAAAQSPSSPPTA--------------TPPPVSAPPP-------ATPPPVTPPPATPPPATPPPATPPPASPPPATPPPASP
        MD R  LLCF+FI IAFA A AQSPSSPPTA              TPPPVS+PPP       ATPPP +PPPA+PPPA+PPPATPPPASPPPA+PPPASP
Subjt:  MDCRQALLCFSFICIAFAGAAAQSPSSPPTA--------------TPPPVSAPPP-------ATPPPVTPPPATPPPATPPPATPPPASPPPATPPPASP

Query:  PPATPPPASPPPATPPPATPPPAPLASPPAAVPAPAPSKKKSK-AAPAPSPLSSPPSPSAEAPGPAGSD-SPTPSQNDNSGASEKVWRKEMMVGSMLIGM
        PPA+PPPASPPPA+PPPA PPPAPLASPP AVPAPAPSKKK K AAP P+P+SSPP+PS EAPGPAG D SPTPSQNDNSG  EKVWRKE MVGS++IGM
Subjt:  PPATPPPASPPPATPPPATPPPAPLASPPAAVPAPAPSKKKSK-AAPAPSPLSSPPSPSAEAPGPAGSD-SPTPSQNDNSGASEKVWRKEMMVGSMLIGM

Query:  GYVFMML
        GYVF+ML
Subjt:  GYVFMML

A0A6J1GK65 classical arabinogalactan protein 9-like2.3e-4675.24Show/hide
Query:  QALLCFSFICIAFAGAAAQSPSSPPT-------------ATPPPVSAPPPAT---------PPPVTPPPATPPPATPPPATPPPASPPPATPPPASPPPA
        QAL CF+ I +AFA A AQ PSSPPT             ATPPPVSAPPPAT         PPP TPPPA+PPPATPPPA+PPPASPPPATPPPASPPPA
Subjt:  QALLCFSFICIAFAGAAAQSPSSPPT-------------ATPPPVSAPPPAT---------PPPVTPPPATPPPATPPPATPPPASPPPATPPPASPPPA

Query:  TPPPAS-----PPPATPPPATPPPAPLASPPAAVPAPAPSKKKSKAAPAPSPLSSPPSPSAEAPGPAGSDSPTPSQNDNSGASEKVWRKEMMVGSMLIGM
        TPPPAS     PPPATPPPATPPPAPLASPPAAVPAPAPSKKK KAAP P+P+SSPP PSAE PGPAG +SPTPSQNDNSG  EK WRKE MVGSMLIGM
Subjt:  TPPPAS-----PPPATPPPATPPPAPLASPPAAVPAPAPSKKKSKAAPAPSPLSSPPSPSAEAPGPAGSDSPTPSQNDNSGASEKVWRKEMMVGSMLIGM

Query:  GYVFMM
        GYV MM
Subjt:  GYVFMM

A0A6J1JN37 classical arabinogalactan protein 9 isoform X18.6e-3872.38Show/hide
Query:  QALLCFSFICIAFAGAAAQSPSSPPTATPPPVSAPPPATPPPVTPPPATPPPATPPPATPPPASPPPATPPPASPPPATPPPASPPPATPPPATPPPAPL
        QALLCF+FI I FAGA AQSPS+PPTATPPPVS+PPPATPPPV                   +SPPPATPPP SP    PPPASPPPATPPPATPPPAPL
Subjt:  QALLCFSFICIAFAGAAAQSPSSPPTATPPPVSAPPPATPPPVTPPPATPPPATPPPATPPPASPPPATPPPASPPPATPPPASPPPATPPPATPPPAPL

Query:  ASPPAAVPAPAPSKKKSKAAPAPSPLSSPPSPSAEAPGPAGSDSPTPSQNDNSGASEKVWRKEMMVGSM-LIGMGYVFMML
        ASPPAAVPAPAPSKKKSKAA +PSPLSSPP+PSAEAP P  SDSPTPSQNDNSGA       E MVG M ++GMGYVFMM+
Subjt:  ASPPAAVPAPAPSKKKSKAAPAPSPLSSPPSPSAEAPGPAGSDSPTPSQNDNSGASEKVWRKEMMVGSM-LIGMGYVFMML

