; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0017496 (gene) of Snake gourd v1 genome

Gene IDTan0017496
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionMediator of RNA polymerase II transcription subunit 6
Genome locationLG04:86527068..86530545
RNA-Seq ExpressionTan0017496
SyntenyTan0017496
Gene Ontology termsGO:0006357 - regulation of transcription by RNA polymerase II (biological process)
GO:0045893 - positive regulation of transcription, DNA-templated (biological process)
GO:0016592 - mediator complex (cellular component)
GO:0070847 - core mediator complex (cellular component)
GO:0003713 - transcription coactivator activity (molecular function)
InterPro domainsIPR007018 - Mediator complex, subunit Med6
IPR016820 - Mediator complex, subunit Med6, metazoa/plant
IPR038566 - Mediator complex, subunit Med6 superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6606737.1 Mediator of RNA polymerase II transcription subunit 6, partial [Cucurbita argyrosperma subsp. sororia]3.2e-13093.31Show/hide
Query:  MTTPPPPAPPPGIGNFEGGPLPAAPQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTGTEYMLNEVME
        M TP    PPPGIGNFEGGP PAAPQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTG EYMLNEVME
Subjt:  MTTPPPPAPPPGIGNFEGGPLPAAPQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTGTEYMLNEVME

Query:  PHLFVFRKQKRDGPEKVTPMLTYYILDGSIYQAPQLCNVFAARVSRALYYISKAFTTASSKLEKIGYVDSENESEEVKPGKEAIDFKEVKRVDRILASLQ
        PHLFVFRKQKRDGPEKVTPMLTYYILDGSIYQAPQLCNVFAARVSRALYYISKAFTTASSKLEKIGYVDSENE+EEVKP K  IDFKEVKRVDRILASLQ
Subjt:  PHLFVFRKQKRDGPEKVTPMLTYYILDGSIYQAPQLCNVFAARVSRALYYISKAFTTASSKLEKIGYVDSENESEEVKPGKEAIDFKEVKRVDRILASLQ

Query:  RKLPPAPPPPPFPEGYIPAPASEAEKGTENQQGEPQQPPADPIIDHGPAKRMKF
        RKLPPAPPPPPFPEGY+PAPASEAEKG E+QQGE QQP ADPIID GPAKRMKF
Subjt:  RKLPPAPPPPPFPEGYIPAPASEAEKGTENQQGEPQQPPADPIIDHGPAKRMKF

XP_004149176.2 mediator of RNA polymerase II transcription subunit 6 [Cucumis sativus]3.2e-13092.52Show/hide
Query:  MTTPPPPAPPPGIGNFEGGPLPAAPQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTGTEYMLNEVME
        M TPPPP  PPG GNFEGGPLPAAPQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTG EYMLNEVME
Subjt:  MTTPPPPAPPPGIGNFEGGPLPAAPQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTGTEYMLNEVME

Query:  PHLFVFRKQKRDGPEKVTPMLTYYILDGSIYQAPQLCNVFAARVSRALYYISKAFTTASSKLEKIGYVDSENESEEVKPGKEAIDFKEVKRVDRILASLQ
        PHLFVFRKQKRDGPEKVTPMLTYYILDGSIYQAPQLC+VFAARVSRALYYISKAFTTASSKLEKIGYVDSENESEEVKP KE I+FKEVKRVD ILASLQ
Subjt:  PHLFVFRKQKRDGPEKVTPMLTYYILDGSIYQAPQLCNVFAARVSRALYYISKAFTTASSKLEKIGYVDSENESEEVKPGKEAIDFKEVKRVDRILASLQ

Query:  RKLPPAPPPPPFPEGYIPAPASEAEKGTENQQGEPQQPPADPIIDHGPAKRMKF
        RKLPPAPPPPPFPEGY PA  +E EKG ENQQGE QQP ADPIID GPAKRMKF
Subjt:  RKLPPAPPPPPFPEGYIPAPASEAEKGTENQQGEPQQPPADPIIDHGPAKRMKF

