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Tan0017540 (gene) of Snake gourd v1 genome

Gene IDTan0017540
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionABC transporter C family member 2
Genome locationLG10:26280991..26281347
RNA-Seq ExpressionTan0017540
SyntenyTan0017540
Gene Ontology termsGO:0055085 - transmembrane transport (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0005524 - ATP binding (molecular function)
GO:0140359 - ABC-type transmembrane transporter activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_038877680.1 ABC transporter C family member 2-like [Benincasa hispida]2.2e-4986.61Show/hide
Query:  MAFEPFVWYCRPVIGGVWTNAVENAFGAYTPCAIDSLVVVISHLIVLGLCIYRIWLIKKDFQVQRFSLKSKIYNYVLCLLAAYCVFEPLFKLIVGVSVLN
        M FEPFVWYCRPV GGVWTNAV NAFGAYTPCAIDS V+VISHL+VLGLCIYRIWLIKKDF+VQRF LKS IYNYVLCLLAAYC FEPL KLI+G+SVLN
Subjt:  MAFEPFVWYCRPVIGGVWTNAVENAFGAYTPCAIDSLVVVISHLIVLGLCIYRIWLIKKDFQVQRFSLKSKIYNYVLCLLAAYCVFEPLFKLIVGVSVLN

Query:  LDGQVALAPFEV
        LD Q ALAPFEV
Subjt:  LDGQVALAPFEV

XP_038887071.1 ABC transporter C family member 2-like [Benincasa hispida]6.5e-4984.82Show/hide
Query:  MAFEPFVWYCRPVIGGVWTNAVENAFGAYTPCAIDSLVVVISHLIVLGLCIYRIWLIKKDFQVQRFSLKSKIYNYVLCLLAAYCVFEPLFKLIVGVSVLN
        M FEPFVWYCRP++GGVWTNAVENAFGAYTPC IDSLVV ISHL+VLGLCIYRIWL+KK+F VQRF LKSKIYNYVLCLLAAYC F PL+KLI+G+SVLN
Subjt:  MAFEPFVWYCRPVIGGVWTNAVENAFGAYTPCAIDSLVVVISHLIVLGLCIYRIWLIKKDFQVQRFSLKSKIYNYVLCLLAAYCVFEPLFKLIVGVSVLN

Query:  LDGQVALAPFEV
        LDGQ ALA FEV
Subjt:  LDGQVALAPFEV

XP_038887873.1 ABC transporter C family member 2-like isoform X1 [Benincasa hispida]3.8e-4984.82Show/hide
Query:  MAFEPFVWYCRPVIGGVWTNAVENAFGAYTPCAIDSLVVVISHLIVLGLCIYRIWLIKKDFQVQRFSLKSKIYNYVLCLLAAYCVFEPLFKLIVGVSVLN
        M FEPFVWYCRP++ GVWTNAVENAFGAYTPC IDSLVV ISHL+VLGLCIYRIWL+KK+F VQRF LKSKIYNYVLCLLAAYC F PL+KLI+G+SVLN
Subjt:  MAFEPFVWYCRPVIGGVWTNAVENAFGAYTPCAIDSLVVVISHLIVLGLCIYRIWLIKKDFQVQRFSLKSKIYNYVLCLLAAYCVFEPLFKLIVGVSVLN

Query:  LDGQVALAPFEV
        LDGQ ALAPFEV
Subjt:  LDGQVALAPFEV

XP_038887874.1 ABC transporter C family member 2-like isoform X2 [Benincasa hispida]3.8e-4984.82Show/hide
Query:  MAFEPFVWYCRPVIGGVWTNAVENAFGAYTPCAIDSLVVVISHLIVLGLCIYRIWLIKKDFQVQRFSLKSKIYNYVLCLLAAYCVFEPLFKLIVGVSVLN
        M FEPFVWYCRP++ GVWTNAVENAFGAYTPC IDSLVV ISHL+VLGLCIYRIWL+KK+F VQRF LKSKIYNYVLCLLAAYC F PL+KLI+G+SVLN
Subjt:  MAFEPFVWYCRPVIGGVWTNAVENAFGAYTPCAIDSLVVVISHLIVLGLCIYRIWLIKKDFQVQRFSLKSKIYNYVLCLLAAYCVFEPLFKLIVGVSVLN