SwissProt top hitse value%identityAlignment
Q9C5S0 Classical arabinogalactan protein 92.9e-1459.69Show/hide
Query:  ICIA-FAGAAAQSPSSPPTAT---PPPVSAPPPATPPPVT-PPPAT--PPPAT--PPPATPPP--ASPPPATPPPASPPP-ATPPP--ASPPPATPPP-A
        ICI   AG   Q+P+SPPTAT   P P + PP ATPPPV+ PPP T  PPP T  PPPA PPP  +SPPPA+PPPA+PPP A+PPP  ASPPPATPPP A
Subjt:  ICIA-FAGAAAQSPSSPPTAT---PPPVSAPPPATPPPVT-PPPAT--PPPAT--PPPATPPP--ASPPPATPPPASPPP-ATPPP--ASPPPATPPP-A

Query:  TPPPAPLASPPAAVPAPAPSKKKSKAAPAPSPLSSPPSPSAEAPGPA-GSDSPTPSQ---NDNSGASEKVWRKEMMVGSMLIGMGYVFMML
        TPPPAPLASPPA VPAPAP+ K    +P+PSP SSPP PS++APGP+  S SP PS    ND +GAS+       MV S++ G   V+ M+
Subjt:  TPPPAPLASPPAAVPAPAPSKKKSKAAPAPSPLSSPPSPSAEAPGPA-GSDSPTPSQ---NDNSGASEKVWRKEMMVGSMLIGMGYVFMML

Arabidopsis top hitse value%identityAlignment
AT2G14890.1 arabinogalactan protein 92.0e-1559.69Show/hide
Query:  ICIA-FAGAAAQSPSSPPTAT---PPPVSAPPPATPPPVT-PPPAT--PPPAT--PPPATPPP--ASPPPATPPPASPPP-ATPPP--ASPPPATPPP-A
        ICI   AG   Q+P+SPPTAT   P P + PP ATPPPV+ PPP T  PPP T  PPPA PPP  +SPPPA+PPPA+PPP A+PPP  ASPPPATPPP A
Subjt:  ICIA-FAGAAAQSPSSPPTAT---PPPVSAPPPATPPPVT-PPPAT--PPPAT--PPPATPPP--ASPPPATPPPASPPP-ATPPP--ASPPPATPPP-A

Query:  TPPPAPLASPPAAVPAPAPSKKKSKAAPAPSPLSSPPSPSAEAPGPA-GSDSPTPSQ---NDNSGASEKVWRKEMMVGSMLIGMGYVFMML
        TPPPAPLASPPA VPAPAP+ K    +P+PSP SSPP PS++APGP+  S SP PS    ND +GAS+       MV S++ G   V+ M+
Subjt:  TPPPAPLASPPAAVPAPAPSKKKSKAAPAPSPLSSPPSPSAEAPGPA-GSDSPTPSQ---NDNSGASEKVWRKEMMVGSMLIGMGYVFMML

AT2G14890.2 arabinogalactan protein 92.3e-1465.41Show/hide
Query:  ICIA-FAGAAAQSPSSPPTAT---PPPVSAPPPATPPPVT-PPPAT--PPPAT--PPPATPPP--ASPPPATPPPASPPP-ATPPP--ASPPPATPPP-A
        ICI   AG   Q+P+SPPTAT   P P + PP ATPPPV+ PPP T  PPP T  PPPA PPP  +SPPPA+PPPA+PPP A+PPP  ASPPPATPPP A
Subjt:  ICIA-FAGAAAQSPSSPPTAT---PPPVSAPPPATPPPVT-PPPAT--PPPAT--PPPATPPP--ASPPPATPPPASPPP-ATPPP--ASPPPATPPP-A

Query:  TPPPAPLASPPAAVPAPAPSKKKSKAAPAPSPLSSPPSPSAEAPGPA-GSDSPTPSQND
        TPPPAPLASPPA VPAPAP+ K    +P+PSP SSPP PS++APGP+  S SP PS  D
Subjt:  TPPPAPLASPPAAVPAPAPSKKKSKAAPAPSPLSSPPSPSAEAPGPA-GSDSPTPSQND


