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Tan0017513 (gene) of Snake gourd v1 genome

Gene IDTan0017513
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionBromo domain-containing protein
Genome locationLG09:4745934..4747781
RNA-Seq ExpressionTan0017513
SyntenyTan0017513
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ONI36261.1 hypothetical protein PRUPE_1G578800 [Prunus persica]8.2e-4144.76Show/hide
Query:  LGQRKVRGPTRNLKLVKLPRGIRFEVSWRNKRPVGDNADIFKAQCTILARQVNFTPLQVKSWRAIDTTTKRKLFELTLERFKVEGRETSVLLQIHRSYNN
        +G+R+ RGPTRNLKL ++P G RFE+SWRN+R VG+++  FKA+CT L RQ    PLQVKSW+ I    K+K FE  L+RFKVE   T VL QIHRSY+N
Subjt:  LGQRKVRGPTRNLKLVKLPRGIRFEVSWRNKRPVGDNADIFKAQCTILARQVNFTPLQVKSWRAIDTTTKRKLFELTLERFKVEGRETSVLLQIHRSYNN

Query:  WRDSLKKKWLYKYETIAEALANIPKEITRDDAEYLAKLWKSTEY--------------------------QVRE-----TNKEPSRIRIWELTHLRNNGI
        +R  LKK W    ET  EA   +P  +  DD +YL  LW S E+                          Q+RE     T  +P R  +WELTH+R +G+
Subjt:  WRDSLKKKWLYKYETIAEALANIPKEITRDDAEYLAKLWKSTEY--------------------------QVRE-----TNKEPSRIRIWELTHLRNNGI

Query:  AVNETTQEKM
        A N  +QE +
Subjt:  AVNETTQEKM

VVA15493.1 PREDICTED: bromodomain-containing [Prunus dulcis]6.3e-4145.24Show/hide
Query:  LGQRKVRGPTRNLKLVKLPRGIRFEVSWRNKRPVGDNADIFKAQCTILARQVNFTPLQVKSWRAIDTTTKRKLFELTLERFKVEGRETSVLLQIHRSYNN
        +G+R+ RGPTRNLKL ++P G RFE+SWRN+R VGD++ IFK++CT L RQ    PLQVKSW+ I    K+K FE  L+RFKVE   T VL QIHRSY+N
Subjt:  LGQRKVRGPTRNLKLVKLPRGIRFEVSWRNKRPVGDNADIFKAQCTILARQVNFTPLQVKSWRAIDTTTKRKLFELTLERFKVEGRETSVLLQIHRSYNN

Query:  WRDSLKKKWLYKYETIAEALANIPKEITRDDAEYLAKLWKSTEY--------------------------QVRE-----TNKEPSRIRIWELTHLRNNGI
        +R  LKK W    ET  EA   IP  +  DD +YL  +W S E+                          Q+RE     T  +P R  +WELTH+R +G+
Subjt:  WRDSLKKKWLYKYETIAEALANIPKEITRDDAEYLAKLWKSTEY--------------------------QVRE-----TNKEPSRIRIWELTHLRNNGI

Query:  AVNETTQEKM
        A N  +QE +
Subjt:  AVNETTQEKM

XP_020999494.1 uncharacterized protein LOC107489344 [Arachis duranensis]3.7e-4148.62Show/hide
Query:  FFLGQRKVRGPTRNLKLVKLPRGIRFEVSWRNKRPVGDNADIFKAQCTILARQVNFTPLQVKSWRAIDTTTKRKLFELTLERFKVEGRETSVLLQIHRSY
        F   ++KVRGPTRNL+L KLP G R +++WR  RPVG NA +FK++CT+L R V   PL+VK W  I    K K+F+L L  FKVEGR+  V  Q++ SY
Subjt:  FFLGQRKVRGPTRNLKLVKLPRGIRFEVSWRNKRPVGDNADIFKAQCTILARQVNFTPLQVKSWRAIDTTTKRKLFELTLERFKVEGRETSVLLQIHRSY

Query:  NNWRDSLKKKWLYKYETIAEALANIPKEITRDDAEYLAKLWKSTEYQVRETNKEPSRIRIWELTHLRNNGIAVNETTQEKM
         ++R  LKK++   Y+    A ANIP E+ ++D +YL  LW    +Q  +T +E  R+R+WELTH R NG A NE TQEK+
Subjt:  NNWRDSLKKKWLYKYETIAEALANIPKEITRDDAEYLAKLWKSTEYQVRETNKEPSRIRIWELTHLRNNGIAVNETTQEKM