Query:  LDGQVALAPFEV
        LDGQ ALAPFEV
Subjt:  LDGQVALAPFEV

XP_038887875.1 ABC transporter C family member 2-like isoform X3 [Benincasa hispida]3.8e-4984.82Show/hide
Query:  MAFEPFVWYCRPVIGGVWTNAVENAFGAYTPCAIDSLVVVISHLIVLGLCIYRIWLIKKDFQVQRFSLKSKIYNYVLCLLAAYCVFEPLFKLIVGVSVLN
        M FEPFVWYCRP++ GVWTNAVENAFGAYTPC IDSLVV ISHL+VLGLCIYRIWL+KK+F VQRF LKSKIYNYVLCLLAAYC F PL+KLI+G+SVLN
Subjt:  MAFEPFVWYCRPVIGGVWTNAVENAFGAYTPCAIDSLVVVISHLIVLGLCIYRIWLIKKDFQVQRFSLKSKIYNYVLCLLAAYCVFEPLFKLIVGVSVLN

Query:  LDGQVALAPFEV
        LDGQ ALAPFEV
Subjt:  LDGQVALAPFEV

TrEMBL top hitse value%identityAlignment
A0A0A0KDY1 Uncharacterized protein5.9e-4884.82Show/hide
Query:  MAFEPFVWYCRPVIGGVWTNAVENAFGAYTPCAIDSLVVVISHLIVLGLCIYRIWLIKKDFQVQRFSLKSKIYNYVLCLLAAYCVFEPLFKLIVGVSVLN
        MAF+PF WYCRPV GGVW NAV+NAFGAYTPCAIDSLVVVISHL+VLGLCIYRIWLIKKDF+VQRF LKS  YNYVLCLLA  C FEPL KLI+G+SVLN
Subjt:  MAFEPFVWYCRPVIGGVWTNAVENAFGAYTPCAIDSLVVVISHLIVLGLCIYRIWLIKKDFQVQRFSLKSKIYNYVLCLLAAYCVFEPLFKLIVGVSVLN

Query:  LDGQVALAPFEV
        LDGQ ALAPFEV
Subjt:  LDGQVALAPFEV

A0A1S3BCT7 ABC transporter C family member 2-like1.6e-4884.82Show/hide
Query:  MAFEPFVWYCRPVIGGVWTNAVENAFGAYTPCAIDSLVVVISHLIVLGLCIYRIWLIKKDFQVQRFSLKSKIYNYVLCLLAAYCVFEPLFKLIVGVSVLN
        MAF+PF WYCRPV+GGVWTNAV+NAFGAYTPCAIDSLVVVISHL+VLGLCIYRIWLI KDF+VQRF LKS  YNYVLCLLA  C FEPL KLI+G+SVLN
Subjt:  MAFEPFVWYCRPVIGGVWTNAVENAFGAYTPCAIDSLVVVISHLIVLGLCIYRIWLIKKDFQVQRFSLKSKIYNYVLCLLAAYCVFEPLFKLIVGVSVLN

Query:  LDGQVALAPFEV
        LDGQ ALAPFEV
Subjt:  LDGQVALAPFEV

A0A5D3C025 ABC transporter C family member 2-like1.6e-4884.82Show/hide
Query:  MAFEPFVWYCRPVIGGVWTNAVENAFGAYTPCAIDSLVVVISHLIVLGLCIYRIWLIKKDFQVQRFSLKSKIYNYVLCLLAAYCVFEPLFKLIVGVSVLN
        MAF+PF WYCRPV+GGVWTNAV+NAFGAYTPCAIDSLVVVISHL+VLGLCIYRIWLI KDF+VQRF LKS  YNYVLCLLA  C FEPL KLI+G+SVLN
Subjt:  MAFEPFVWYCRPVIGGVWTNAVENAFGAYTPCAIDSLVVVISHLIVLGLCIYRIWLIKKDFQVQRFSLKSKIYNYVLCLLAAYCVFEPLFKLIVGVSVLN