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATTGTCGTCAAGCTTTGTTGTGTTTCAGTTTCATCTGCATTGCCTTCGCCGGCGCCGCTGCTCAGTCCCCCTCCAGTCCTCCCACTGCCACTCCTCCGCCTGTTTC
TGCTCCCCCTCCGGCCACTCCTCCACCAGTCACTCCTCCTCCAGCCACTCCTCCTCCCGCCACTCCCCCTCCGGCCACCCCTCCTCCGGCATCCCCACCCCCAGCCACCC
CTCCTCCGGCCTCTCCTCCGCCAGCCACCCCGCCTCCGGCTTCTCCTCCACCTGCAACCCCACCTCCGGCTACTCCTCCACCTGCACCTCTAGCATCCCCACCGGCGGCG
GTTCCGGCTCCTGCACCCAGCAAGAAGAAGTCGAAGGCGGCTCCGGCTCCGTCCCCACTGTCGAGCCCACCGTCGCCGTCAGCCGAGGCTCCAGGACCCGCCGGCTCTGA
TTCTCCTACCCCATCTCAGAACGACAATAGCGGAGCGAGCGAGAAAGTGTGGAGAAAGGAGATGATGGTGGGGAGCATGTTGATTGGAATGGGCTATGTATTTATGATGC
TTTAG
mRNA sequenceShow/hide mRNA sequence
ATTGTGTCTTTCTTTTGATTTCCTCTCTCAAACTCTCTTCTCTTCGTAAGATCTTCGGAAGAGGAGAATTATGGATTGTCGTCAAGCTTTGTTGTGTTTCAGTTTCATCT
GCATTGCCTTCGCCGGCGCCGCTGCTCAGTCCCCCTCCAGTCCTCCCACTGCCACTCCTCCGCCTGTTTCTGCTCCCCCTCCGGCCACTCCTCCACCAGTCACTCCTCCT
CCAGCCACTCCTCCTCCCGCCACTCCCCCTCCGGCCACCCCTCCTCCGGCATCCCCACCCCCAGCCACCCCTCCTCCGGCCTCTCCTCCGCCAGCCACCCCGCCTCCGGC
TTCTCCTCCACCTGCAACCCCACCTCCGGCTACTCCTCCACCTGCACCTCTAGCATCCCCACCGGCGGCGGTTCCGGCTCCTGCACCCAGCAAGAAGAAGTCGAAGGCGG
CTCCGGCTCCGTCCCCACTGTCGAGCCCACCGTCGCCGTCAGCCGAGGCTCCAGGACCCGCCGGCTCTGATTCTCCTACCCCATCTCAGAACGACAATAGCGGAGCGAGC
GAGAAAGTGTGGAGAAAGGAGATGATGGTGGGGAGCATGTTGATTGGAATGGGCTATGTATTTATGATGCTTTAGGAGGAAGCTGTGTGGACATAGTTGATATATGTCTT
TTTCCTTCTTGCAGTGCCCCCTTTTTTGCTGTCTATGTTGGCTTCTTCTTTTTTTCTTTCATTATTCTTCTATATATCTATAACCCCTTTAATTGGCTGCTCTATATTTC
ATTTCATTTTGATTATTATTAGCCCCATGTCTTGTTTGGGACTTTTCATTTATTAGCCTTTGGACTCTCTCTTTATATATAAATACCCATTTGCTTGGATTCTTTTGAGG
CCAAAAA
Protein sequenceShow/hide protein sequence
MDCRQALLCFSFICIAFAGAAAQSPSSPPTATPPPVSAPPPATPPPVTPPPATPPPATPPPATPPPASPPPATPPPASPPPATPPPASPPPATPPPATPPPAPLASPPAA
VPAPAPSKKKSKAAPAPSPLSSPPSPSAEAPGPAGSDSPTPSQNDNSGASEKVWRKEMMVGSMLIGMGYVFMML