XP_022148297.1 mediator of RNA polymerase II transcription subunit 6 [Momordica charantia]1.7e-13193.31Show/hide
Query:  MTTPPPPAPPPGIGNFEGGPLPAAPQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTGTEYMLNEVME
        M TPPPPA PPGI NFEGGP PAAPQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTGTEYMLNEVME
Subjt:  MTTPPPPAPPPGIGNFEGGPLPAAPQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTGTEYMLNEVME

Query:  PHLFVFRKQKRDGPEKVTPMLTYYILDGSIYQAPQLCNVFAARVSRALYYISKAFTTASSKLEKIGYVDSENESEEVKPGKEAIDFKEVKRVDRILASLQ
        PHLFVFRKQKRDGPEKVTPMLTYYILDGSIYQAPQLCNVFAARVSRALYYISKAFTTASSKLEKIGYVDSENESEEVKPGKE I+FKEVKRVD ILASLQ
Subjt:  PHLFVFRKQKRDGPEKVTPMLTYYILDGSIYQAPQLCNVFAARVSRALYYISKAFTTASSKLEKIGYVDSENESEEVKPGKEAIDFKEVKRVDRILASLQ

Query:  RKLPPAPPPPPFPEGYIPAPASEAEKGTENQQGEPQQPPADPIIDHGPAKRMKF
        RKLPPAPPPPPFPEGY+PAP +E EKG ENQ  E QQP ADPIID GPAKRMKF
Subjt:  RKLPPAPPPPPFPEGYIPAPASEAEKGTENQQGEPQQPPADPIIDHGPAKRMKF

XP_023524903.1 mediator of RNA polymerase II transcription subunit 6 [Cucurbita pepo subsp. pepo]1.5e-13093.7Show/hide
Query:  MTTPPPPAPPPGIGNFEGGPLPAAPQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTGTEYMLNEVME
        M TP    PPPGIGNFEGGP PAAPQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTG EYMLNEVME
Subjt:  MTTPPPPAPPPGIGNFEGGPLPAAPQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTGTEYMLNEVME

Query:  PHLFVFRKQKRDGPEKVTPMLTYYILDGSIYQAPQLCNVFAARVSRALYYISKAFTTASSKLEKIGYVDSENESEEVKPGKEAIDFKEVKRVDRILASLQ
        PHLFVFRKQKRDGPEKVTPMLTYYILDGSIYQAPQLCNVFAARVSRALYYISKAFTTASSKLEKIGYVDSENESEEVKP K  IDFKEVKRVDRILASLQ
Subjt:  PHLFVFRKQKRDGPEKVTPMLTYYILDGSIYQAPQLCNVFAARVSRALYYISKAFTTASSKLEKIGYVDSENESEEVKPGKEAIDFKEVKRVDRILASLQ

Query:  RKLPPAPPPPPFPEGYIPAPASEAEKGTENQQGEPQQPPADPIIDHGPAKRMKF
        RKLPPAPPPPPFPEGY+PAPASEAEKG E+QQGE QQP ADPIID GPAKRMKF
Subjt:  RKLPPAPPPPPFPEGYIPAPASEAEKGTENQQGEPQQPPADPIIDHGPAKRMKF

XP_038896808.1 mediator of RNA polymerase II transcription subunit 6 [Benincasa hispida]2.9e-13192.91Show/hide
Query:  MTTPPPPAPPPGIGNFEGGPLPAAPQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTGTEYMLNEVME
        M TPPPP  PPGIGNFEGGPLPAAPQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTG EYMLNEVME
Subjt:  MTTPPPPAPPPGIGNFEGGPLPAAPQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTGTEYMLNEVME

Query:  PHLFVFRKQKRDGPEKVTPMLTYYILDGSIYQAPQLCNVFAARVSRALYYISKAFTTASSKLEKIGYVDSENESEEVKPGKEAIDFKEVKRVDRILASLQ
        PHLFVFRKQKRDGPEKVTPMLTYYILDGSIYQAPQLCNVFAARVSRALYYISKAFTTASSKLEKIGYVDSENE EEVKP KE I+FKEVKRVD ILASLQ
Subjt:  PHLFVFRKQKRDGPEKVTPMLTYYILDGSIYQAPQLCNVFAARVSRALYYISKAFTTASSKLEKIGYVDSENESEEVKPGKEAIDFKEVKRVDRILASLQ

Query:  RKLPPAPPPPPFPEGYIPAPASEAEKGTENQQGEPQQPPADPIIDHGPAKRMKF
        RKLPPAPPPPPFPEGY PAP +E EKG EN  GE QQPPADPIID GPAKRMKF
Subjt:  RKLPPAPPPPPFPEGYIPAPASEAEKGTENQQGEPQQPPADPIIDHGPAKRMKF

TrEMBL top hitse value%identityAlignment
A0A0A0L8C2 Mediator of RNA polymerase II transcription subunit 61.6e-13092.52Show/hide
Query:  MTTPPPPAPPPGIGNFEGGPLPAAPQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTGTEYMLNEVME
        M TPPPP  PPG GNFEGGPLPAAPQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTG EYMLNEVME
Subjt:  MTTPPPPAPPPGIGNFEGGPLPAAPQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTGTEYMLNEVME

Query:  PHLFVFRKQKRDGPEKVTPMLTYYILDGSIYQAPQLCNVFAARVSRALYYISKAFTTASSKLEKIGYVDSENESEEVKPGKEAIDFKEVKRVDRILASLQ
        PHLFVFRKQKRDGPEKVTPMLTYYILDGSIYQAPQLC+VFAARVSRALYYISKAFTTASSKLEKIGYVDSENESEEVKP KE I+FKEVKRVD ILASLQ
Subjt:  PHLFVFRKQKRDGPEKVTPMLTYYILDGSIYQAPQLCNVFAARVSRALYYISKAFTTASSKLEKIGYVDSENESEEVKPGKEAIDFKEVKRVDRILASLQ

Query:  RKLPPAPPPPPFPEGYIPAPASEAEKGTENQQGEPQQPPADPIIDHGPAKRMKF
        RKLPPAPPPPPFPEGY PA  +E EKG ENQQGE QQP ADPIID GPAKRMKF
Subjt:  RKLPPAPPPPPFPEGYIPAPASEAEKGTENQQGEPQQPPADPIIDHGPAKRMKF

A0A1S3BHR9 Mediator of RNA polymerase II transcription subunit 64.6e-13092.16Show/hide
Query:  MTTPPPP-APPPGIGNFEGGPLPAAPQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTGTEYMLNEVM
        M TPPPP   PPG GNFEGGP+PAAPQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTG EYMLNEVM
Subjt:  MTTPPPP-APPPGIGNFEGGPLPAAPQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTGTEYMLNEVM

Query:  EPHLFVFRKQKRDGPEKVTPMLTYYILDGSIYQAPQLCNVFAARVSRALYYISKAFTTASSKLEKIGYVDSENESEEVKPGKEAIDFKEVKRVDRILASL
        EPHLFVFRKQKRDGPEKVTPMLTYYILDGSIYQAPQLCNVFAARVSRALYYISKAFTTASSKLEKIGYVDSENESEEVKP KE I+FKEVKRVD ILASL
Subjt:  EPHLFVFRKQKRDGPEKVTPMLTYYILDGSIYQAPQLCNVFAARVSRALYYISKAFTTASSKLEKIGYVDSENESEEVKPGKEAIDFKEVKRVDRILASL

Query:  QRKLPPAPPPPPFPEGYIPAPASEAEKGTENQQGEPQQPPADPIIDHGPAKRMKF
        QRKLPPAPPPPPFPEGY PAP ++ EKG ENQQGE QQP ADPIID GPAKRMKF
Subjt:  QRKLPPAPPPPPFPEGYIPAPASEAEKGTENQQGEPQQPPADPIIDHGPAKRMKF

