| GenBank top hits | e value | %identity | Alignment |
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| TYJ98274.1 transcription elongation factor B polypeptide 3 isoform X2 [Cucumis melo var. makuwa] | 2.4e-113 | 93.33 | Show/hide |
Query: MYRVTKIPSLVDLCVNKAIDNLRFLGDVGETDFHLLERILPHCTVDQLMHVEKSSEGRDLTPVTDKLWKKFYERQFGRENTNTVIERMQQKRVAFRWIQL
MYRV KIPSLVDLCVNKAIDN+RFLGDVGETD HLLERILPHCTVDQLMHVEKSSEGRDLTPVTDKLWKKFYERQFG+E+T TVIERM+QKRVAFRWIQL
Subjt: MYRVTKIPSLVDLCVNKAIDNLRFLGDVGETDFHLLERILPHCTVDQLMHVEKSSEGRDLTPVTDKLWKKFYERQFGRENTNTVIERMQQKRVAFRWIQL
Query: YEAKMKDIEKNESKAADRIKQSYLKENARKQSRQIQICSKVPPSSNKRSFGGTGYGCNVANTKNKLLKKAKIEVLQSQEMKNIKAWRRNAVQKSSDIPST
YEAKM+DIEKNESKAADRIKQSYLKENARKQSRQIQICSKVPPSSNKRSFGG+GYG NVANTKNK+LKKAKIEVLQSQEMKNIKAWRRNAVQKSSDIPST
Subjt: YEAKMKDIEKNESKAADRIKQSYLKENARKQSRQIQICSKVPPSSNKRSFGGTGYGCNVANTKNKLLKKAKIEVLQSQEMKNIKAWRRNAVQKSSDIPST
Query: KKPMFSGRDSASTSKNTTTHMARRW
KKPMF GR+SASTSKNT+THMA+RW
Subjt: KKPMFSGRDSASTSKNTTTHMARRW
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| XP_004143189.1 transcription elongation factor B polypeptide 3 isoform X1 [Cucumis sativus] | 7.1e-113 | 93.33 | Show/hide |
Query: MYRVTKIPSLVDLCVNKAIDNLRFLGDVGETDFHLLERILPHCTVDQLMHVEKSSEGRDLTPVTDKLWKKFYERQFGRENTNTVIERMQQKRVAFRWIQL
MYRV KIPSLVDLCVNKAIDNLRFLGDVGETD HLL+RILPHCTVDQLMHVEKSSEGRDLTPVTDKLWKKFYERQFG+E+T TVIERM+QKRVAFRWIQL
Subjt: MYRVTKIPSLVDLCVNKAIDNLRFLGDVGETDFHLLERILPHCTVDQLMHVEKSSEGRDLTPVTDKLWKKFYERQFGRENTNTVIERMQQKRVAFRWIQL
Query: YEAKMKDIEKNESKAADRIKQSYLKENARKQSRQIQICSKVPPSSNKRSFGGTGYGCNVANTKNKLLKKAKIEVLQSQEMKNIKAWRRNAVQKSSDIPST
YEAKM+DIEKNESKAADRIKQSYLKENARKQSRQIQICSKVPPSSNKRSFGG+GYG NVANTKNK+LKKAKIEVLQSQEMKNIKAWRRNAVQKSSDI ST
Subjt: YEAKMKDIEKNESKAADRIKQSYLKENARKQSRQIQICSKVPPSSNKRSFGGTGYGCNVANTKNKLLKKAKIEVLQSQEMKNIKAWRRNAVQKSSDIPST
Query: KKPMFSGRDSASTSKNTTTHMARRW
KKPMFSGR+SASTSKNT+THMA+RW
Subjt: KKPMFSGRDSASTSKNTTTHMARRW
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| XP_008456387.2 PREDICTED: transcription elongation factor B polypeptide 3 isoform X1 [Cucumis melo] | 4.6e-112 | 93.3 | Show/hide |
Query: MYRVTKIPSLVDLCVNKAIDNLRFLGDVGETDFHLLERILPHCTVDQLMHVEKSSEGRDLTPVTDKLWKKFYERQFGRENTNTVIERMQQKRVAFRWIQL
MYRV KIPSLVDLCVNKAIDN+RFLGDVGETD HLLERILPHCTVDQLMHVEKSSEGRDLTPVTDKLWKKFYERQFG+E+T TVIERM+QKRVAFRWIQL
