; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0017524 (gene) of Snake gourd v1 genome

Gene IDTan0017524
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionGlycine-rich cell wall structural protein-like
Genome locationLG01:18926423..18929438
RNA-Seq ExpressionTan0017524
SyntenyTan0017524
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0065824.1 glycine-rich cell wall structural protein-like [Cucumis melo var. makuwa]9.7e-0565.28Show/hide
Query:  MACKLLFLMLLGAFVCAT-GARKLVQDPLKDEKFYH-----GGGLGGGGGGGF--GGGGGLGGGYGGGSGGG
        MA K++FL+ LGAF+ +T GARKL     +DEKF+H     GGGLGGGGGGGF  GGGGGLGGG GGG GGG
Subjt:  MACKLLFLMLLGAFVCAT-GARKLVQDPLKDEKFYH-----GGGLGGGGGGGF--GGGGGLGGGYGGGSGGG

KAA0065825.1 glycine-rich cell wall structural protein-like [Cucumis melo var. makuwa]1.3e-0465.28Show/hide
Query:  MACKLLFLMLLGAFVCAT-GARKLVQDPLKDEKFYH-----GGGLGGGGGGGF--GGGGGLGGGYGGGSGGG
        MA K++FL+ LGAF+  T GARKL     +DEKF+H     GGGLGGGGGGGF  GGGGGLGGG GGG GGG
Subjt:  MACKLLFLMLLGAFVCAT-GARKLVQDPLKDEKFYH-----GGGLGGGGGGGF--GGGGGLGGGYGGGSGGG

PON62699.1 hypothetical protein PanWU01x14_136110 [Parasponia andersonii]1.7e-0461.97Show/hide
Query:  MACKLLFLMLLGAFVCATGARKL--VQDPLKDEK-FYH----GGGLGGGGGGGFGGGGGLGGGYGGGSGGG
        M C++L L+L+GAF+C++ ARKL   +    DEK F H    GGGLGGGGGGGFGGGGGLGGG G G+GGG
Subjt:  MACKLLFLMLLGAFVCATGARKL--VQDPLKDEK-FYH----GGGLGGGGGGGFGGGGGLGGGYGGGSGGG

PON91943.1 hypothetical protein TorRG33x02_122740 [Trema orientale]2.2e-0461.97Show/hide
Query:  MACKLLFLMLLGAFVCATGARKL--VQDPLKDEK-FYH----GGGLGGGGGGGFGGGGGLGGGYGGGSGGG
        M C++L L+L+GAF+C + ARKL   +    DEK F H    GGGLGGGGGGGFGGGGGLGGG G G+GGG
Subjt:  MACKLLFLMLLGAFVCATGARKL--VQDPLKDEK-FYH----GGGLGGGGGGGFGGGGGLGGGYGGGSGGG

XP_031737995.1 glycine-rich protein 5 [Cucumis sativus]1.0e-1484.38Show/hide
Query:  MACKLLFLMLLGAFVCATGARKLVQDPLKDEKFYHGGGLGGGGGGGFGGGGGLGGGYGGGSGGG
        MACKL FLMLLG F CATGARKL  DPLKDEKF+HGGGLGGGGGGG GGGGG GGG+GGGSG G
Subjt:  MACKLLFLMLLGAFVCATGARKLVQDPLKDEKFYHGGGLGGGGGGGFGGGGGLGGGYGGGSGGG

TrEMBL top hitse value%identityAlignment
A0A0A0L4Y2 Uncharacterized protein5.0e-1584.38Show/hide
Query:  MACKLLFLMLLGAFVCATGARKLVQDPLKDEKFYHGGGLGGGGGGGFGGGGGLGGGYGGGSGGG
        MACKL FLMLLG F CATGARKL  DPLKDEKF+HGGGLGGGGGGG GGGGG GGG+GGGSG G
Subjt:  MACKLLFLMLLGAFVCATGARKLVQDPLKDEKFYHGGGLGGGGGGGFGGGGGLGGGYGGGSGGG

A0A1D1XMI6 Uncharacterized protein (Fragment)3.6e-0567.65Show/hide
Query:  MACKLLFLMLLGAFVCATGARKL-VQDPLKDEKFY-HGGGLGG--GGGGGFGGGGGLGGGYGGGSGGG
        M+ KLLFL+LL A  C + +R+L   +PLKDEK+Y HGGGLGG  GGGGG GGG GLGGGYGGG+GGG
Subjt:  MACKLLFLMLLGAFVCATGARKL-VQDPLKDEKFY-HGGGLGG--GGGGGFGGGGGLGGGYGGGSGGG