A0A5D3CDR8 Mediator of RNA polymerase II transcription subunit 64.6e-13092.16Show/hide
Query:  MTTPPPP-APPPGIGNFEGGPLPAAPQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTGTEYMLNEVM
        M TPPPP   PPG GNFEGGP+PAAPQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTG EYMLNEVM
Subjt:  MTTPPPP-APPPGIGNFEGGPLPAAPQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTGTEYMLNEVM

Query:  EPHLFVFRKQKRDGPEKVTPMLTYYILDGSIYQAPQLCNVFAARVSRALYYISKAFTTASSKLEKIGYVDSENESEEVKPGKEAIDFKEVKRVDRILASL
        EPHLFVFRKQKRDGPEKVTPMLTYYILDGSIYQAPQLCNVFAARVSRALYYISKAFTTASSKLEKIGYVDSENESEEVKP KE I+FKEVKRVD ILASL
Subjt:  EPHLFVFRKQKRDGPEKVTPMLTYYILDGSIYQAPQLCNVFAARVSRALYYISKAFTTASSKLEKIGYVDSENESEEVKPGKEAIDFKEVKRVDRILASL

Query:  QRKLPPAPPPPPFPEGYIPAPASEAEKGTENQQGEPQQPPADPIIDHGPAKRMKF
        QRKLPPAPPPPPFPEGY PAP ++ EKG ENQQGE QQP ADPIID GPAKRMKF
Subjt:  QRKLPPAPPPPPFPEGYIPAPASEAEKGTENQQGEPQQPPADPIIDHGPAKRMKF

A0A6J1D4P7 Mediator of RNA polymerase II transcription subunit 68.3e-13293.31Show/hide
Query:  MTTPPPPAPPPGIGNFEGGPLPAAPQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTGTEYMLNEVME
        M TPPPPA PPGI NFEGGP PAAPQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTGTEYMLNEVME
Subjt:  MTTPPPPAPPPGIGNFEGGPLPAAPQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTGTEYMLNEVME

Query:  PHLFVFRKQKRDGPEKVTPMLTYYILDGSIYQAPQLCNVFAARVSRALYYISKAFTTASSKLEKIGYVDSENESEEVKPGKEAIDFKEVKRVDRILASLQ
        PHLFVFRKQKRDGPEKVTPMLTYYILDGSIYQAPQLCNVFAARVSRALYYISKAFTTASSKLEKIGYVDSENESEEVKPGKE I+FKEVKRVD ILASLQ
Subjt:  PHLFVFRKQKRDGPEKVTPMLTYYILDGSIYQAPQLCNVFAARVSRALYYISKAFTTASSKLEKIGYVDSENESEEVKPGKEAIDFKEVKRVDRILASLQ

Query:  RKLPPAPPPPPFPEGYIPAPASEAEKGTENQQGEPQQPPADPIIDHGPAKRMKF
        RKLPPAPPPPPFPEGY+PAP +E EKG ENQ  E QQP ADPIID GPAKRMKF
Subjt:  RKLPPAPPPPPFPEGYIPAPASEAEKGTENQQGEPQQPPADPIIDHGPAKRMKF

A0A6J1G911 Mediator of RNA polymerase II transcription subunit 61.6e-13093.7Show/hide
Query:  MTTPPPPAPPPGIGNFEGGPLPAAPQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTGTEYMLNEVME
        M TP    PPPGIGNFEGGP  AAPQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTG EYMLNEVME
Subjt:  MTTPPPPAPPPGIGNFEGGPLPAAPQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTGTEYMLNEVME

Query:  PHLFVFRKQKRDGPEKVTPMLTYYILDGSIYQAPQLCNVFAARVSRALYYISKAFTTASSKLEKIGYVDSENESEEVKPGKEAIDFKEVKRVDRILASLQ
        PHLFVFRKQKRDGPEKVTPMLTYYILDGSIYQAPQLCNVFAARVSRALYYISKAFTTASSKLEKIGYVDSENESEEVKP KE IDFKEVKRVDRILASLQ
Subjt:  PHLFVFRKQKRDGPEKVTPMLTYYILDGSIYQAPQLCNVFAARVSRALYYISKAFTTASSKLEKIGYVDSENESEEVKPGKEAIDFKEVKRVDRILASLQ