Subjt: MYRVTKIPSLVDLCVNKAIDNLRFLGDVGETDFHLLERILPHCTVDQLMHVEKSSEGRDLTPVTDKLWKKFYERQFGRENTNTVIERMQQKRVAFRWIQL
Query: YEAKMKDIEKNESKAADRIKQSYLKENARKQSRQIQICSKVPPSSNKRSFGGTGYGCNVANTKNKLLKKAKIEVLQSQEMKNIKAWRRNAVQKSSDIPST
YEAKM+DIEKNESKAADRIKQSYLKENARKQSRQIQICSKVPPSSNKRSFGG+GYG NVANTKNK+LKKAKIEVLQSQEMKNIKAWRRNAVQKSSDIPST
Subjt: YEAKMKDIEKNESKAADRIKQSYLKENARKQSRQIQICSKVPPSSNKRSFGGTGYGCNVANTKNKLLKKAKIEVLQSQEMKNIKAWRRNAVQKSSDIPST
Query: KKPMFSGRDSASTSKNTTTHMARR
KKPMF GR+SASTSKNT+THMA+R
Subjt: KKPMFSGRDSASTSKNTTTHMARR
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| XP_016901950.1 PREDICTED: transcription elongation factor B polypeptide 3 isoform X2 [Cucumis melo] | 4.6e-112 | 93.3 | Show/hide |
Query: MYRVTKIPSLVDLCVNKAIDNLRFLGDVGETDFHLLERILPHCTVDQLMHVEKSSEGRDLTPVTDKLWKKFYERQFGRENTNTVIERMQQKRVAFRWIQL
MYRV KIPSLVDLCVNKAIDN+RFLGDVGETD HLLERILPHCTVDQLMHVEKSSEGRDLTPVTDKLWKKFYERQFG+E+T TVIERM+QKRVAFRWIQL
Subjt: MYRVTKIPSLVDLCVNKAIDNLRFLGDVGETDFHLLERILPHCTVDQLMHVEKSSEGRDLTPVTDKLWKKFYERQFGRENTNTVIERMQQKRVAFRWIQL
Query: YEAKMKDIEKNESKAADRIKQSYLKENARKQSRQIQICSKVPPSSNKRSFGGTGYGCNVANTKNKLLKKAKIEVLQSQEMKNIKAWRRNAVQKSSDIPST
YEAKM+DIEKNESKAADRIKQSYLKENARKQSRQIQICSKVPPSSNKRSFGG+GYG NVANTKNK+LKKAKIEVLQSQEMKNIKAWRRNAVQKSSDIPST
Subjt: YEAKMKDIEKNESKAADRIKQSYLKENARKQSRQIQICSKVPPSSNKRSFGGTGYGCNVANTKNKLLKKAKIEVLQSQEMKNIKAWRRNAVQKSSDIPST
Query: KKPMFSGRDSASTSKNTTTHMARR
KKPMF GR+SASTSKNT+THMA+R
Subjt: KKPMFSGRDSASTSKNTTTHMARR
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| XP_038900478.1 transcription elongation factor B polypeptide 3-like isoform X1 [Benincasa hispida] | 1.7e-111 | 92.44 | Show/hide |
Query: MYRVTKIPSLVDLCVNKAIDNLRFLGDVGETDFHLLERILPHCTVDQLMHVEKSSEGRDLTPVTDKLWKKFYERQFGRENTNTVIERMQQKRVAFRWIQL
MYRV KIPSLVDLCVNKAIDNLRFLGDVGETD HLL+RILPHCTVDQLMHVEKSSEGRDLTP+TDKLWKKFYERQFG+E+T TVIERM+QKRVAFRWIQL
Subjt: MYRVTKIPSLVDLCVNKAIDNLRFLGDVGETDFHLLERILPHCTVDQLMHVEKSSEGRDLTPVTDKLWKKFYERQFGRENTNTVIERMQQKRVAFRWIQL
Query: YEAKMKDIEKNESKAADRIKQSYLKENARKQSRQIQICSKVPPSSNKRSFGGTGYGCNVANTKNKLLKKAKIEVLQSQEMKNIKAWRRNAVQKSSDIPST
YEAKMKDIEKNESKAADRIKQSY KENARKQSRQIQICSKVPPSSNKRSFGG+ YG NVANTKNK+LKKAKIEVLQSQEMKNIKAWRRNAVQKSSDIPST
Subjt: YEAKMKDIEKNESKAADRIKQSYLKENARKQSRQIQICSKVPPSSNKRSFGGTGYGCNVANTKNKLLKKAKIEVLQSQEMKNIKAWRRNAVQKSSDIPST
Query: KKPMFSGRDSASTSKNTTTHMARRW