Query:  LDGQVALAPFEV
        LDGQ ALAPFEV
Subjt:  LDGQVALAPFEV

A0A6J1EES4 ABC transporter C family member 24.1e-4985.71Show/hide
Query:  MAFEPFVWYCRPVIGGVWTNAVENAFGAYTPCAIDSLVVVISHLIVLGLCIYRIWLIKKDFQVQRFSLKSKIYNYVLCLLAAYCVFEPLFKLIVGVSVLN
        MAFEPFVWYCRPV GGVWT AVENA GAYTPCAIDS+V+VISHL++LGLCI RIWLIKKDF+ QRF LKSKIYNYVLCLLAAYCVFEPL++LI G+SVLN
Subjt:  MAFEPFVWYCRPVIGGVWTNAVENAFGAYTPCAIDSLVVVISHLIVLGLCIYRIWLIKKDFQVQRFSLKSKIYNYVLCLLAAYCVFEPLFKLIVGVSVLN

Query:  LDGQVALAPFEV
        LDGQ ALAPFEV
Subjt:  LDGQVALAPFEV

A0A6J1KUZ1 ABC transporter C family member 2-like4.1e-4985.71Show/hide
Query:  MAFEPFVWYCRPVIGGVWTNAVENAFGAYTPCAIDSLVVVISHLIVLGLCIYRIWLIKKDFQVQRFSLKSKIYNYVLCLLAAYCVFEPLFKLIVGVSVLN
        MAFEPFVWYCRPV GGVWT AVENA GAYTPCAIDS+V+VISHL++LGLCI RIWLIKKDF+ QRF LKSKIYNYVLCLLAAYCVFEPL++LI G+SVLN
Subjt:  MAFEPFVWYCRPVIGGVWTNAVENAFGAYTPCAIDSLVVVISHLIVLGLCIYRIWLIKKDFQVQRFSLKSKIYNYVLCLLAAYCVFEPLFKLIVGVSVLN

Query:  LDGQVALAPFEV
        LDGQ ALAPFEV
Subjt:  LDGQVALAPFEV

SwissProt top hitse value%identityAlignment
Q42093 ABC transporter C family member 24.0e-3362.16Show/hide
Query:  MAFEPFVWYCRPVIGGVWTNAVENAFGAYTPCAIDSLVVVISHLIVLGLCIYRIWLIKKDFQVQRFSLKSKIYNYVLCLLAAYCVFEPLFKLIVGVSVLN
        M FE   WYC+PV  GVWT  V NAFGAYTPCA DS V+ IS L++L LC+YRIWL  KD +V+RF L+S++YNY L LLAAY   EPLF+LI+G+SVL+
Subjt:  MAFEPFVWYCRPVIGGVWTNAVENAFGAYTPCAIDSLVVVISHLIVLGLCIYRIWLIKKDFQVQRFSLKSKIYNYVLCLLAAYCVFEPLFKLIVGVSVLN

Query:  LDGQVALAPFE
         DG   L PFE
Subjt:  LDGQVALAPFE

Q9C8G9 ABC transporter C family member 12.0e-3259.46Show/hide
Query:  MAFEPFVWYCRPVIGGVWTNAVENAFGAYTPCAIDSLVVVISHLIVLGLCIYRIWLIKKDFQVQRFSLKSKIYNYVLCLLAAYCVFEPLFKLIVGVSVLN
        M FEP  WYC+PV  GVWT  V+ AFGAYTPCAIDS V+ ISHL++L LC+YR+WLI KD +V +F L+SK ++Y L LLAAY   EPLF+L++ +SVL+
Subjt:  MAFEPFVWYCRPVIGGVWTNAVENAFGAYTPCAIDSLVVVISHLIVLGLCIYRIWLIKKDFQVQRFSLKSKIYNYVLCLLAAYCVFEPLFKLIVGVSVLN