Query:  RKLPPAPPPPPFPEGYIPAPASEAEKGTENQQGEPQQPPADPIIDHGPAKRMKF
        RKLPPAPPPPPFPEGY+PAPASEAEKG E+QQGE QQP ADPIID GPAKRMKF
Subjt:  RKLPPAPPPPPFPEGYIPAPASEAEKGTENQQGEPQQPPADPIIDHGPAKRMKF

SwissProt top hitse value%identityAlignment
F4IXJ7 Mediator of RNA polymerase II transcription subunit 68.7e-8661.37Show/hide
Query:  LPAAPQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTGTEYMLNEVMEPHLFVFRKQKRDGPEKVTPM
        +P   QPPGTDMTGI FRDQLW+N+YPLDRN +FDYFALSPFYD TCNNE LR RSIHPLDLS LSKMTG EYML +  EP+LFVFRKQKRDGPEKVTPM
Subjt:  LPAAPQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTGTEYMLNEVMEPHLFVFRKQKRDGPEKVTPM

Query:  LTYYILDGSIYQAPQLCNVFAARVSRALYYISKAFTTASSKLEKI-------------------------------------GY------VDSENESEEV
        LTYYILDGSIYQAPQLC+VFAARVSR +Y ISKAFT A+SKLE I                                     G+       +++NE  E 
Subjt:  LTYYILDGSIYQAPQLCNVFAARVSRALYYISKAFTTASSKLEKI-------------------------------------GY------VDSENESEEV

Query:  KPGKEAIDFKEVKRVDRILASLQRKLPPAPPPPPFPEGYIPAPASEAEKGTENQQGEPQQPPADPIIDHGPAKRMKF
        KP  E +D KE+KRVD IL SL RKL P PPPPPFPEGY+   A   ++    Q GE Q P  DPIID GPAKRMKF
Subjt:  KPGKEAIDFKEVKRVDRILASLQRKLPPAPPPPPFPEGYIPAPASEAEKGTENQQGEPQQPPADPIIDHGPAKRMKF

Q3SZY9 Mediator of RNA polymerase II transcription subunit 62.3e-2236.49Show/hide
Query:  DMTGICFRDQLWLNTYPLDRNLVFDYFA--LSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTGTEYMLNEVMEPHLFVFRKQKRDGPEKVTPMLTYYILDG
        ++ GI + D  W+    L+   V DYF+   +PFYD TCNNE ++M+    L L  L++M G EY+L    EP LF+ RKQ+R  P +V P+  YYI+ G
Subjt:  DMTGICFRDQLWLNTYPLDRNLVFDYFA--LSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTGTEYMLNEVMEPHLFVFRKQKRDGPEKVTPMLTYYILDG

Query:  SIYQAPQLCNVFAARVSRALYYISKAFTTASSKLE---KIGY---VDSENESEEVKP----GKEAIDFKEVKRVDRILASLQRKLPPAPPPPPFPEGYIP
         IYQAP L +V  +RV  A++ I  AF  A S        GY        E ++VKP     +E     + +RVD +L  L++K PP         G  P
Subjt:  SIYQAPQLCNVFAARVSRALYYISKAFTTASSKLE---KIGY---VDSENESEEVKP----GKEAIDFKEVKRVDRILASLQRKLPPAPPPPPFPEGYIP

Query:  APASEAEKGTE
         P  + +K  E
Subjt:  APASEAEKGTE

Q54PN3 Putative mediator of RNA polymerase II transcription subunit 61.8e-2739.27Show/hide
Query:  DMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTGTEYMLNEVMEPHLFVFRKQKRDGPEKVTPMLTYYILDGSI
        D+T + +RD LWL  YPL+   +  YF+ S FYD  CNNEQL+M+    LDLS L  M G EY L + +EP  F+  KQ R  P  V     YY+++G+I
Subjt:  DMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTGTEYMLNEVMEPHLFVFRKQKRDGPEKVTPMLTYYILDGSI