KKPMFSGR+SASTSKNT+T MA+RW
Subjt: KKPMFSGRDSASTSKNTTTHMARRW
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A1S3C4D6 transcription elongation factor B polypeptide 3 isoform X1 | 2.2e-112 | 93.3 | Show/hide |
Query: MYRVTKIPSLVDLCVNKAIDNLRFLGDVGETDFHLLERILPHCTVDQLMHVEKSSEGRDLTPVTDKLWKKFYERQFGRENTNTVIERMQQKRVAFRWIQL
MYRV KIPSLVDLCVNKAIDN+RFLGDVGETD HLLERILPHCTVDQLMHVEKSSEGRDLTPVTDKLWKKFYERQFG+E+T TVIERM+QKRVAFRWIQL
Subjt: MYRVTKIPSLVDLCVNKAIDNLRFLGDVGETDFHLLERILPHCTVDQLMHVEKSSEGRDLTPVTDKLWKKFYERQFGRENTNTVIERMQQKRVAFRWIQL
Query: YEAKMKDIEKNESKAADRIKQSYLKENARKQSRQIQICSKVPPSSNKRSFGGTGYGCNVANTKNKLLKKAKIEVLQSQEMKNIKAWRRNAVQKSSDIPST
YEAKM+DIEKNESKAADRIKQSYLKENARKQSRQIQICSKVPPSSNKRSFGG+GYG NVANTKNK+LKKAKIEVLQSQEMKNIKAWRRNAVQKSSDIPST
Subjt: YEAKMKDIEKNESKAADRIKQSYLKENARKQSRQIQICSKVPPSSNKRSFGGTGYGCNVANTKNKLLKKAKIEVLQSQEMKNIKAWRRNAVQKSSDIPST
Query: KKPMFSGRDSASTSKNTTTHMARR
KKPMF GR+SASTSKNT+THMA+R
Subjt: KKPMFSGRDSASTSKNTTTHMARR
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| A0A1S4E1U0 transcription elongation factor B polypeptide 3 isoform X2 | 2.2e-112 | 93.3 | Show/hide |
Query: MYRVTKIPSLVDLCVNKAIDNLRFLGDVGETDFHLLERILPHCTVDQLMHVEKSSEGRDLTPVTDKLWKKFYERQFGRENTNTVIERMQQKRVAFRWIQL
MYRV KIPSLVDLCVNKAIDN+RFLGDVGETD HLLERILPHCTVDQLMHVEKSSEGRDLTPVTDKLWKKFYERQFG+E+T TVIERM+QKRVAFRWIQL
Subjt: MYRVTKIPSLVDLCVNKAIDNLRFLGDVGETDFHLLERILPHCTVDQLMHVEKSSEGRDLTPVTDKLWKKFYERQFGRENTNTVIERMQQKRVAFRWIQL
Query: YEAKMKDIEKNESKAADRIKQSYLKENARKQSRQIQICSKVPPSSNKRSFGGTGYGCNVANTKNKLLKKAKIEVLQSQEMKNIKAWRRNAVQKSSDIPST
YEAKM+DIEKNESKAADRIKQSYLKENARKQSRQIQICSKVPPSSNKRSFGG+GYG NVANTKNK+LKKAKIEVLQSQEMKNIKAWRRNAVQKSSDIPST
Subjt: YEAKMKDIEKNESKAADRIKQSYLKENARKQSRQIQICSKVPPSSNKRSFGGTGYGCNVANTKNKLLKKAKIEVLQSQEMKNIKAWRRNAVQKSSDIPST
Query: KKPMFSGRDSASTSKNTTTHMARR
KKPMF GR+SASTSKNT+THMA+R
Subjt: KKPMFSGRDSASTSKNTTTHMARR
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| A0A5D3BGR1 Transcription elongation factor B polypeptide 3 isoform X2 | 1.2e-113 | 93.33 | Show/hide |
Query: MYRVTKIPSLVDLCVNKAIDNLRFLGDVGETDFHLLERILPHCTVDQLMHVEKSSEGRDLTPVTDKLWKKFYERQFGRENTNTVIERMQQKRVAFRWIQL
MYRV KIPSLVDLCVNKAIDN+RFLGDVGETD HLLERILPHCTVDQLMHVEKSSEGRDLTPVTDKLWKKFYERQFG+E+T TVIERM+QKRVAFRWIQL
Subjt: MYRVTKIPSLVDLCVNKAIDNLRFLGDVGETDFHLLERILPHCTVDQLMHVEKSSEGRDLTPVTDKLWKKFYERQFGRENTNTVIERMQQKRVAFRWIQL