A0A2P5CNS2 Uncharacterized protein8.0e-0561.97Show/hide
Query:  MACKLLFLMLLGAFVCATGARKL--VQDPLKDEK-FYH----GGGLGGGGGGGFGGGGGLGGGYGGGSGGG
        M C++L L+L+GAF+C++ ARKL   +    DEK F H    GGGLGGGGGGGFGGGGGLGGG G G+GGG
Subjt:  MACKLLFLMLLGAFVCATGARKL--VQDPLKDEK-FYH----GGGLGGGGGGGFGGGGGLGGGYGGGSGGG

A0A5A7VJD1 Glycine-rich cell wall structural protein-like6.1e-0565.28Show/hide
Query:  MACKLLFLMLLGAFVCAT-GARKLVQDPLKDEKFYH-----GGGLGGGGGGGF--GGGGGLGGGYGGGSGGG
        MA K++FL+ LGAF+  T GARKL     +DEKF+H     GGGLGGGGGGGF  GGGGGLGGG GGG GGG
Subjt:  MACKLLFLMLLGAFVCAT-GARKLVQDPLKDEKFYH-----GGGLGGGGGGGF--GGGGGLGGGYGGGSGGG

A0A5D3BB90 Glycine-rich cell wall structural protein-like4.7e-0565.28Show/hide
Query:  MACKLLFLMLLGAFVCAT-GARKLVQDPLKDEKFYH-----GGGLGGGGGGGF--GGGGGLGGGYGGGSGGG
        MA K++FL+ LGAF+ +T GARKL     +DEKF+H     GGGLGGGGGGGF  GGGGGLGGG GGG GGG
Subjt:  MACKLLFLMLLGAFVCAT-GARKLVQDPLKDEKFYH-----GGGLGGGGGGGF--GGGGGLGGGYGGGSGGG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTGTAAGCTTCTCTTTCTCATGCTCCTTGGTGCCTTTGTTTGCGCCACTGGAGCTCGAAAGCTCGTCCAAGATCCTTTAAAGGATGAGAAATTTTACCATGGTGG
TGGATTAGGTGGTGGAGGTGGTGGCGGATTCGGCGGAGGCGGAGGGCTTGGCGGTGGTTATGGAGGAGGATCCGGTGGTGGTGAGGTTTTGGAGGTGGATATGGTTCAGG
GTTCGGAGGTGGTGGACTTGGAGGAGGTGGCGGTGGAGGGTATGGTGGTGGCGGCGGAGGATACGGTGGAGGCTCCGGAGCCGGTGGCGGATTTGGAGGATTTCCTTGAA
CTAATTAATAGTACCGTTTTCCATACTAAGAACAAGTCACTTGCTAGTTTACTACTTGTGCAATTTAGAGATGAGCATCCTTCGAGTGGCGATGATTTTGAGCTCAAATT
GGCATCGATTACTGACAAATAA
mRNA sequenceShow/hide mRNA sequence
ATGGCTTGTAAGCTTCTCTTTCTCATGCTCCTTGGTGCCTTTGTTTGCGCCACTGGAGCTCGAAAGCTCGTCCAAGATCCTTTAAAGGATGAGAAATTTTACCATGGTGG
TGGATTAGGTGGTGGAGGTGGTGGCGGATTCGGCGGAGGCGGAGGGCTTGGCGGTGGTTATGGAGGAGGATCCGGTGGTGGTGAGGTTTTGGAGGTGGATATGGTTCAGG
GTTCGGAGGTGGTGGACTTGGAGGAGGTGGCGGTGGAGGGTATGGTGGTGGCGGCGGAGGATACGGTGGAGGCTCCGGAGCCGGTGGCGGATTTGGAGGATTTCCTTGAA
CTAATTAATAGTACCGTTTTCCATACTAAGAACAAGTCACTTGCTAGTTTACTACTTGTGCAATTTAGAGATGAGCATCCTTCGAGTGGCGATGATTTTGAGCTCAAATT
GGCATCGATTACTGACAAATAA
Protein sequenceShow/hide protein sequence
MACKLLFLMLLGAFVCATGARKLVQDPLKDEKFYHGGGLGGGGGGGFGGGGGLGGGYGGGSGGGEVLEVDMVQGSEVVDLEEVAVEGMVVAAEDTVEAPEPVADLEDFLE
LINSTVFHTKNKSLASLLLVQFRDEHPSSGDDFELKLASITDK