Query:  YQAPQLCNVFAARVSRALYYISKAFTTASSKLE---KIGY---VDSENESEEVK-PGKEAIDFKEVKRVDRILASLQRKLPPAPPPPPFPE
        YQAP+L  VF +RVS+++ ++S+AF + SS +      GY   +D  N+ E+ K         ++ KR+D+++ SL  K P    P   P+
Subjt:  YQAPQLCNVFAARVSRALYYISKAFTTASSKLE---KIGY---VDSENESEEVK-PGKEAIDFKEVKRVDRILASLQRKLPPAPPPPPFPE

Q6IQ63 Mediator of RNA polymerase II transcription subunit 62.0e-2133.77Show/hide
Query:  DMTGICFRDQLWLNTYPLDRNLVFDYFA--LSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTGTEYMLNEVMEPHLFVFRKQKRDGPEKVTPMLTYYILDG
        ++ GI + D  W+    L+ + V +YF+   +PFYD TCNNE ++M+      L  L+++ G EY+L    EP L++ RKQ+R  P +V P+  YYI+ G
Subjt:  DMTGICFRDQLWLNTYPLDRNLVFDYFA--LSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTGTEYMLNEVMEPHLFVFRKQKRDGPEKVTPMLTYYILDG

Query:  SIYQAPQLCNVFAARVSRALYYISKAFTTASSKLE---KIGY---VDSENESEEVKP----GKEAIDFKEVKRVDRILASLQRKLP-------PAPPPPP
         +YQAP L +V ++R   A++ I  AF  A S        GY      + E E VKP     +E     + +RVD +L  L+ K P       P   P P
Subjt:  SIYQAPQLCNVFAARVSRALYYISKAFTTASSKLE---KIGY---VDSENESEEVKP----GKEAIDFKEVKRVDRILASLQRKLP-------PAPPPPP

Query:  FPEGYIPAPASEAEKGTENQQGEPQQPPADP
              P    E  K  E ++ +P  PPA P
Subjt:  FPEGYIPAPASEAEKGTENQQGEPQQPPADP

Q921D4 Mediator of RNA polymerase II transcription subunit 64.7e-2337.44Show/hide
Query:  DMTGICFRDQLWLNTYPLDRNLVFDYFA--LSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTGTEYMLNEVMEPHLFVFRKQKRDGPEKVTPMLTYYILDG
        ++ GI + D  W+    L+   V DYF+   +PFYD TCNNE ++M+    L L  L++M G EY+L    EP LF+ RKQ+R  P +V P+  YYI+ G
Subjt:  DMTGICFRDQLWLNTYPLDRNLVFDYFA--LSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTGTEYMLNEVMEPHLFVFRKQKRDGPEKVTPMLTYYILDG

Query:  SIYQAPQLCNVFAARVSRALYYISKAFTTASSKLE---KIGY---VDSENESEEVKP----GKEAIDFKEVKRVDRILASLQRKLPPAPPPPPFPEGYIP
         IYQAP L +V  +RV  A++ I  AF  A S        GY        E E+VKP     +E     + +RVD +L  L++K PP         G  P
Subjt:  SIYQAPQLCNVFAARVSRALYYISKAFTTASSKLE---KIGY---VDSENESEEVKP----GKEAIDFKEVKRVDRILASLQRKLPPAPPPPPFPEGYIP

Query:  APASEAEKGTE
         P  +A+K  E
Subjt:  APASEAEKGTE

Arabidopsis top hitse value%identityAlignment
AT3G21350.1 RNA polymerase transcriptional regulation mediator-related2.0e-9372.88Show/hide
Query:  LPAAPQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTGTEYMLNEVMEPHLFVFRKQKRDGPEKVTPM
        +P   QPPGTDMTGI FRDQLW+N+YPLDRN +FDYFALSPFYD TCNNE LR RSIHPLDLS LSKMTG EYML +  EP+LFVFRKQKRDGPEKVTPM
Subjt:  LPAAPQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTGTEYMLNEVMEPHLFVFRKQKRDGPEKVTPM