XP_021824621.1 uncharacterized protein LOC110765722 [Prunus avium]4.8e-4143.81Show/hide
Query:  LGQRKVRGPTRNLKLVKLPRGIRFEVSWRNKRPVGDNADIFKAQCTILARQVNFTPLQVKSWRAIDTTTKRKLFELTLERFKVEGRETSVLLQIHRSYNN
        +G+R+ RGPTRNLKL ++P G RFE+SWRN+R VG+++  FKA+CT L RQ    PLQVKSW+ I    K+K FE  L+RFKVE   T VL QIHRSY+N
Subjt:  LGQRKVRGPTRNLKLVKLPRGIRFEVSWRNKRPVGDNADIFKAQCTILARQVNFTPLQVKSWRAIDTTTKRKLFELTLERFKVEGRETSVLLQIHRSYNN

Query:  WRDSLKKKWLYKYETIAEALANIPKEITRDDAEYLAKLWKSTEYQV-------------------------------RETNKEPSRIRIWELTHLRNNGI
        +R  LKK W    ET  EA   +P  +  DD +YL  LW S E+Q+                               ++T  +P R  +WELTH+R +G+
Subjt:  WRDSLKKKWLYKYETIAEALANIPKEITRDDAEYLAKLWKSTEYQV-------------------------------RETNKEPSRIRIWELTHLRNNGI

Query:  AVNETTQEKM
        A N  +QE +
Subjt:  AVNETTQEKM

XP_034224143.1 uncharacterized protein LOC117634252 [Prunus dulcis]6.3e-4145.24Show/hide
Query:  LGQRKVRGPTRNLKLVKLPRGIRFEVSWRNKRPVGDNADIFKAQCTILARQVNFTPLQVKSWRAIDTTTKRKLFELTLERFKVEGRETSVLLQIHRSYNN
        +G+R+ RGPTRNLKL ++P G RFE+SWRN+R VGD++ IFK++CT L RQ    PLQVKSW+ I    K+K FE  L+RFKVE   T VL QIHRSY+N
Subjt:  LGQRKVRGPTRNLKLVKLPRGIRFEVSWRNKRPVGDNADIFKAQCTILARQVNFTPLQVKSWRAIDTTTKRKLFELTLERFKVEGRETSVLLQIHRSYNN

Query:  WRDSLKKKWLYKYETIAEALANIPKEITRDDAEYLAKLWKSTEY--------------------------QVRE-----TNKEPSRIRIWELTHLRNNGI
        +R  LKK W    ET  EA   IP  +  DD +YL  +W S E+                          Q+RE     T  +P R  +WELTH+R +G+
Subjt:  WRDSLKKKWLYKYETIAEALANIPKEITRDDAEYLAKLWKSTEY--------------------------QVRE-----TNKEPSRIRIWELTHLRNNGI

Query:  AVNETTQEKM
        A N  +QE +
Subjt:  AVNETTQEKM

TrEMBL top hitse value%identityAlignment
A0A5E4EIH2 PREDICTED: bromodomain-containing3.1e-4145.24Show/hide
Query:  LGQRKVRGPTRNLKLVKLPRGIRFEVSWRNKRPVGDNADIFKAQCTILARQVNFTPLQVKSWRAIDTTTKRKLFELTLERFKVEGRETSVLLQIHRSYNN
        +G+R+ RGPTRNLKL ++P G RFE+SWRN+R VGD++ IFK++CT L RQ    PLQVKSW+ I    K+K FE  L+RFKVE   T VL QIHRSY+N
Subjt:  LGQRKVRGPTRNLKLVKLPRGIRFEVSWRNKRPVGDNADIFKAQCTILARQVNFTPLQVKSWRAIDTTTKRKLFELTLERFKVEGRETSVLLQIHRSYNN

Query:  WRDSLKKKWLYKYETIAEALANIPKEITRDDAEYLAKLWKSTEY--------------------------QVRE-----TNKEPSRIRIWELTHLRNNGI
        +R  LKK W    ET  EA   IP  +  DD +YL  +W S E+                          Q+RE     T  +P R  +WELTH+R +G+
Subjt:  WRDSLKKKWLYKYETIAEALANIPKEITRDDAEYLAKLWKSTEY--------------------------QVRE-----TNKEPSRIRIWELTHLRNNGI

Query:  AVNETTQEKM
        A N  +QE +
Subjt:  AVNETTQEKM

A0A5E4F8D3 PREDICTED: bromodomain-containing4.0e-4144.76Show/hide
Query:  LGQRKVRGPTRNLKLVKLPRGIRFEVSWRNKRPVGDNADIFKAQCTILARQVNFTPLQVKSWRAIDTTTKRKLFELTLERFKVEGRETSVLLQIHRSYNN
        +G+R+ RGPTRNLKL ++P G RFE+SWRN+R VG+++  FKA+CT L RQ    PLQVKSW+ I    K+K FE  L+RFKVE   T VL QIHRSY+N
Subjt:  LGQRKVRGPTRNLKLVKLPRGIRFEVSWRNKRPVGDNADIFKAQCTILARQVNFTPLQVKSWRAIDTTTKRKLFELTLERFKVEGRETSVLLQIHRSYNN