Query:  LDGQVALAPFE
        LDG     P+E
Subjt:  LDGQVALAPFE

Q9C8H0 ABC transporter C family member 124.8e-3153.57Show/hide
Query:  MAFEPFVWYCRPVIGGVWTNAVENAFGAYTPCAIDSLVVVISHLIVLGLCIYRIWLIKKDFQVQRFSLKSKIYNYVLCLLAAYCVFEPLFKLIVGVSVLN
        M FE   WYC+PV  G W  AV+ AFGAYTPCAIDSLV+++SH ++LGLC YRIW+I  + + Q + L+ K YN VL LLA YCV EP+ +L++G+S+ +
Subjt:  MAFEPFVWYCRPVIGGVWTNAVENAFGAYTPCAIDSLVVVISHLIVLGLCIYRIWLIKKDFQVQRFSLKSKIYNYVLCLLAAYCVFEPLFKLIVGVSVLN

Query:  LDGQVALAPFEV
        +D +    PFEV
Subjt:  LDGQVALAPFEV

Q9C8H1 ABC transporter C family member 111.4e-2545.54Show/hide
Query:  MAFEPFVWYCRPVIGGVWTNAVENAFGAYTPCAIDSLVVVISHLIVLGLCIYRIWLIKKDFQVQRFSLKSKIYNYVLCLLAAYCVFEPLFKLIVGVSVLN
        M FE   WYC+P+  G W    + AFGAYTPCAIDSLV+++S+ ++LGLC YRIW+   + + Q + L+   Y+ VL +LA  CV EP+ +L++G+S+ +
Subjt:  MAFEPFVWYCRPVIGGVWTNAVENAFGAYTPCAIDSLVVVISHLIVLGLCIYRIWLIKKDFQVQRFSLKSKIYNYVLCLLAAYCVFEPLFKLIVGVSVLN

Query:  LDGQVALAPFEV
        +  +  L PFEV
Subjt:  LDGQVALAPFEV

Arabidopsis top hitse value%identityAlignment
AT1G30400.1 multidrug resistance-associated protein 11.4e-3359.46Show/hide
Query:  MAFEPFVWYCRPVIGGVWTNAVENAFGAYTPCAIDSLVVVISHLIVLGLCIYRIWLIKKDFQVQRFSLKSKIYNYVLCLLAAYCVFEPLFKLIVGVSVLN
        M FEP  WYC+PV  GVWT  V+ AFGAYTPCAIDS V+ ISHL++L LC+YR+WLI KD +V +F L+SK ++Y L LLAAY   EPLF+L++ +SVL+
Subjt:  MAFEPFVWYCRPVIGGVWTNAVENAFGAYTPCAIDSLVVVISHLIVLGLCIYRIWLIKKDFQVQRFSLKSKIYNYVLCLLAAYCVFEPLFKLIVGVSVLN

Query:  LDGQVALAPFE
        LDG     P+E
Subjt:  LDGQVALAPFE

AT1G30400.2 multidrug resistance-associated protein 11.4e-3359.46Show/hide
Query:  MAFEPFVWYCRPVIGGVWTNAVENAFGAYTPCAIDSLVVVISHLIVLGLCIYRIWLIKKDFQVQRFSLKSKIYNYVLCLLAAYCVFEPLFKLIVGVSVLN
        M FEP  WYC+PV  GVWT  V+ AFGAYTPCAIDS V+ ISHL++L LC+YR+WLI KD +V +F L+SK ++Y L LLAAY   EPLF+L++ +SVL+
Subjt:  MAFEPFVWYCRPVIGGVWTNAVENAFGAYTPCAIDSLVVVISHLIVLGLCIYRIWLIKKDFQVQRFSLKSKIYNYVLCLLAAYCVFEPLFKLIVGVSVLN

Query:  LDGQVALAPFE
        LDG     P+E
Subjt:  LDGQVALAPFE

AT1G30420.1 multidrug resistance-associated protein 129.7e-2745.54Show/hide
Query:  MAFEPFVWYCRPVIGGVWTNAVENAFGAYTPCAIDSLVVVISHLIVLGLCIYRIWLIKKDFQVQRFSLKSKIYNYVLCLLAAYCVFEPLFKLIVGVSVLN
        M FE   WYC+P+  G W    + AFGAYTPCAIDSLV+++S+ ++LGLC YRIW+   + + Q + L+   Y+ VL +LA  CV EP+ +L++G+S+ +
Subjt:  MAFEPFVWYCRPVIGGVWTNAVENAFGAYTPCAIDSLVVVISHLIVLGLCIYRIWLIKKDFQVQRFSLKSKIYNYVLCLLAAYCVFEPLFKLIVGVSVLN