Query:  LTYYILDGSIYQAPQLCNVFAARVSRALYYISKAFTTASSKLEKIGYVDSENESE--EVKPGKEAIDFKEVKRVDRILASLQRKLPPAPPPPPFPEGYIP
        LTYYILDGSIYQAPQLC+VFAARVSR +Y ISKAFT A+SKLE I  VD+EN++E  E KP  E +D KE+KRVD IL SL RKL P PPPPPFPEGY+ 
Subjt:  LTYYILDGSIYQAPQLCNVFAARVSRALYYISKAFTTASSKLEKIGYVDSENESE--EVKPGKEAIDFKEVKRVDRILASLQRKLPPAPPPPPFPEGYIP

Query:  APASEAEKGTENQQGEPQQPPADPIIDHGPAKRMKF
          A   ++    Q GE Q P  DPIID GPAKRMKF
Subjt:  APASEAEKGTENQQGEPQQPPADPIIDHGPAKRMKF

AT3G21350.2 RNA polymerase transcriptional regulation mediator-related6.2e-8761.37Show/hide
Query:  LPAAPQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTGTEYMLNEVMEPHLFVFRKQKRDGPEKVTPM
        +P   QPPGTDMTGI FRDQLW+N+YPLDRN +FDYFALSPFYD TCNNE LR RSIHPLDLS LSKMTG EYML +  EP+LFVFRKQKRDGPEKVTPM
Subjt:  LPAAPQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTGTEYMLNEVMEPHLFVFRKQKRDGPEKVTPM

Query:  LTYYILDGSIYQAPQLCNVFAARVSRALYYISKAFTTASSKLEKI-------------------------------------GY------VDSENESEEV
        LTYYILDGSIYQAPQLC+VFAARVSR +Y ISKAFT A+SKLE I                                     G+       +++NE  E 
Subjt:  LTYYILDGSIYQAPQLCNVFAARVSRALYYISKAFTTASSKLEKI-------------------------------------GY------VDSENESEEV