Query:  WRDSLKKKWLYKYETIAEALANIPKEITRDDAEYLAKLWKSTEY--------------------------QVRE-----TNKEPSRIRIWELTHLRNNGI
        +R  LKK W    ET  EA   +P  +  DD +YL  LW S E+                          Q+RE     T  +P R  +WELTH+R +G+
Subjt:  WRDSLKKKWLYKYETIAEALANIPKEITRDDAEYLAKLWKSTEY--------------------------QVRE-----TNKEPSRIRIWELTHLRNNGI

Query:  AVNETTQEKM
        A N  +QE +
Subjt:  AVNETTQEKM

A0A6J5TUZ6 Bromo domain-containing protein4.0e-4144.76Show/hide
Query:  LGQRKVRGPTRNLKLVKLPRGIRFEVSWRNKRPVGDNADIFKAQCTILARQVNFTPLQVKSWRAIDTTTKRKLFELTLERFKVEGRETSVLLQIHRSYNN
        +G+R+ RGPTRNLKL ++P G RFE+SWRN+R VG+++  FKA+CT L RQ    PLQVKSW+ I    K+K FE  L+RFKVE   T VL QIHRSY+N
Subjt:  LGQRKVRGPTRNLKLVKLPRGIRFEVSWRNKRPVGDNADIFKAQCTILARQVNFTPLQVKSWRAIDTTTKRKLFELTLERFKVEGRETSVLLQIHRSYNN

Query:  WRDSLKKKWLYKYETIAEALANIPKEITRDDAEYLAKLWKSTEY--------------------------QVRE-----TNKEPSRIRIWELTHLRNNGI
        +R  LKK W    ET  EA   +P  +  DD +YL  LW S E+                          Q+RE     T  +P R  +WELTH+R +G+
Subjt:  WRDSLKKKWLYKYETIAEALANIPKEITRDDAEYLAKLWKSTEY--------------------------QVRE-----TNKEPSRIRIWELTHLRNNGI

Query:  AVNETTQEKM
        A N  +QE +
Subjt:  AVNETTQEKM

A0A6P5NRP6 uncharacterized protein LOC1074893441.8e-4148.62Show/hide
Query:  FFLGQRKVRGPTRNLKLVKLPRGIRFEVSWRNKRPVGDNADIFKAQCTILARQVNFTPLQVKSWRAIDTTTKRKLFELTLERFKVEGRETSVLLQIHRSY
        F   ++KVRGPTRNL+L KLP G R +++WR  RPVG NA +FK++CT+L R V   PL+VK W  I    K K+F+L L  FKVEGR+  V  Q++ SY
Subjt:  FFLGQRKVRGPTRNLKLVKLPRGIRFEVSWRNKRPVGDNADIFKAQCTILARQVNFTPLQVKSWRAIDTTTKRKLFELTLERFKVEGRETSVLLQIHRSY

Query:  NNWRDSLKKKWLYKYETIAEALANIPKEITRDDAEYLAKLWKSTEYQVRETNKEPSRIRIWELTHLRNNGIAVNETTQEKM
         ++R  LKK++   Y+    A ANIP E+ ++D +YL  LW    +Q  +T +E  R+R+WELTH R NG A NE TQEK+
Subjt:  NNWRDSLKKKWLYKYETIAEALANIPKEITRDDAEYLAKLWKSTEYQVRETNKEPSRIRIWELTHLRNNGIAVNETTQEKM

A0A6P5TBL4 uncharacterized protein LOC1107657222.3e-4143.81Show/hide
Query:  LGQRKVRGPTRNLKLVKLPRGIRFEVSWRNKRPVGDNADIFKAQCTILARQVNFTPLQVKSWRAIDTTTKRKLFELTLERFKVEGRETSVLLQIHRSYNN
        +G+R+ RGPTRNLKL ++P G RFE+SWRN+R VG+++  FKA+CT L RQ    PLQVKSW+ I    K+K FE  L+RFKVE   T VL QIHRSY+N
Subjt:  LGQRKVRGPTRNLKLVKLPRGIRFEVSWRNKRPVGDNADIFKAQCTILARQVNFTPLQVKSWRAIDTTTKRKLFELTLERFKVEGRETSVLLQIHRSYNN