Query: YEAKMKDIEKNESKAADRIKQSYLKENARKQSRQIQICSKVPPSSNKRSFGGTGYGCNVANTKNKLLKKAKIEVLQSQEMKNIKAWRRNAVQKSSDIPST
YEAKM+DIEKNESKAADRIKQSYLKENARKQSRQIQICSKVPPSSNKRSFGG+GYG NVANTKNK+LKKAKIEVLQSQEMKNIKAWRRNAVQKSSDIPST
Subjt: YEAKMKDIEKNESKAADRIKQSYLKENARKQSRQIQICSKVPPSSNKRSFGGTGYGCNVANTKNKLLKKAKIEVLQSQEMKNIKAWRRNAVQKSSDIPST
Query: KKPMFSGRDSASTSKNTTTHMARRW
KKPMF GR+SASTSKNT+THMA+RW
Subjt: KKPMFSGRDSASTSKNTTTHMARRW
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| A0A6J1G8W9 transcription elongation factor B polypeptide 3 isoform X1 | 2.7e-110 | 91.11 | Show/hide |
Query: MYRVTKIPSLVDLCVNKAIDNLRFLGDVGETDFHLLERILPHCTVDQLMHVEKSSEGRDLTPVTDKLWKKFYERQFGRENTNTVIERMQQKRVAFRWIQL
MY V K+PSLVDLCV KAIDNLRFLGDVGETD HLLERILPHCTVDQLMHVEKSSEGRDLTPVTDKLWKKFYERQFGRENTN V ERMQ+K+VAFRWIQL
Subjt: MYRVTKIPSLVDLCVNKAIDNLRFLGDVGETDFHLLERILPHCTVDQLMHVEKSSEGRDLTPVTDKLWKKFYERQFGRENTNTVIERMQQKRVAFRWIQL
Query: YEAKMKDIEKNESKAADRIKQSYLKENARKQSRQIQICSKVPPSSNKRSFGGTGYGCNVANTKNKLLKKAKIEVLQSQEMKNIKAWRRNAVQKSSDIPST
YEAKMKDIEKNES+AADRIKQSYLKENARKQSRQIQICSKVPP+SNKRSFG GYG NV NTKNKLLKK+KIEVLQSQEMKNIKAWRRNAVQK+ DIPST
Subjt: YEAKMKDIEKNESKAADRIKQSYLKENARKQSRQIQICSKVPPSSNKRSFGGTGYGCNVANTKNKLLKKAKIEVLQSQEMKNIKAWRRNAVQKSSDIPST
Query: KKPMFSGRDSASTSKNTTTHMARRW
KKPMFSGRDSASTSK+TTTHMAR+W
Subjt: KKPMFSGRDSASTSKNTTTHMARRW
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| A0A6J1I1I3 transcription elongation factor B polypeptide 3 isoform X1 | 1.0e-109 | 90.67 | Show/hide |
Query: MYRVTKIPSLVDLCVNKAIDNLRFLGDVGETDFHLLERILPHCTVDQLMHVEKSSEGRDLTPVTDKLWKKFYERQFGRENTNTVIERMQQKRVAFRWIQL
MY V K+PSLVDLCV KAIDNLRFLGDVGETD HLLERILPHCTVDQLMHVEKSSEGRDLTPVTDKLWKKFYERQFGRE+TN V ERMQ+K+VAFRWIQL
Subjt: MYRVTKIPSLVDLCVNKAIDNLRFLGDVGETDFHLLERILPHCTVDQLMHVEKSSEGRDLTPVTDKLWKKFYERQFGRENTNTVIERMQQKRVAFRWIQL
Query: YEAKMKDIEKNESKAADRIKQSYLKENARKQSRQIQICSKVPPSSNKRSFGGTGYGCNVANTKNKLLKKAKIEVLQSQEMKNIKAWRRNAVQKSSDIPST
YEAKMKDIEKNES+AADRIKQSYLKENARKQSRQIQICSKVPP+SNKRSFG GYG NV NTKNKLLKK+KIEVLQSQEMKNIKAWRRNAVQK+ DIPST
Subjt: YEAKMKDIEKNESKAADRIKQSYLKENARKQSRQIQICSKVPPSSNKRSFGGTGYGCNVANTKNKLLKKAKIEVLQSQEMKNIKAWRRNAVQKSSDIPST
Query: KKPMFSGRDSASTSKNTTTHMARRW
KKPMFSGRDSASTSK+TTTHMAR+W
Subjt: KKPMFSGRDSASTSKNTTTHMARRW
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| Arabidopsis top hits | e value | %identity | Alignment |