Query:  KPGKEAIDFKEVKRVDRILASLQRKLPPAPPPPPFPEGYIPAPASEAEKGTENQQGEPQQPPADPIIDHGPAKRMKF
        KP  E +D KE+KRVD IL SL RKL P PPPPPFPEGY+   A   ++    Q GE Q P  DPIID GPAKRMKF
Subjt:  KPGKEAIDFKEVKRVDRILASLQRKLPPAPPPPPFPEGYIPAPASEAEKGTENQQGEPQQPPADPIIDHGPAKRMKF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACAACTCCACCGCCACCGGCGCCGCCTCCGGGGATCGGGAATTTTGAGGGGGGTCCTCTGCCGGCAGCGCCTCAGCCGCCAGGCACGGACATGACCGGAATTTGCTT
CAGAGACCAACTCTGGCTCAATACTTACCCTCTCGATCGGAACCTGGTTTTCGATTACTTCGCCTTGTCCCCTTTCTACGACTGGACTTGCAACAACGAACAACTCAGAA
TGCGCTCCATTCACCCCCTCGATCTCTCTCAACTCTCAAAAATGACAGGGACAGAGTACATGTTGAATGAAGTTATGGAGCCTCACCTTTTCGTTTTCCGAAAGCAAAAG
AGGGATGGTCCTGAGAAAGTCACACCAATGCTGACTTATTATATCTTGGATGGTTCAATTTACCAGGCGCCTCAGCTTTGCAATGTTTTTGCTGCCCGAGTTAGCCGGGC
ACTATATTACATATCGAAGGCCTTTACCACTGCTTCCTCAAAGTTGGAGAAGATTGGATATGTTGATTCTGAAAATGAAAGTGAAGAAGTAAAACCTGGAAAAGAGGCCA
TTGACTTTAAGGAAGTAAAGCGAGTTGATCGTATTCTTGCATCCTTACAGCGCAAGCTGCCACCTGCCCCACCACCCCCACCATTTCCAGAAGGTTATATTCCTGCTCCT
GCATCAGAAGCAGAAAAAGGCACTGAAAACCAGCAAGGAGAGCCGCAACAGCCTCCAGCAGATCCCATTATTGACCACGGCCCTGCTAAAAGGATGAAATTTTGA
mRNA sequenceShow/hide mRNA sequence
GTTAATCTAGTGCTTCATCAGCCTCTCCCATTGTTCGACTTGTGGGGTAATCACTCTGCCAGGAGGGATCTGTAAATTCGACACCTTTCGGAAAAGTGAAATCTCACAAA
AATGACAACTCCACCGCCACCGGCGCCGCCTCCGGGGATCGGGAATTTTGAGGGGGGTCCTCTGCCGGCAGCGCCTCAGCCGCCAGGCACGGACATGACCGGAATTTGCT
TCAGAGACCAACTCTGGCTCAATACTTACCCTCTCGATCGGAACCTGGTTTTCGATTACTTCGCCTTGTCCCCTTTCTACGACTGGACTTGCAACAACGAACAACTCAGA
ATGCGCTCCATTCACCCCCTCGATCTCTCTCAACTCTCAAAAATGACAGGGACAGAGTACATGTTGAATGAAGTTATGGAGCCTCACCTTTTCGTTTTCCGAAAGCAAAA
GAGGGATGGTCCTGAGAAAGTCACACCAATGCTGACTTATTATATCTTGGATGGTTCAATTTACCAGGCGCCTCAGCTTTGCAATGTTTTTGCTGCCCGAGTTAGCCGGG
CACTATATTACATATCGAAGGCCTTTACCACTGCTTCCTCAAAGTTGGAGAAGATTGGATATGTTGATTCTGAAAATGAAAGTGAAGAAGTAAAACCTGGAAAAGAGGCC
ATTGACTTTAAGGAAGTAAAGCGAGTTGATCGTATTCTTGCATCCTTACAGCGCAAGCTGCCACCTGCCCCACCACCCCCACCATTTCCAGAAGGTTATATTCCTGCTCC
TGCATCAGAAGCAGAAAAAGGCACTGAAAACCAGCAAGGAGAGCCGCAACAGCCTCCAGCAGATCCCATTATTGACCACGGCCCTGCTAAAAGGATGAAATTTTGAAAAC
GAGTTTATGCTACGTTCTCCATCCAAGTTGTGAAGAATCAGCCTTGTGAAAAGGCTCTAATTATAGACTTTAGTTGATGGATTCATTGTTCTAGCAGTAACTTGTACTAT
ATGACTGACAATAACAATGACTTCCTGGTTTTGTCAGCTAGAAGTTAGAACTGCTTGATACACATGTATCATTTCTTTACTGTAAGGGGCTGATTGAGGCATTGAATGGA
CTATAATAATAGGGGTTGTAATAGTATGTGGTTATTATAATTTGTGGATTCATATAATATTATTTAAAATGTAGAATAGTATAGTTTGAGGTTATAATAGTCCGTCTTTG
AGGTGTAGAGTATAACACGTGTCCCAAACAGACTCCACAAGTCTTTACCATTGATGTTGCAACTGGTGCAACTCATGTCTCGT
Protein sequenceShow/hide protein sequence
MTTPPPPAPPPGIGNFEGGPLPAAPQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTGTEYMLNEVMEPHLFVFRKQK
RDGPEKVTPMLTYYILDGSIYQAPQLCNVFAARVSRALYYISKAFTTASSKLEKIGYVDSENESEEVKPGKEAIDFKEVKRVDRILASLQRKLPPAPPPPPFPEGYIPAP
ASEAEKGTENQQGEPQQPPADPIIDHGPAKRMKF