Query:  WRDSLKKKWLYKYETIAEALANIPKEITRDDAEYLAKLWKSTEYQV-------------------------------RETNKEPSRIRIWELTHLRNNGI
        +R  LKK W    ET  EA   +P  +  DD +YL  LW S E+Q+                               ++T  +P R  +WELTH+R +G+
Subjt:  WRDSLKKKWLYKYETIAEALANIPKEITRDDAEYLAKLWKSTEYQV-------------------------------RETNKEPSRIRIWELTHLRNNGI

Query:  AVNETTQEKM
        A N  +QE +
Subjt:  AVNETTQEKM

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAAGCTCCTCATCACATAAAGCAAAGATCAAATTCAATAATGGAAATAGTGTGGATAGTCATGAGAATAGCACGACTACATCTACTTGCAATCAAATAGTTGATGA
TCGGCAATCTTCAAAGAAAATCAAAAACAAAAGTTGGTATAGAAGCTTCATCATCGTTTACGAGGAGAAATTGGATCAACACAAGTTGGTCATAAAAAGTTTAATCTTCT
TTTTAGGTCAAAGAAAAGTACGTGGTCCCACACGTAATCTCAAACTGGTTAAATTACCTCGTGGGATTAGATTTGAAGTATCATGGAGGAACAAAAGACCAGTTGGAGAT
AATGCTGATATTTTCAAAGCCCAATGCACTATCTTAGCTCGACAAGTCAATTTTACTCCTCTACAAGTGAAAAGTTGGAGAGCTATTGATACAACAACAAAAAGAAAGCT
ATTTGAGCTTACATTGGAGCGGTTTAAAGTTGAAGGTCGTGAGACTTCAGTGTTGCTTCAAATTCATCGTTCTTATAATAATTGGAGAGATAGCTTAAAGAAAAAATGGT
TGTACAAATATGAAACAATTGCAGAAGCTTTGGCCAATATTCCAAAAGAAATTACAAGAGATGATGCAGAATATCTTGCAAAGTTGTGGAAGTCAACTGAATATCAGGTT
CGGGAAACTAATAAAGAACCTAGTCGAATCAGAATTTGGGAGCTAACGCATTTGAGAAATAATGGAATTGCTGTGAATGAAACTACTCAAGAAAAAATGGTGAGGGAGTG
A
mRNA sequenceShow/hide mRNA sequence
ATGAAAAGCTCCTCATCACATAAAGCAAAGATCAAATTCAATAATGGAAATAGTGTGGATAGTCATGAGAATAGCACGACTACATCTACTTGCAATCAAATAGTTGATGA
TCGGCAATCTTCAAAGAAAATCAAAAACAAAAGTTGGTATAGAAGCTTCATCATCGTTTACGAGGAGAAATTGGATCAACACAAGTTGGTCATAAAAAGTTTAATCTTCT
TTTTAGGTCAAAGAAAAGTACGTGGTCCCACACGTAATCTCAAACTGGTTAAATTACCTCGTGGGATTAGATTTGAAGTATCATGGAGGAACAAAAGACCAGTTGGAGAT
AATGCTGATATTTTCAAAGCCCAATGCACTATCTTAGCTCGACAAGTCAATTTTACTCCTCTACAAGTGAAAAGTTGGAGAGCTATTGATACAACAACAAAAAGAAAGCT
ATTTGAGCTTACATTGGAGCGGTTTAAAGTTGAAGGTCGTGAGACTTCAGTGTTGCTTCAAATTCATCGTTCTTATAATAATTGGAGAGATAGCTTAAAGAAAAAATGGT
TGTACAAATATGAAACAATTGCAGAAGCTTTGGCCAATATTCCAAAAGAAATTACAAGAGATGATGCAGAATATCTTGCAAAGTTGTGGAAGTCAACTGAATATCAGGTT
CGGGAAACTAATAAAGAACCTAGTCGAATCAGAATTTGGGAGCTAACGCATTTGAGAAATAATGGAATTGCTGTGAATGAAACTACTCAAGAAAAAATGGTGAGGGAGTG
A
Protein sequenceShow/hide protein sequence
MKSSSSHKAKIKFNNGNSVDSHENSTTTSTCNQIVDDRQSSKKIKNKSWYRSFIIVYEEKLDQHKLVIKSLIFFLGQRKVRGPTRNLKLVKLPRGIRFEVSWRNKRPVGD
NADIFKAQCTILARQVNFTPLQVKSWRAIDTTTKRKLFELTLERFKVEGRETSVLLQIHRSYNNWRDSLKKKWLYKYETIAEALANIPKEITRDDAEYLAKLWKSTEYQV
RETNKEPSRIRIWELTHLRNNGIAVNETTQEKMVRE