Query:  LDGQVALAPFEV
        +  +  L PFEV
Subjt:  LDGQVALAPFEV

AT2G34660.1 multidrug resistance-associated protein 22.8e-3462.16Show/hide
Query:  MAFEPFVWYCRPVIGGVWTNAVENAFGAYTPCAIDSLVVVISHLIVLGLCIYRIWLIKKDFQVQRFSLKSKIYNYVLCLLAAYCVFEPLFKLIVGVSVLN
        M FE   WYC+PV  GVWT  V NAFGAYTPCA DS V+ IS L++L LC+YRIWL  KD +V+RF L+S++YNY L LLAAY   EPLF+LI+G+SVL+
Subjt:  MAFEPFVWYCRPVIGGVWTNAVENAFGAYTPCAIDSLVVVISHLIVLGLCIYRIWLIKKDFQVQRFSLKSKIYNYVLCLLAAYCVFEPLFKLIVGVSVLN

Query:  LDGQVALAPFE
         DG   L PFE
Subjt:  LDGQVALAPFE

AT2G34660.2 multidrug resistance-associated protein 22.8e-3462.16Show/hide
Query:  MAFEPFVWYCRPVIGGVWTNAVENAFGAYTPCAIDSLVVVISHLIVLGLCIYRIWLIKKDFQVQRFSLKSKIYNYVLCLLAAYCVFEPLFKLIVGVSVLN
        M FE   WYC+PV  GVWT  V NAFGAYTPCA DS V+ IS L++L LC+YRIWL  KD +V+RF L+S++YNY L LLAAY   EPLF+LI+G+SVL+
Subjt:  MAFEPFVWYCRPVIGGVWTNAVENAFGAYTPCAIDSLVVVISHLIVLGLCIYRIWLIKKDFQVQRFSLKSKIYNYVLCLLAAYCVFEPLFKLIVGVSVLN

Query:  LDGQVALAPFE
         DG   L PFE
Subjt:  LDGQVALAPFE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTTTGAGCCGTTTGTTTGGTATTGTCGTCCTGTTATTGGTGGTGTGTGGACGAATGCAGTGGAGAATGCTTTTGGTGCTTACACACCATGTGCCATTGACTCTCT
GGTGGTTGTTATTTCTCACCTGATTGTTCTAGGCCTATGTATCTACAGAATATGGCTGATCAAGAAGGATTTTCAAGTACAAAGGTTTTCTTTGAAGTCAAAGATATACA
ATTACGTGCTATGTTTATTGGCTGCTTACTGTGTATTTGAGCCTTTATTTAAATTGATCGTGGGAGTTTCAGTCTTGAATTTAGATGGGCAGGTTGCACTTGCCCCATTC
GAGGTAGAGTTTCCTTACAATACATAG
mRNA sequenceShow/hide mRNA sequence
ATGGCTTTTGAGCCGTTTGTTTGGTATTGTCGTCCTGTTATTGGTGGTGTGTGGACGAATGCAGTGGAGAATGCTTTTGGTGCTTACACACCATGTGCCATTGACTCTCT
GGTGGTTGTTATTTCTCACCTGATTGTTCTAGGCCTATGTATCTACAGAATATGGCTGATCAAGAAGGATTTTCAAGTACAAAGGTTTTCTTTGAAGTCAAAGATATACA
ATTACGTGCTATGTTTATTGGCTGCTTACTGTGTATTTGAGCCTTTATTTAAATTGATCGTGGGAGTTTCAGTCTTGAATTTAGATGGGCAGGTTGCACTTGCCCCATTC
GAGGTAGAGTTTCCTTACAATACATAG
Protein sequenceShow/hide protein sequence
MAFEPFVWYCRPVIGGVWTNAVENAFGAYTPCAIDSLVVVISHLIVLGLCIYRIWLIKKDFQVQRFSLKSKIYNYVLCLLAAYCVFEPLFKLIVGVSVLNLDGQVALAPF
EVEFPYNT