|---|
| AT2G42780.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: regulation of transcription; LOCATED IN: integral to membrane, nucleus; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: RNA polymerase II transcription factor SIII, subunit A (InterPro:IPR010684); Has 187 Blast hits to 186 proteins in 77 species: Archae - 0; Bacteria - 0; Metazoa - 104; Fungi - 29; Plants - 38; Viruses - 0; Other Eukaryotes - 16 (source: NCBI BLink). | 9.1e-50 | 47.89 | Show/hide |
Query: KIPSLVDLCVNKAIDNLRFLGDVGETDFHLLERILPHCTVDQLMHVEKSSEGRDLTPVTDKLWKKFYERQFGRENTNTVIERMQQKRV-AFRWIQLYEAK
K PSLVDLCV KAIDN++++G VG DF LLE+IL HCT++QL H+E +++ DL+P+TDK WK FY++ +G E+ +IE ++ +V F+W LYE K
Subjt: KIPSLVDLCVNKAIDNLRFLGDVGETDFHLLERILPHCTVDQLMHVEKSSEGRDLTPVTDKLWKKFYERQFGRENTNTVIERMQQKRV-AFRWIQLYEAK
Query: MKDIEKNESKAADRIKQSYLKENARKQSRQIQICSKVPPSSNKRSF-GGTGYGCNVANTKNKLLKKAKIEVLQSQEMKNIKAWRRNAVQKSSDIPSTKKP
+ +++ E + R+K+ Y EN RKQSRQ ++CSK PPS KR F G + G N+ + K+ ++KKAKI++L+SQE+KN+ A +RN +QKS I + KK
Subjt: MKDIEKNESKAADRIKQSYLKENARKQSRQIQICSKVPPSSNKRSF-GGTGYGCNVANTKNKLLKKAKIEVLQSQEMKNIKAWRRNAVQKSSDIPSTKKP
Query: MFSGRDSASTSKN
S +S STS++
Subjt: MFSGRDSASTSKN
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| AT2G42780.2 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: regulation of transcription; LOCATED IN: integral to membrane, nucleus; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: RNA polymerase II transcription factor SIII, subunit A (InterPro:IPR010684). | 4.5e-49 | 46.95 | Show/hide |
Query: KIPSLVDLCVNKAIDNLRFLGDVGETDFHLLERILPHCTVDQLMHVEKSSEGRDLTPVTDKLWKKFYERQFGRENTNTVIERMQQKRV-AFRWIQLYEAK
K PSLVDLCV KAIDN++++G VG DF LLE+IL HCT++QL H+E +++ DL+P+TDK WK FY++ +G E+ +IE ++ +V F+W LYE K
Subjt: KIPSLVDLCVNKAIDNLRFLGDVGETDFHLLERILPHCTVDQLMHVEKSSEGRDLTPVTDKLWKKFYERQFGRENTNTVIERMQQKRV-AFRWIQLYEAK
Query: MKDIEKNESKAADRIKQSYLKENARKQSRQIQICSKVPPSSNKRSF-GGTGYGCNVANTKNKLLKKAKIEVLQSQEMKNIKAWRRNAVQKSSDIPSTKKP
+ +++ E + R+K+ Y EN RKQSRQ ++CSK PPS KR F G + G N+ + K+ ++KKAKI++L+SQE+KN+ A +RN +QKS I + K+
Subjt: MKDIEKNESKAADRIKQSYLKENARKQSRQIQICSKVPPSSNKRSF-GGTGYGCNVANTKNKLLKKAKIEVLQSQEMKNIKAWRRNAVQKSSDIPSTKKP
Query: MFSGRDSASTSKN
S ++ STS++
Subjt: MFSGRDSASTSKN
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