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Tan0017492 (gene) of Snake gourd v1 genome

Gene IDTan0017492
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionUnknown protein
Genome locationLG01:36467526..36468102
RNA-Seq ExpressionTan0017492
SyntenyTan0017492
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8652730.1 hypothetical protein Csa_013247 [Cucumis sativus]6.3e-0864.81Show/hide
Query:  MDSKKEKKKRSLELPPRRGLIKIGIFRSIFRTAKSVSEGFARRRRGNESDNSGS
        M+S K+ +KR  E PPRRGLIKI IFRSIFRT KS+ EGFAR RR +E+  S S
Subjt:  MDSKKEKKKRSLELPPRRGLIKIGIFRSIFRTAKSVSEGFARRRRGNESDNSGS
KAG6607199.1 hypothetical protein SDJN03_00541, partial [Cucurbita argyrosperma subsp. sororia]1.1e-0465.31Show/hide
Query:  MDSKKEKKKRSLELPPRRGLIKIGIFRSIFRTAKSVSEGFARRRRGNES
        MDSK  K++ S ELPPRRG I IGIF+SIFRT K + EGF   RR NES
Subjt:  MDSKKEKKKRSLELPPRRGLIKIGIFRSIFRTAKSVSEGFARRRRGNES
TYK08469.1 hypothetical protein E5676_scaffold74032G00010 [Cucumis melo var. makuwa]6.3e-0866.67Show/hide
Query:  MDSKKEKKKRSLELPPRRGLIKIGIFRSIFRTAKSVSEGFARRRRGNESDNSGS
        M+S KE +KR  E PPRRGLIKI IFRSIFRT KS+ EGFAR RR +E+  S S
Subjt:  MDSKKEKKKRSLELPPRRGLIKIGIFRSIFRTAKSVSEGFARRRRGNESDNSGS
TrEMBL top hitse value%identityAlignment
A0A0A0LV79 Uncharacterized protein3.1e-0864.81Show/hide
Query:  MDSKKEKKKRSLELPPRRGLIKIGIFRSIFRTAKSVSEGFARRRRGNESDNSGS
        M+S K+ +KR  E PPRRGLIKI IFRSIFRT KS+ EGFAR RR +E+  S S
Subjt:  MDSKKEKKKRSLELPPRRGLIKIGIFRSIFRTAKSVSEGFARRRRGNESDNSGS
A0A5D3CDP6 Uncharacterized protein3.1e-0866.67Show/hide
Query:  MDSKKEKKKRSLELPPRRGLIKIGIFRSIFRTAKSVSEGFARRRRGNESDNSGS
        M+S KE +KR  E PPRRGLIKI IFRSIFRT KS+ EGFAR RR +E+  S S
Subjt:  MDSKKEKKKRSLELPPRRGLIKIGIFRSIFRTAKSVSEGFARRRRGNESDNSGS
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACTCCAAAAAAGAAAAAAAGAAGCGATCCTTAGAGCTGCCGCCGAGAAGAGGCCTTATCAAGATCGGAATATTCCGAAGTATCTTCCGGACAGCGAAATCGGTATC
GGAAGGATTCGCTAGACGCCGGAGAGGAAACGAATCCGACAACTCAGGCTCCTGCTTCCACTGGCTACAACTCGGCAGATTCATGAAGTGTAAGCGAGTTCATGACTCGG
AAACTGAATCCGAGTTATGA
mRNA sequenceShow/hide mRNA sequence
AAAAAAAAGAAATCTCCAATTTCAGACTGTTTAGACCGTCTGCGCCTCCCGCCGCAGCTTCTTACTCCTTCACTCTGCTCCGATCACTCTCTCTCCATTTCTCCCTCCAA
TTGCCTCAATTTCAATGGACTCCAAAAAAGAAAAAAAGAAGCGATCCTTAGAGCTGCCGCCGAGAAGAGGCCTTATCAAGATCGGAATATTCCGAAGTATCTTCCGGACA
GCGAAATCGGTATCGGAAGGATTCGCTAGACGCCGGAGAGGAAACGAATCCGACAACTCAGGCTCCTGCTTCCACTGGCTACAACTCGGCAGATTCATGAAGTGTAAGCG
AGTTCATGACTCGGAAACTGAATCCGAGTTATGAACTCGCTCACTCATGGATTACTAGGGGTCTCGCTCTCCATCCGCTGTAGTGTATTATTTTAGTATCTACTCCACGC
CATAACCTTTGGGTTTTGTTTCCCCTTTTCTTCTTCATCTCCTTCCTTTTGTTTATTTGATTATTATTTTTTTCTGTACTTAATTTTTTTTTTATGTTGCTGTTAATTGT
ATACTGGTTGAGATCCCTGATATGTTA
Protein sequenceShow/hide protein sequence
MDSKKEKKKRSLELPPRRGLIKIGIFRSIFRTAKSVSEGFARRRRGNESDNSGSCFHWLQLGRFMKCKRVHDSETESEL